CircRNA Information

General Information
circRNA Basic Information
CircID chr7:47276314|47276525
Strand -
CircType exon
Host Gene ENSG00000136205.15;
Algorism CIRI2;
Sequence GCACGCATGCACACACGCACACACACACAACACCCACTGTGATTTGGCTGCTTCCAACTCTGCCTGTTTCTAAGTTTTCCTCGGCCCCTCACTTTAAAGCAGAGTTCACAAAGCACATTCCCAAACCCCAGCTCCCTGACAGGAGCTTGTGACACCAGTGTGGCCTAAGAATGGGGGATTTGACTTTTGAAAGCAGAGGAGGGAATTTCGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:47276314|47276525 hsa-miR-17-5p 0 0 1
chr7:47276314|47276525 hsa-miR-17-3p 0 0 1
chr7:47276314|47276525 hsa-miR-20a-5p 0 0 1
chr7:47276314|47276525 hsa-miR-20a-3p 0 0 1
chr7:47276314|47276525 hsa-miR-27a-5p 0 0 1
chr7:47276314|47276525 hsa-miR-27a-3p 0 0 1
chr7:47276314|47276525 hsa-miR-93-5p 0 0 1
chr7:47276314|47276525 hsa-miR-93-3p 0 0 1
chr7:47276314|47276525 hsa-miR-106a-5p 0 0 1
chr7:47276314|47276525 hsa-miR-106a-3p 0 0 1
chr7:47276314|47276525 hsa-miR-210-5p 0 0 1
chr7:47276314|47276525 hsa-miR-210-3p 0 0 1
chr7:47276314|47276525 hsa-miR-27b-5p 0 0 1
chr7:47276314|47276525 hsa-miR-27b-3p 0 0 1
chr7:47276314|47276525 hsa-miR-206 0 0 1
chr7:47276314|47276525 hsa-miR-106b-5p 0 0 1
chr7:47276314|47276525 hsa-miR-106b-3p 0 0 1
chr7:47276314|47276525 hsa-miR-20b-5p 0 0 1
chr7:47276314|47276525 hsa-miR-20b-3p 0 0 1
chr7:47276314|47276525 hsa-miR-519d-5p 0 0 1
chr7:47276314|47276525 hsa-miR-519d-3p 0 0 1
chr7:47276314|47276525 hsa-miR-571 0 0 1
chr7:47276314|47276525 hsa-miR-597-5p 0 0 1
chr7:47276314|47276525 hsa-miR-597-3p 0 0 1
chr7:47276314|47276525 hsa-miR-605-5p 0 0 1
chr7:47276314|47276525 hsa-miR-605-3p 0 0 1
chr7:47276314|47276525 hsa-miR-607 0 0 1
chr7:47276314|47276525 hsa-miR-609 0 0 1
chr7:47276314|47276525 hsa-miR-613 0 0 1
chr7:47276314|47276525 hsa-miR-636 0 0 1
chr7:47276314|47276525 hsa-miR-758-5p 0 0 1
chr7:47276314|47276525 hsa-miR-758-3p 0 0 1
chr7:47276314|47276525 hsa-miR-920 0 0 1
chr7:47276314|47276525 hsa-miR-513b-5p 0 0 1
chr7:47276314|47276525 hsa-miR-513b-3p 0 0 1
chr7:47276314|47276525 hsa-miR-671-5p 0 0 1
chr7:47276314|47276525 hsa-miR-423-5p 1 0 1
chr7:47276314|47276525 hsa-miR-361-3p 0 0 1
chr7:47276314|47276525 hsa-miR-128 0 0 1
chr7:47276314|47276525 hsa-miR-642 0 0 1
chr7:47276314|47276525 hsa-miR-218 0 0 1
chr7:47276314|47276525 hsa-miR-1 0 0 1
chr7:47276314|47276525 hsa-miR-1295 0 0 1
chr7:47276314|47276525 hsa-miR-147 0 0 1
chr7:47276314|47276525 hsa-miR-601 1 0 0
chr7:47276314|47276525 hsa-miR-637 1 0 0
chr7:47276314|47276525 hsa-miR-762 1 0 0
chr7:47276314|47276525 hsa-miR-921 1 0 0
chr7:47276314|47276525 hsa-miR-297 1 0 0
chr7:47276314|47276525 hsa-miR-1294 1 0 0
chr7:47276314|47276525 hsa-miR-2861 1 0 0
chr7:47276314|47276525 hsa-miR-3132 1 0 0
chr7:47276314|47276525 hsa-miR-3174 1 0 0
chr7:47276314|47276525 hsa-miR-4270 1 0 0
chr7:47276314|47276525 hsa-miR-4466 1 0 0
chr7:47276314|47276525 hsa-miR-4508 1 0 0
chr7:47276314|47276525 hsa-miR-4537 1 0 0
chr7:47276314|47276525 hsa-miR-4656 1 0 0
chr7:47276314|47276525 hsa-miR-4675 1 0 0
chr7:47276314|47276525 hsa-miR-4688 1 0 0
chr7:47276314|47276525 hsa-miR-4706 1 0 0
chr7:47276314|47276525 hsa-miR-4710 1 0 0
chr7:47276314|47276525 hsa-miR-4721 1 0 0
chr7:47276314|47276525 hsa-miR-5194 1 0 0
chr7:47276314|47276525 hsa-miR-5787 1 0 0
chr7:47276314|47276525 hsa-miR-6085 1 0 0
chr7:47276314|47276525 hsa-miR-6090 1 0 0
chr7:47276314|47276525 hsa-miR-6133 1 0 0
chr7:47276314|47276525 hsa-miR-7704 1 0 0
chr7:47276314|47276525 hsa-miR-8089 1 0 0
chr7:47276314|47276525 hsa-miR-128-1-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6734-5p 1 0 0
chr7:47276314|47276525 hsa-miR-125a-3p 1 0 0
chr7:47276314|47276525 hsa-miR-5187-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6880-5p 1 0 0
chr7:47276314|47276525 hsa-miR-4655-5p 1 0 0
chr7:47276314|47276525 hsa-miR-197-5p 1 0 0
chr7:47276314|47276525 hsa-miR-3180-3p 1 0 0
chr7:47276314|47276525 hsa-miR-185-3p 1 0 0
chr7:47276314|47276525 hsa-miR-6732-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6805-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6798-5p 1 0 0
chr7:47276314|47276525 hsa-miR-942-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6782-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6728-3p 1 0 0
chr7:47276314|47276525 hsa-miR-7109-5p 1 0 0
chr7:47276314|47276525 hsa-miR-1226-5p 1 0 0
chr7:47276314|47276525 hsa-miR-4640-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6834-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6780a-3p 1 0 0
chr7:47276314|47276525 hsa-miR-4667-3p 1 0 0
chr7:47276314|47276525 hsa-miR-6824-5p 1 0 0
chr7:47276314|47276525 hsa-miR-3162-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6781-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6877-5p 1 0 0
chr7:47276314|47276525 hsa-miR-574-5p 1 0 0
chr7:47276314|47276525 hsa-miR-664b-5p 1 0 0
chr7:47276314|47276525 hsa-miR-1237-3p 1 0 0
chr7:47276314|47276525 hsa-miR-6886-3p 1 0 0
chr7:47276314|47276525 hsa-miR-1207-5p 1 0 0
chr7:47276314|47276525 hsa-miR-1233-5p 1 0 0
chr7:47276314|47276525 hsa-miR-4763-3p 1 0 0
chr7:47276314|47276525 hsa-miR-6778-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6787-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6816-5p 1 0 0
chr7:47276314|47276525 hsa-miR-3180 1 0 0
chr7:47276314|47276525 hsa-miR-6726-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6743-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6754-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6813-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6875-5p 1 0 0
chr7:47276314|47276525 hsa-miR-3127-3p 1 0 0
chr7:47276314|47276525 hsa-miR-4728-5p 1 0 0
chr7:47276314|47276525 hsa-miR-1237-5p 1 0 0
chr7:47276314|47276525 hsa-miR-328-5p 1 0 0
chr7:47276314|47276525 hsa-miR-4649-5p 1 0 0
chr7:47276314|47276525 hsa-miR-4701-3p 1 0 0
chr7:47276314|47276525 hsa-miR-6729-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6738-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6795-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6846-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6848-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6887-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6889-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6845-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6885-5p 1 0 0
chr7:47276314|47276525 hsa-miR-939-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6758-5p 1 0 0
chr7:47276314|47276525 hsa-miR-1914-3p 1 0 0
chr7:47276314|47276525 hsa-miR-6855-5p 1 0 0
chr7:47276314|47276525 hsa-miR-4472 1 0 0
chr7:47276314|47276525 hsa-miR-3184-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6762-5p 1 0 0
chr7:47276314|47276525 hsa-miR-6805-3p 1 0 0
chr7:47276314|47276525 hsa-miR-6884-5p 1 0 0
chr7:47276314|47276525 hsa-miR-128-2-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:47276314|47276525
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MFLSFPRPLTLKQSSQSTFPNPSSLTGACDTSVA
Nucleotide Sequence CTGTTTCTAAGTTTTCCTCGGCCCCTCACTTTAAAGCAGAGTTCACAAAGCACATTCCCAAACCCCAGCTCCCTGACAGGAGCTTGTGACACCAGTGTGGCCTAA
CircID chr7:47276314|47276525
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MLPTLPVSKFSSAPHFKAEFTKHIPKPQLPDRSL
Nucleotide Sequence CTGCTTCCAACTCTGCCTGTTTCTAAGTTTTCCTCGGCCCCTCACTTTAAAGCAGAGTTCACAAAGCACATTCCCAAACCCCAGCTCCCTGACAGGAGCTTGTGA
CircID chr7:47276314|47276525
ORF Type ORF3
Protein Length 52
Nucleotide Length 156
Protein Sequence MVSQAPVRELGFGNVLCELCFKVRGRGKLRNRQSWKQPNHSGCCVCVRVCMR
Nucleotide Sequence CTGGTGTCACAAGCTCCTGTCAGGGAGCTGGGGTTTGGGAATGTGCTTTGTGAACTCTGCTTTAAAGTGAGGGGCCGAGGAAAACTTAGAAACAGGCAGAGTTGGAAGCAGCCAAATCACAGTGGGTGTTGTGTGTGTGTGCGTGTGTGCATGCGT
CircID chr7:47276314|47276525
ORF Type ORF4
Protein Length 35
Nucleotide Length 108
Protein Sequence MLSKVKSPILRPHWCHKLLSGSWGLGMCFVNSALK
Nucleotide Sequence CTGCTTTCAAAAGTCAAATCCCCCATTCTTAGGCCACACTGGTGTCACAAGCTCCTGTCAGGGAGCTGGGGTTTGGGAATGTGCTTTGTGAACTCTGCTTTAAAGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab