CircRNA Information

General Information
circRNA Basic Information
CircID chr7:45101512|45101897
Strand -
CircType exon
Host Gene ENSG00000136270.12;
Algorism CIRI2;
Sequence CCTGGAGGTGGTGACTGGCTCCCAGTTGGCTGGGCAAGGTGAGGTGCCACAAAGTCCCTTACGGGCAGAAACTCGCCGTCACTGTCCAGCAGCACCTCAGCATCTGGGGAAGGGGTGTGGGATGAGAACATGTTGGGGGACATCCCTCAGAAACCCCCCCACAGGAAAGATGAACAAAGATGGGACTGTGGGGAGCCCAGGCTGACACCCTGCAGCTCCCTAGGTCAGTACTTGCTGCAGACGGGGTGGGTTAGAAGAGTCCCGTTAGACTCAGGCAATGCCAGGCCCTGTGCCAACCAGGGGGAGCCCTCACCCAGCACCCAGCCATACTGCGTGGCCACCTCGAGGCTGCCCTTGTCGGCGCTCCCCAGCAGCCCCTTCAGCGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:45101512|45101897 hsa-miR-96-5p 0 0 1
chr7:45101512|45101897 hsa-miR-96-3p 0 0 1
chr7:45101512|45101897 hsa-miR-107 0 0 1
chr7:45101512|45101897 hsa-miR-192-5p 0 0 1
chr7:45101512|45101897 hsa-miR-192-3p 0 0 1
chr7:45101512|45101897 hsa-miR-197-5p 0 0 1
chr7:45101512|45101897 hsa-miR-197-3p 0 0 1
chr7:45101512|45101897 hsa-miR-215-5p 0 0 1
chr7:45101512|45101897 hsa-miR-215-3p 0 0 1
chr7:45101512|45101897 hsa-miR-375-5p 0 0 1
chr7:45101512|45101897 hsa-miR-375-3p 0 0 1
chr7:45101512|45101897 hsa-miR-135b-5p 0 0 1
chr7:45101512|45101897 hsa-miR-135b-3p 0 0 1
chr7:45101512|45101897 hsa-miR-558 0 0 1
chr7:45101512|45101897 hsa-miR-575 0 0 1
chr7:45101512|45101897 hsa-miR-588 0 0 1
chr7:45101512|45101897 hsa-miR-627-5p 0 0 1
chr7:45101512|45101897 hsa-miR-627-3p 0 0 1
chr7:45101512|45101897 hsa-miR-661 1 1 1
chr7:45101512|45101897 hsa-miR-1271-5p 0 0 1
chr7:45101512|45101897 hsa-miR-1271-3p 0 0 1
chr7:45101512|45101897 hsa-miR-920 0 1 1
chr7:45101512|45101897 hsa-miR-924 0 0 1
chr7:45101512|45101897 hsa-miR-939-5p 0 0 1
chr7:45101512|45101897 hsa-miR-939-3p 0 0 1
chr7:45101512|45101897 hsa-miR-1205 0 1 1
chr7:45101512|45101897 hsa-miR-1206 0 0 1
chr7:45101512|45101897 hsa-miR-1287-5p 0 0 1
chr7:45101512|45101897 hsa-miR-1287-3p 0 0 1
chr7:45101512|45101897 hsa-miR-1256 0 0 1
chr7:45101512|45101897 hsa-miR-1262 0 0 1
chr7:45101512|45101897 hsa-miR-1278 0 0 1
chr7:45101512|45101897 hsa-miR-1321 0 0 1
chr7:45101512|45101897 hsa-miR-491-5p 0 0 1
chr7:45101512|45101897 hsa-miR-1184 0 1 1
chr7:45101512|45101897 hsa-miR-339-3p 0 1 1
chr7:45101512|45101897 hsa-miR-361-3p 0 1 1
chr7:45101512|45101897 hsa-miR-331-3p 0 0 1
chr7:45101512|45101897 hsa-miR-188-3p 0 0 1
chr7:45101512|45101897 hsa-miR-324-3p 0 0 1
chr7:45101512|45101897 hsa-miR-220b 0 0 1
chr7:45101512|45101897 hsa-miR-103 0 0 1
chr7:45101512|45101897 hsa-miR-220c 0 0 1
chr7:45101512|45101897 hsa-miR-135a 0 0 1
chr7:45101512|45101897 hsa-miR-544 0 0 1
chr7:45101512|45101897 hsa-miR-1201 0 0 1
chr7:45101512|45101897 hsa-miR-346 1 0 0
chr7:45101512|45101897 hsa-miR-608 1 0 0
chr7:45101512|45101897 hsa-miR-638 1 0 0
chr7:45101512|45101897 hsa-miR-663a 1 0 0
chr7:45101512|45101897 hsa-miR-657 1 0 0
chr7:45101512|45101897 hsa-miR-762 1 0 0
chr7:45101512|45101897 hsa-miR-935 0 1 0
chr7:45101512|45101897 hsa-miR-663b 1 0 0
chr7:45101512|45101897 hsa-miR-1913 1 0 0
chr7:45101512|45101897 hsa-miR-2861 0 1 0
chr7:45101512|45101897 hsa-miR-3137 1 0 0
chr7:45101512|45101897 hsa-miR-3138 0 1 0
chr7:45101512|45101897 hsa-miR-3154 1 0 0
chr7:45101512|45101897 hsa-miR-4300 1 0 0
chr7:45101512|45101897 hsa-miR-4421 0 1 0
chr7:45101512|45101897 hsa-miR-4505 0 1 0
chr7:45101512|45101897 hsa-miR-4656 1 0 0
chr7:45101512|45101897 hsa-miR-4710 0 1 0
chr7:45101512|45101897 hsa-miR-4721 0 1 0
chr7:45101512|45101897 hsa-miR-4734 0 1 0
chr7:45101512|45101897 hsa-miR-4741 1 0 0
chr7:45101512|45101897 hsa-miR-5787 1 1 0
chr7:45101512|45101897 hsa-miR-6085 1 1 0
chr7:45101512|45101897 hsa-miR-8089 0 1 0
chr7:45101512|45101897 hsa-miR-12119 1 0 0
chr7:45101512|45101897 hsa-miR-150-3p 1 1 0
chr7:45101512|45101897 hsa-miR-4731-5p 0 1 0
chr7:45101512|45101897 hsa-miR-3150a-3p 0 1 0
chr7:45101512|45101897 hsa-miR-6861-5p 1 0 0
chr7:45101512|45101897 hsa-miR-6825-5p 1 0 0
chr7:45101512|45101897 hsa-miR-4687-3p 1 1 0
chr7:45101512|45101897 hsa-miR-3692-5p 0 1 0
chr7:45101512|45101897 hsa-miR-6880-5p 1 0 0
chr7:45101512|45101897 hsa-miR-7160-5p 1 1 0
chr7:45101512|45101897 hsa-miR-6741-5p 1 1 0
chr7:45101512|45101897 hsa-miR-3187-3p 1 0 0
chr7:45101512|45101897 hsa-miR-3189-5p 1 0 0
chr7:45101512|45101897 hsa-miR-5589-5p 0 1 0
chr7:45101512|45101897 hsa-miR-6776-5p 1 1 0
chr7:45101512|45101897 hsa-miR-1915-5p 0 1 0
chr7:45101512|45101897 hsa-miR-6829-5p 1 1 0
chr7:45101512|45101897 hsa-miR-6805-5p 1 1 0
chr7:45101512|45101897 hsa-miR-1226-5p 0 1 0
chr7:45101512|45101897 hsa-miR-1247-5p 1 0 0
chr7:45101512|45101897 hsa-miR-3944-3p 1 0 0
chr7:45101512|45101897 hsa-miR-193b-5p 0 1 0
chr7:45101512|45101897 hsa-miR-296-3p 1 0 0
chr7:45101512|45101897 hsa-miR-3162-5p 0 1 0
chr7:45101512|45101897 hsa-miR-6870-3p 1 1 0
chr7:45101512|45101897 hsa-miR-1250-5p 0 1 0
chr7:45101512|45101897 hsa-miR-2355-5p 0 1 0
chr7:45101512|45101897 hsa-miR-6738-3p 1 0 0
chr7:45101512|45101897 hsa-miR-3151-3p 1 0 0
chr7:45101512|45101897 hsa-miR-1285-5p 0 1 0
chr7:45101512|45101897 hsa-miR-4433a-5p 1 0 0
chr7:45101512|45101897 hsa-miR-4750-3p 1 1 0
chr7:45101512|45101897 hsa-miR-219b-5p 0 1 0
chr7:45101512|45101897 hsa-miR-3200-3p 0 1 0
chr7:45101512|45101897 hsa-miR-431-3p 1 0 0
chr7:45101512|45101897 hsa-miR-576-5p 0 1 0
chr7:45101512|45101897 hsa-miR-4763-3p 1 0 0
chr7:45101512|45101897 hsa-miR-6865-5p 1 0 0
chr7:45101512|45101897 hsa-miR-1343-5p 1 1 0
chr7:45101512|45101897 hsa-miR-6726-5p 1 1 0
chr7:45101512|45101897 hsa-miR-6743-5p 1 1 0
chr7:45101512|45101897 hsa-miR-6756-5p 1 0 0
chr7:45101512|45101897 hsa-miR-6769a-5p 1 0 0
chr7:45101512|45101897 hsa-miR-6803-5p 1 0 0
chr7:45101512|45101897 hsa-miR-6815-5p 0 1 0
chr7:45101512|45101897 hsa-miR-6763-5p 0 1 0
chr7:45101512|45101897 hsa-miR-3127-3p 1 1 0
chr7:45101512|45101897 hsa-miR-328-5p 1 0 0
chr7:45101512|45101897 hsa-miR-4632-5p 1 1 0
chr7:45101512|45101897 hsa-miR-6846-5p 1 1 0
chr7:45101512|45101897 hsa-miR-6848-5p 1 0 0
chr7:45101512|45101897 hsa-miR-4436b-3p 0 1 0
chr7:45101512|45101897 hsa-miR-6885-5p 1 0 0
chr7:45101512|45101897 hsa-miR-365a-5p 0 1 0
chr7:45101512|45101897 hsa-miR-365b-5p 0 1 0
chr7:45101512|45101897 hsa-miR-6736-5p 1 1 0
chr7:45101512|45101897 hsa-miR-4700-5p 0 1 0
chr7:45101512|45101897 hsa-miR-4472 0 1 0
chr7:45101512|45101897 hsa-miR-4667-5p 0 1 0
chr7:45101512|45101897 hsa-miR-10398-5p 0 1 0
chr7:45101512|45101897 hsa-miR-6756-3p 0 1 0
chr7:45101512|45101897 hsa-miR-6784-3p 1 0 0
chr7:45101512|45101897 hsa-miR-10400-3p 0 1 0
chr7:45101512|45101897 hsa-miR-6718-5p 1 0 0
chr7:45101512|45101897 hsa-miR-6891-3p 0 1 0
chr7:45101512|45101897 hsa-miR-7114-3p 0 1 0
chr7:45101512|45101897 hsa-miR-6500-5p 1 0 0
chr7:45101512|45101897 hsa-miR-412-3p 0 1 0
chr7:45101512|45101897 hsa-miR-4720-5p 0 1 0
chr7:45101512|45101897 hsa-miR-4704-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:45101512|45101897
ORF Type ORF1
Protein Length 101
Nucleotide Length 303
Protein Sequence MSSSTSASGEGVWDENMLGDIPQKPPHRKDEQRWDCGEPRLTPCSSLGQYLLQTGWVRRVPLDSGNARPCANQGEPSPSTQPYCVATSRLPLSALPSSPFS
Nucleotide Sequence CTGTCCAGCAGCACCTCAGCATCTGGGGAAGGGGTGTGGGATGAGAACATGTTGGGGGACATCCCTCAGAAACCCCCCCACAGGAAAGATGAACAAAGATGGGACTGTGGGGAGCCCAGGCTGACACCCTGCAGCTCCCTAGGTCAGTACTTGCTGCAGACGGGGTGGGTTAGAAGAGTCCCGTTAGACTCAGGCAATGCCAGGCCCTGTGCCAACCAGGGGGAGCCCTCACCCAGCACCCAGCCATACTGCGTGGCCACCTCGAGGCTGCCCTTGTCGGCGCTCCCCAGCAGCCCCTTCAGC
CircID chr7:45101512|45101897
ORF Type ORF2
Protein Length 67
Nucleotide Length 204
Protein Sequence LEVVTGSQLAGQGEVPQSPLRAETRRHCPAAPQHLGKGCGMRTCWGTSLRNPPTGKMNKDGTVGSPG
Nucleotide Sequence CTGGAGGTGGTGACTGGCTCCCAGTTGGCTGGGCAAGGTGAGGTGCCACAAAGTCCCTTACGGGCAGAAACTCGCCGTCACTGTCCAGCAGCACCTCAGCATCTGGGGAAGGGGTGTGGGATGAGAACATGTTGGGGGACATCCCTCAGAAACCCCCCCACAGGAAAGATGAACAAAGATGGGACTGTGGGGAGCCCAGGCTGA
CircID chr7:45101512|45101897
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence MPGPVPTRGSPHPAPSHTAWPPRGCPCRRSPAAPSA
Nucleotide Sequence ATGCCAGGCCCTGTGCCAACCAGGGGGAGCCCTCACCCAGCACCCAGCCATACTGCGTGGCCACCTCGAGGCTGCCCTTGTCGGCGCTCCCCAGCAGCCCCTTCAGCG
CircID chr7:45101512|45101897
ORF Type ORF4
Protein Length 36
Nucleotide Length 111
Protein Sequence MAPSWLGKVRCHKVPYGQKLAVTVQQHLSIWGRGVG
Nucleotide Sequence CTGGCTCCCAGTTGGCTGGGCAAGGTGAGGTGCCACAAAGTCCCTTACGGGCAGAAACTCGCCGTCACTGTCCAGCAGCACCTCAGCATCTGGGGAAGGGGTGTGGGATGA
CircID chr7:45101512|45101897
ORF Type ORF5
Protein Length 33
Nucleotide Length 99
Protein Sequence MCQPGGALTQHPAILRGHLEAALVGAPQQPLQR
Nucleotide Sequence CTGTGCCAACCAGGGGGAGCCCTCACCCAGCACCCAGCCATACTGCGTGGCCACCTCGAGGCTGCCCTTGTCGGCGCTCCCCAGCAGCCCCTTCAGCGT
CircID chr7:45101512|45101897
ORF Type ORF6
Protein Length 52
Nucleotide Length 159
Protein Sequence MKGLLGSADKGSLEVATQYGWVLGEGSPWLAQGLALPESNGTLLTHPVCSKY
Nucleotide Sequence CTGAAGGGGCTGCTGGGGAGCGCCGACAAGGGCAGCCTCGAGGTGGCCACGCAGTATGGCTGGGTGCTGGGTGAGGGCTCCCCCTGGTTGGCACAGGGCCTGGCATTGCCTGAGTCTAACGGGACTCTTCTAACCCACCCCGTCTGCAGCAAGTACTGA
CircID chr7:45101512|45101897
ORF Type ORF7
Protein Length 47
Nucleotide Length 141
Protein Sequence MSPNMFSSHTPSPDAEVLLDSDGEFLPVRDFVAPHLAQPTGSQSPPP
Nucleotide Sequence ATGTCCCCCAACATGTTCTCATCCCACACCCCTTCCCCAGATGCTGAGGTGCTGCTGGACAGTGACGGCGAGTTTCTGCCCGTAAGGGACTTTGTGGCACCTCACCTTGCCCAGCCAACTGGGAGCCAGTCACCACCTCCA
CircID chr7:45101512|45101897
ORF Type ORF8
Protein Length 25
Nucleotide Length 78
Protein Sequence MAGCWVRAPPGWHRAWHCLSLTGLF
Nucleotide Sequence ATGGCTGGGTGCTGGGTGAGGGCTCCCCCTGGTTGGCACAGGGCCTGGCATTGCCTGAGTCTAACGGGACTCTTCTAA
CircID chr7:45101512|45101897
ORF Type ORF9
Protein Length 26
Nucleotide Length 81
Protein Sequence MFIFPVGGFLRDVPQHVLIPHPFPRC
Nucleotide Sequence TTGTTCATCTTTCCTGTGGGGGGGTTTCTGAGGGATGTCCCCCAACATGTTCTCATCCCACACCCCTTCCCCAGATGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab