CircRNA Information

General Information
circRNA Basic Information
CircID chr7:44112860|44113109
Strand -
CircType exon
Host Gene ENSG00000106624.7;
Algorism CIRI2;
Sequence CGGCGGCATGGGCATCGTCAACGGGGCCAAGTGGAACCCCCGGACCGGGAGTGAGTCAGCCTGGGAGGGGCTGTGGGCGGGGCCTGGTCCGGAGAGGGGCTGACTTTGGGTCTGTATCTGTCCCCGGCCAGCTATCAATGACTTCAGTTACCTGCATACCAACTGCCTGGAGCTCTCCTTCTACCTGGGCTGTGACAAGTTCCCTCATGAGAGTGAGCTGCCCCGCGAGTGGGAGAACAACAAGGAGGCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:44112860|44113109 hsa-miR-150-5p 0 0 1
chr7:44112860|44113109 hsa-miR-150-3p 0 0 1
chr7:44112860|44113109 hsa-miR-328-5p 0 0 1
chr7:44112860|44113109 hsa-miR-328-3p 0 0 1
chr7:44112860|44113109 hsa-miR-345-5p 0 0 1
chr7:44112860|44113109 hsa-miR-345-3p 0 0 1
chr7:44112860|44113109 hsa-miR-616-5p 0 0 1
chr7:44112860|44113109 hsa-miR-616-3p 0 0 1
chr7:44112860|44113109 hsa-miR-657 0 0 1
chr7:44112860|44113109 hsa-miR-744-5p 0 0 1
chr7:44112860|44113109 hsa-miR-744-3p 0 0 1
chr7:44112860|44113109 hsa-miR-1281 0 0 1
chr7:44112860|44113109 hsa-miR-486-3p 0 1 1
chr7:44112860|44113109 hsa-miR-532-3p 0 1 1
chr7:44112860|44113109 hsa-miR-483-3p 0 0 1
chr7:44112860|44113109 hsa-miR-449a 1 0 0
chr7:44112860|44113109 hsa-miR-648 1 0 0
chr7:44112860|44113109 hsa-miR-3132 1 1 0
chr7:44112860|44113109 hsa-miR-3154 1 1 0
chr7:44112860|44113109 hsa-miR-3937 1 0 0
chr7:44112860|44113109 hsa-miR-3943 1 0 0
chr7:44112860|44113109 hsa-miR-4440 1 0 0
chr7:44112860|44113109 hsa-miR-4471 0 1 0
chr7:44112860|44113109 hsa-miR-4641 0 1 0
chr7:44112860|44113109 hsa-miR-4673 1 0 0
chr7:44112860|44113109 hsa-miR-4692 1 1 0
chr7:44112860|44113109 hsa-miR-4721 1 1 0
chr7:44112860|44113109 hsa-miR-5090 1 1 0
chr7:44112860|44113109 hsa-miR-5192 1 0 0
chr7:44112860|44113109 hsa-miR-5683 0 1 0
chr7:44112860|44113109 hsa-miR-6075 1 0 0
chr7:44112860|44113109 hsa-miR-8089 1 0 0
chr7:44112860|44113109 hsa-miR-12122 0 1 0
chr7:44112860|44113109 hsa-miR-1273h-3p 1 0 0
chr7:44112860|44113109 hsa-miR-6892-3p 0 1 0
chr7:44112860|44113109 hsa-miR-6854-5p 0 1 0
chr7:44112860|44113109 hsa-miR-6727-5p 1 0 0
chr7:44112860|44113109 hsa-miR-23b-5p 0 1 0
chr7:44112860|44113109 hsa-miR-4728-3p 1 0 0
chr7:44112860|44113109 hsa-miR-1292-5p 1 0 0
chr7:44112860|44113109 hsa-miR-6888-5p 1 0 0
chr7:44112860|44113109 hsa-miR-4713-5p 0 1 0
chr7:44112860|44113109 hsa-miR-5088-5p 1 1 0
chr7:44112860|44113109 hsa-miR-4763-5p 1 0 0
chr7:44112860|44113109 hsa-miR-7108-3p 1 1 0
chr7:44112860|44113109 hsa-miR-1247-5p 1 0 0
chr7:44112860|44113109 hsa-miR-4707-3p 1 0 0
chr7:44112860|44113109 hsa-miR-4650-3p 0 1 0
chr7:44112860|44113109 hsa-miR-3614-5p 0 1 0
chr7:44112860|44113109 hsa-miR-6736-3p 0 1 0
chr7:44112860|44113109 hsa-miR-6769a-3p 0 1 0
chr7:44112860|44113109 hsa-miR-103b 0 1 0
chr7:44112860|44113109 hsa-miR-6743-3p 1 0 0
chr7:44112860|44113109 hsa-miR-4758-3p 1 0 0
chr7:44112860|44113109 hsa-miR-6752-3p 1 0 0
chr7:44112860|44113109 hsa-miR-34a-5p 1 0 0
chr7:44112860|44113109 hsa-miR-4749-3p 0 1 0
chr7:44112860|44113109 hsa-miR-6794-3p 0 1 0
chr7:44112860|44113109 hsa-miR-7158-5p 1 0 0
chr7:44112860|44113109 hsa-miR-3680-5p 0 1 0
chr7:44112860|44113109 hsa-miR-449c-5p 1 1 0
chr7:44112860|44113109 hsa-miR-4749-5p 1 0 0
chr7:44112860|44113109 hsa-miR-6831-5p 0 1 0
chr7:44112860|44113109 hsa-miR-939-5p 1 1 0
chr7:44112860|44113109 hsa-miR-34b-5p 0 1 0
chr7:44112860|44113109 hsa-miR-10396a-3p 1 0 0
chr7:44112860|44113109 hsa-miR-10396b-3p 1 0 0
chr7:44112860|44113109 hsa-miR-6791-3p 1 1 0
chr7:44112860|44113109 hsa-miR-324-3p 1 0 0
chr7:44112860|44113109 hsa-miR-6876-5p 1 0 0
chr7:44112860|44113109 hsa-miR-6822-5p 0 1 0
chr7:44112860|44113109 hsa-miR-6829-3p 0 1 0
chr7:44112860|44113109 hsa-miR-6775-3p 1 1 0
chr7:44112860|44113109 hsa-miR-10392-3p 1 1 0
chr7:44112860|44113109 hsa-miR-7114-3p 1 0 0
chr7:44112860|44113109 hsa-miR-449b-5p 1 0 0
chr7:44112860|44113109 hsa-miR-4690-3p 0 1 0
chr7:44112860|44113109 hsa-miR-2682-5p 0 1 0
chr7:44112860|44113109 hsa-miR-7156-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr7:44112860|44113109
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MGGAVGGAWSGEGLTLGLYLSPASYQ
Nucleotide Sequence CTGGGAGGGGCTGTGGGCGGGGCCTGGTCCGGAGAGGGGCTGACTTTGGGTCTGTATCTGTCCCCGGCCAGCTATCAATGA
CircID chr7:44112860|44113109
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MGIVNGAKWNPRTGSESAWEGLWAGPGPERG
Nucleotide Sequence ATGGGCATCGTCAACGGGGCCAAGTGGAACCCCCGGACCGGGAGTGAGTCAGCCTGGGAGGGGCTGTGGGCGGGGCCTGGTCCGGAGAGGGGCTGA
CircID chr7:44112860|44113109
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MHTNCLELSFYLGCDKFPHESELPREWENNKEA
Nucleotide Sequence CTGCATACCAACTGCCTGGAGCTCTCCTTCTACCTGGGCTGTGACAAGTTCCCTCATGAGAGTGAGCTGCCCCGCGAGTGGGAGAACAACAAGGAGGCG
CircID chr7:44112860|44113109
ORF Type ORF4
Protein Length 55
Nucleotide Length 165
Protein Sequence MVRRGADFGSVSVPGQLSMTSVTCIPTAWSSPSTWAVTSSLMRVSCPASGRTTRR
Nucleotide Sequence CTGGTCCGGAGAGGGGCTGACTTTGGGTCTGTATCTGTCCCCGGCCAGCTATCAATGACTTCAGTTACCTGCATACCAACTGCCTGGAGCTCTCCTTCTACCTGGGCTGTGACAAGTTCCCTCATGAGAGTGAGCTGCCCCGCGAGTGGGAGAACAACAAGGAGG
CircID chr7:44112860|44113109
ORF Type ORF5
Protein Length 50
Nucleotide Length 153
Protein Sequence MRELVTAQVEGELQAVGMQVTEVIDSWPGTDTDPKSAPLRTRPRPQPLPG
Nucleotide Sequence ATGAGGGAACTTGTCACAGCCCAGGTAGAAGGAGAGCTCCAGGCAGTTGGTATGCAGGTAACTGAAGTCATTGATAGCTGGCCGGGGACAGATACAGACCCAAAGTCAGCCCCTCTCCGGACCAGGCCCCGCCCACAGCCCCTCCCAGGCTGA
CircID chr7:44112860|44113109
ORF Type ORF6
Protein Length 49
Nucleotide Length 147
Protein Sequence MKSLIAGRGQIQTQSQPLSGPGPAHSPSQADSLPVRGFHLAPLTMPMPP
Nucleotide Sequence CTGAAGTCATTGATAGCTGGCCGGGGACAGATACAGACCCAAAGTCAGCCCCTCTCCGGACCAGGCCCCGCCCACAGCCCCTCCCAGGCTGACTCACTCCCGGTCCGGGGGTTCCACTTGGCCCCGTTGACGATGCCCATGCCGCCG
CircID chr7:44112860|44113109
ORF Type ORF7
Protein Length 37
Nucleotide Length 114
Protein Sequence MAGDRYRPKVSPSPDQAPPTAPPRLTHSRSGGSTWPR
Nucleotide Sequence CTGGCCGGGGACAGATACAGACCCAAAGTCAGCCCCTCTCCGGACCAGGCCCCGCCCACAGCCCCTCCCAGGCTGACTCACTCCCGGTCCGGGGGTTCCACTTGGCCCCGTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab