CircRNA Information

General Information
circRNA Basic Information
CircID chr7:44675178|44676001
Strand +
CircType exon
Host Gene ENSG00000105953.13;
Algorism CIRI2;
Sequence ATGCCCAGGTGGTACTTCACATCTCCGGAGCCCTCATCAGCTGCCTCCAGCTTTGAATCGAATTGACAGAAGATCTGTTCCAGCTCCTTCCTGATGACATTTGCAAGCACGTTCAGCCGCCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:44675178|44676001 hsa-miR-320a-5p 0 0 1
chr7:44675178|44676001 hsa-miR-320a-3p 0 0 1
chr7:44675178|44676001 hsa-miR-527 0 0 1
chr7:44675178|44676001 hsa-miR-612 0 0 1
chr7:44675178|44676001 hsa-miR-636 0 0 1
chr7:44675178|44676001 hsa-miR-650 0 1 1
chr7:44675178|44676001 hsa-miR-708-5p 0 0 1
chr7:44675178|44676001 hsa-miR-708-3p 0 0 1
chr7:44675178|44676001 hsa-miR-873-5p 0 0 1
chr7:44675178|44676001 hsa-miR-873-3p 0 0 1
chr7:44675178|44676001 hsa-miR-1203 0 0 1
chr7:44675178|44676001 hsa-miR-1827 0 0 1
chr7:44675178|44676001 hsa-miR-330-3p 0 0 1
chr7:44675178|44676001 hsa-miR-28-5p 0 1 1
chr7:44675178|44676001 hsa-miR-576-3p 0 0 1
chr7:44675178|44676001 hsa-miR-320b 1 1 1
chr7:44675178|44676001 hsa-miR-320c 0 1 1
chr7:44675178|44676001 hsa-miR-320d 0 0 1
chr7:44675178|44676001 hsa-miR-518a-5p 0 0 1
chr7:44675178|44676001 hsa-miR-1285 0 0 1
chr7:44675178|44676001 hsa-miR-3139 0 1 0
chr7:44675178|44676001 hsa-miR-3141 0 1 0
chr7:44675178|44676001 hsa-miR-3612 0 1 0
chr7:44675178|44676001 hsa-miR-3652 1 0 0
chr7:44675178|44676001 hsa-miR-4429 0 1 0
chr7:44675178|44676001 hsa-miR-4430 1 0 0
chr7:44675178|44676001 hsa-miR-3135b 0 1 0
chr7:44675178|44676001 hsa-miR-4467 1 0 0
chr7:44675178|44676001 hsa-miR-4476 0 1 0
chr7:44675178|44676001 hsa-miR-4533 0 1 0
chr7:44675178|44676001 hsa-miR-4539 1 0 0
chr7:44675178|44676001 hsa-miR-4688 1 0 0
chr7:44675178|44676001 hsa-miR-4721 1 1 0
chr7:44675178|44676001 hsa-miR-5090 1 0 0
chr7:44675178|44676001 hsa-miR-8075 0 1 0
chr7:44675178|44676001 hsa-miR-4687-3p 1 0 0
chr7:44675178|44676001 hsa-miR-6820-5p 1 0 0
chr7:44675178|44676001 hsa-miR-4474-3p 1 0 0
chr7:44675178|44676001 hsa-miR-6829-5p 1 0 0
chr7:44675178|44676001 hsa-miR-23a-5p 1 1 0
chr7:44675178|44676001 hsa-miR-1224-5p 1 0 0
chr7:44675178|44676001 hsa-miR-6874-5p 1 1 0
chr7:44675178|44676001 hsa-miR-5088-5p 0 1 0
chr7:44675178|44676001 hsa-miR-1226-5p 0 1 0
chr7:44675178|44676001 hsa-miR-4743-3p 0 1 0
chr7:44675178|44676001 hsa-miR-516b-5p 0 1 0
chr7:44675178|44676001 hsa-miR-6770-3p 1 0 0
chr7:44675178|44676001 hsa-miR-5585-5p 0 1 0
chr7:44675178|44676001 hsa-miR-10400-5p 1 0 0
chr7:44675178|44676001 hsa-miR-4763-3p 1 0 0
chr7:44675178|44676001 hsa-miR-6769b-5p 1 0 0
chr7:44675178|44676001 hsa-miR-5001-5p 1 0 0
chr7:44675178|44676001 hsa-miR-328-5p 1 0 0
chr7:44675178|44676001 hsa-miR-6846-5p 1 0 0
chr7:44675178|44676001 hsa-miR-6848-5p 1 0 0
chr7:44675178|44676001 hsa-miR-939-5p 1 0 0
chr7:44675178|44676001 hsa-miR-1914-3p 1 0 0
chr7:44675178|44676001 hsa-miR-6876-5p 0 1 0
chr7:44675178|44676001 hsa-miR-363-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr7:44675178|44676001
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence MNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLG
Nucleotide Sequence CTGAACGTGCTTGCAAATGTCATCAGGAAGGAGCTGGAACAGATCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCTGATGAGGGCTCCGGAGATGTGAAGTACCACCTGGGC

CircID chr7:44675178|44676001
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MQMSSGRSWNRSSVNSIQSWRQLMRAPEM
Nucleotide Sequence TTGCAAATGTCATCAGGAAGGAGCTGGAACAGATCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCTGATGAGGGCTCCGGAGATGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites