CircNet

General Information

circRNA Basic Information

CircID	chr7:48506336\|48528345
Strand	+
CircType	exon
Host Gene	ENSG00000179869.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAATAACACTCTACAGCCACCCATATGGAGGGGCCTTGCTGAACGAGGACAAGATGGGTCATTCTACTCTCCAAGGCACAGTCAAATCTTCTAAGGATACAGATGTTGAAAAAGAGGAAAAGAGAGTGTTTGAAGGAAGGACCAATGGAGACATTCTTGTGTTATACAACCTTAGTAAACATTATCGACGCTTTTTCCAGAATATTATTGCTGTGCAAGATATTAGTTTGGGCATACCAAAAGGAGAGTGCTTTGGACTTCTAGGGGTGAATGGAGCTGGGAAGAGCACGACTTTCAAAATGCTGAATGGTGAAGTTTCTCTAACTTCAGGACATGCTATCATCAGGACTCCCATGGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr7:48506336\|48528345
ORF Type	ORF1
Protein Length	101
Nucleotide Length	303
Protein Sequence	MGHSTLQGTVKSSKDTDVEKEEKRVFEGRTNGDILVLYNLSKHYRRFFQNIIAVQDISLGIPKGECFGLLGVNGAGKSTTFKMLNGEVSLTSGHAIIRTPM
Nucleotide Sequence	ATGGGTCATTCTACTCTCCAAGGCACAGTCAAATCTTCTAAGGATACAGATGTTGAAAAAGAGGAAAAGAGAGTGTTTGAAGGAAGGACCAATGGAGACATTCTTGTGTTATACAACCTTAGTAAACATTATCGACGCTTTTTCCAGAATATTATTGCTGTGCAAGATATTAGTTTGGGCATACCAAAAGGAGAGTGCTTTGGACTTCTAGGGGTGAATGGAGCTGGGAAGAGCACGACTTTCAAAATGCTGAATGGTGAAGTTTCTCTAACTTCAGGACATGCTATCATCAGGACTCCCATG

CircID	chr7:48506336\|48528345
ORF Type	ORF2
Protein Length	58
Nucleotide Length	174
Protein Sequence	MGVLMIACPEVRETSPFSILKVVLFPAPFTPRSPKHSPFGMPKLISCTAIIFWKKRR*
Nucleotide Sequence	ATGGGAGTCCTGATGATAGCATGTCCTGAAGTTAGAGAAACTTCACCATTCAGCATTTTGAAAGTCGTGCTCTTCCCAGCTCCATTCACCCCTAGAAGTCCAAAGCACTCTCCTTTTGGTATGCCCAAACTAATATCTTGCACAGCAATAATATTCTGGAAAAAGCGTCGATAA

CircID	chr7:48506336\|48528345
ORF Type	ORF3
Protein Length	54
Nucleotide Length	162
Protein Sequence	MLKKRKRECLKEGPMETFLCYTTLVNIIDAFSRILLLCKILVWAYQKESALDF*
Nucleotide Sequence	ATGTTGAAAAAGAGGAAAAGAGAGTGTTTGAAGGAAGGACCAATGGAGACATTCTTGTGTTATACAACCTTAGTAAACATTATCGACGCTTTTTCCAGAATATTATTGCTGTGCAAGATATTAGTTTGGGCATACCAAAAGGAGAGTGCTTTGGACTTCTAG

CircID	chr7:48506336\|48528345
ORF Type	ORF4
Protein Length	32
Nucleotide Length	96
Protein Sequence	MSPLVLPSNTLFSSFSTSVSLEDLTVPWRVE*
Nucleotide Sequence	ATGTCTCCATTGGTCCTTCCTTCAAACACTCTCTTTTCCTCTTTTTCAACATCTGTATCCTTAGAAGATTTGACTGTGCCTTGGAGAGTAGAATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr7:48506336\|48528345	SAFB2	1	0	0
chr7:48506336\|48528345	TAF15	0	1	0
chr7:48506336\|48528345	AGO2	0	0	1

CircRNA Information