CircRNA Information

General Information
circRNA Basic Information
CircID chr7:44111952|44112188
Strand -
CircType exon
Host Gene ENSG00000106624.7;
Algorism CIRI2;
Sequence CGCGATGGGAACCCACGTGTGCGCAGCCTGGTGCAGGACACACGCATCCACCTGGTGCCCTCACTGAACCCTGATGGCTACGAGGTGGCAGCGCAGATGGTGGGTTGAAGGGTGAGGCTGGCCAGGGTCCAGGCAGCTGGGGGTTGTGGGGGTGTGGGTAGCCGATGCCTACCCTGCTGGCTCCCCACAGGGCTCAGAGTTTGGGAACTGGGCGCTGGGACTGTGGACTGAGGAGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:44111952|44112188 hsa-miR-22-5p 0 0 1
chr7:44111952|44112188 hsa-miR-22-3p 0 0 1
chr7:44111952|44112188 hsa-miR-214-5p 0 0 1
chr7:44111952|44112188 hsa-miR-214-3p 0 0 1
chr7:44111952|44112188 hsa-miR-504-5p 0 0 1
chr7:44111952|44112188 hsa-miR-504-3p 0 0 1
chr7:44111952|44112188 hsa-miR-604 0 0 1
chr7:44111952|44112188 hsa-miR-661 1 1 1
chr7:44111952|44112188 hsa-miR-939-5p 0 0 1
chr7:44111952|44112188 hsa-miR-939-3p 0 0 1
chr7:44111952|44112188 hsa-miR-1225-3p 0 0 1
chr7:44111952|44112188 hsa-miR-491-5p 0 0 1
chr7:44111952|44112188 hsa-miR-767-5p 0 0 1
chr7:44111952|44112188 hsa-miR-146b-3p 0 1 1
chr7:44111952|44112188 hsa-miR-361-3p 0 1 1
chr7:44111952|44112188 hsa-miR-455-3p 0 0 1
chr7:44111952|44112188 hsa-miR-1233 0 0 1
chr7:44111952|44112188 hsa-miR-1254 0 0 1
chr7:44111952|44112188 hsa-miR-346 1 0 0
chr7:44111952|44112188 hsa-miR-761 0 1 0
chr7:44111952|44112188 hsa-miR-940 1 0 0
chr7:44111952|44112188 hsa-miR-3165 0 1 0
chr7:44111952|44112188 hsa-miR-4264 0 1 0
chr7:44111952|44112188 hsa-miR-4530 0 1 0
chr7:44111952|44112188 hsa-miR-4721 1 0 0
chr7:44111952|44112188 hsa-miR-5193 1 1 0
chr7:44111952|44112188 hsa-miR-12114 0 1 0
chr7:44111952|44112188 hsa-miR-4435 0 1 0
chr7:44111952|44112188 hsa-miR-1233-3p 0 1 0
chr7:44111952|44112188 hsa-miR-486-5p 0 1 0
chr7:44111952|44112188 hsa-miR-6510-5p 0 1 0
chr7:44111952|44112188 hsa-miR-505-5p 0 1 0
chr7:44111952|44112188 hsa-miR-6806-5p 1 1 0
chr7:44111952|44112188 hsa-miR-191-3p 0 1 0
chr7:44111952|44112188 hsa-miR-4725-5p 1 1 0
chr7:44111952|44112188 hsa-miR-6827-5p 0 1 0
chr7:44111952|44112188 hsa-miR-3130-3p 0 1 0
chr7:44111952|44112188 hsa-miR-6882-3p 0 1 0
chr7:44111952|44112188 hsa-miR-1226-5p 1 1 0
chr7:44111952|44112188 hsa-miR-6803-3p 1 0 0
chr7:44111952|44112188 hsa-miR-4715-3p 0 1 0
chr7:44111952|44112188 hsa-miR-6823-5p 0 1 0
chr7:44111952|44112188 hsa-miR-4667-3p 0 1 0
chr7:44111952|44112188 hsa-miR-3690 0 1 0
chr7:44111952|44112188 hsa-miR-4733-3p 0 1 0
chr7:44111952|44112188 hsa-miR-3616-3p 0 1 0
chr7:44111952|44112188 hsa-miR-3190-5p 1 1 0
chr7:44111952|44112188 hsa-miR-7160-3p 1 0 0
chr7:44111952|44112188 hsa-miR-6813-3p 0 1 0
chr7:44111952|44112188 hsa-miR-6730-3p 1 0 0
chr7:44111952|44112188 hsa-miR-4758-3p 1 0 0
chr7:44111952|44112188 hsa-miR-6755-5p 0 1 0
chr7:44111952|44112188 hsa-miR-6798-3p 0 1 0
chr7:44111952|44112188 hsa-miR-1249-3p 0 1 0
chr7:44111952|44112188 hsa-miR-676-5p 0 1 0
chr7:44111952|44112188 hsa-miR-6750-3p 0 1 0
chr7:44111952|44112188 hsa-miR-4714-5p 0 1 0
chr7:44111952|44112188 hsa-miR-4738-5p 0 1 0
chr7:44111952|44112188 hsa-miR-6763-5p 0 1 0
chr7:44111952|44112188 hsa-miR-6754-3p 1 0 0
chr7:44111952|44112188 hsa-miR-3116 0 1 0
chr7:44111952|44112188 hsa-miR-6877-3p 1 0 0
chr7:44111952|44112188 hsa-miR-6511a-3p 1 1 0
chr7:44111952|44112188 hsa-miR-6784-3p 1 1 0
chr7:44111952|44112188 hsa-miR-6792-3p 1 0 0
chr7:44111952|44112188 hsa-miR-10401-3p 1 0 0
chr7:44111952|44112188 hsa-miR-6511b-3p 1 0 0
chr7:44111952|44112188 hsa-miR-1234-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr7:44111952|44112188
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MVQDTRIHLVPSLNPDGYEVAAQMVG
Nucleotide Sequence CTGGTGCAGGACACACGCATCCACCTGGTGCCCTCACTGAACCCTGATGGCTACGAGGTGGCAGCGCAGATGGTGGGTTGA

CircID chr7:44111952|44112188
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MARVQAAGGCGGVGSRCLPCWLPTGLRVWELGAGTVD
Nucleotide Sequence CTGGCCAGGGTCCAGGCAGCTGGGGGTTGTGGGGGTGTGGGTAGCCGATGCCTACCCTGCTGGCTCCCCACAGGGCTCAGAGTTTGGGAACTGGGCGCTGGGACTGTGGACTGA

CircID chr7:44111952|44112188
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MGVVGVWVADAYPAGSPQGSEFGNWALGLWTEE
Nucleotide Sequence CTGGGGGTTGTGGGGGTGTGGGTAGCCGATGCCTACCCTGCTGGCTCCCCACAGGGCTCAGAGTTTGGGAACTGGGCGCTGGGACTGTGGACTGAGGAG

CircID chr7:44111952|44112188
ORF Type ORF4
Protein Length 39
Nucleotide Length 120
Protein Sequence MSPVGSQQGRHRLPTPPQPPAAWTLASLTLQPTICAATS
Nucleotide Sequence CTGAGCCCTGTGGGGAGCCAGCAGGGTAGGCATCGGCTACCCACACCCCCACAACCCCCAGCTGCCTGGACCCTGGCCAGCCTCACCCTTCAACCCACCATCTGCGCTGCCACCTCGTAG

CircID chr7:44111952|44112188
ORF Type ORF5
Protein Length 63
Nucleotide Length 189
Protein Sequence MWGASRVGIGYPHPHNPQLPGPWPASPFNPPSALPPRSHQGSVRAPGGCVCPAPGCAHVGSHR
Nucleotide Sequence CTGTGGGGAGCCAGCAGGGTAGGCATCGGCTACCCACACCCCCACAACCCCCAGCTGCCTGGACCCTGGCCAGCCTCACCCTTCAACCCACCATCTGCGCTGCCACCTCGTAGCCATCAGGGTTCAGTGAGGGCACCAGGTGGATGCGTGTGTCCTGCACCAGGCTGCGCACACGTGGGTTCCCATCGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites