CircRNA Information

General Information
circRNA Basic Information
CircID chr7:51016660|51016892
Strand +
CircType exon
Host Gene ENSG00000106078.16;
Algorism CIRI2;
Sequence AGTCCTACGTGATCATGTGGCCAGGGCATGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCACATGGACAGCCATTCCCCAGGCTATGAAGTGACATAGGCCTCCCCCACGGTGCCTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAGAGGGTCAAGGAGCAGGGATGTTGGATGCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:51016660|51016892 hsa-miR-376b-5p 0 0 1
chr7:51016660|51016892 hsa-miR-376b-3p 0 0 1
chr7:51016660|51016892 hsa-miR-484 0 1 1
chr7:51016660|51016892 hsa-miR-504-5p 0 0 1
chr7:51016660|51016892 hsa-miR-504-3p 0 0 1
chr7:51016660|51016892 hsa-miR-588 0 0 1
chr7:51016660|51016892 hsa-miR-596 0 0 1
chr7:51016660|51016892 hsa-miR-625-5p 0 0 1
chr7:51016660|51016892 hsa-miR-625-3p 0 0 1
chr7:51016660|51016892 hsa-miR-661 0 0 1
chr7:51016660|51016892 hsa-miR-668-5p 0 0 1
chr7:51016660|51016892 hsa-miR-668-3p 0 0 1
chr7:51016660|51016892 hsa-miR-874-5p 0 0 1
chr7:51016660|51016892 hsa-miR-874-3p 0 0 1
chr7:51016660|51016892 hsa-miR-1205 0 1 1
chr7:51016660|51016892 hsa-miR-1286 0 0 1
chr7:51016660|51016892 hsa-miR-1275 0 0 1
chr7:51016660|51016892 hsa-miR-1825 0 0 1
chr7:51016660|51016892 hsa-miR-491-5p 0 0 1
chr7:51016660|51016892 hsa-miR-486-3p 0 0 1
chr7:51016660|51016892 hsa-miR-299-3p 0 0 1
chr7:51016660|51016892 hsa-miR-146b-3p 0 0 1
chr7:51016660|51016892 hsa-miR-199a-5p 0 0 1
chr7:51016660|51016892 hsa-miR-1184 0 0 1
chr7:51016660|51016892 hsa-miR-525-5p 0 0 1
chr7:51016660|51016892 hsa-miR-508-5p 0 1 1
chr7:51016660|51016892 hsa-miR-876-3p 0 0 1
chr7:51016660|51016892 hsa-miR-199b-5p 0 0 1
chr7:51016660|51016892 hsa-miR-520a-5p 0 0 1
chr7:51016660|51016892 hsa-miR-323-5p 0 0 1
chr7:51016660|51016892 hsa-miR-376a 0 0 1
chr7:51016660|51016892 hsa-miR-637 1 0 0
chr7:51016660|51016892 hsa-miR-3155a 0 1 0
chr7:51016660|51016892 hsa-miR-4258 0 1 0
chr7:51016660|51016892 hsa-miR-4253 0 1 0
chr7:51016660|51016892 hsa-miR-4268 1 0 0
chr7:51016660|51016892 hsa-miR-4448 0 1 0
chr7:51016660|51016892 hsa-miR-4721 0 1 0
chr7:51016660|51016892 hsa-miR-4741 1 0 0
chr7:51016660|51016892 hsa-miR-8089 1 1 0
chr7:51016660|51016892 hsa-miR-6879-3p 1 1 0
chr7:51016660|51016892 hsa-miR-6825-5p 0 1 0
chr7:51016660|51016892 hsa-miR-4687-3p 1 0 0
chr7:51016660|51016892 hsa-miR-6089 1 0 0
chr7:51016660|51016892 hsa-miR-1915-5p 1 0 0
chr7:51016660|51016892 hsa-miR-3151-5p 0 1 0
chr7:51016660|51016892 hsa-miR-6768-5p 0 1 0
chr7:51016660|51016892 hsa-miR-6728-3p 1 0 0
chr7:51016660|51016892 hsa-miR-6772-3p 1 1 0
chr7:51016660|51016892 hsa-miR-7113-3p 1 1 0
chr7:51016660|51016892 hsa-miR-889-5p 0 1 0
chr7:51016660|51016892 hsa-miR-5196-3p 1 0 0
chr7:51016660|51016892 hsa-miR-103b 0 1 0
chr7:51016660|51016892 hsa-miR-7106-3p 1 0 0
chr7:51016660|51016892 hsa-miR-3180-5p 0 1 0
chr7:51016660|51016892 hsa-miR-2276-5p 0 1 0
chr7:51016660|51016892 hsa-miR-6729-3p 1 0 0
chr7:51016660|51016892 hsa-miR-6790-3p 0 1 0
chr7:51016660|51016892 hsa-miR-6890-3p 0 1 0
chr7:51016660|51016892 hsa-miR-6808-3p 0 1 0
chr7:51016660|51016892 hsa-miR-1343-5p 1 0 0
chr7:51016660|51016892 hsa-miR-6763-5p 1 1 0
chr7:51016660|51016892 hsa-miR-5189-5p 1 0 0
chr7:51016660|51016892 hsa-miR-4723-5p 0 1 0
chr7:51016660|51016892 hsa-miR-4665-5p 0 1 0
chr7:51016660|51016892 hsa-miR-6810-3p 1 1 0
chr7:51016660|51016892 hsa-miR-10394-5p 0 1 0
chr7:51016660|51016892 hsa-miR-10397-5p 1 1 0
chr7:51016660|51016892 hsa-miR-6820-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr7:51016660|51016892
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MPESCKGGGWLRSHHHWSGWAVPHMDSHSPGYEVT
Nucleotide Sequence ATGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCACATGGACAGCCATTCCCCAGGCTATGAAGTGACATAG

CircID chr7:51016660|51016892
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MCTEPDDFTGSLLESCRGSRSRDVGCP
Nucleotide Sequence CTGTGTACGGAGCCTGATGACTTCACTGGGAGCCTTCTGGAATCCTGCAGAGGGTCAAGGAGCAGGGATGTTGGATGCCCA

CircID chr7:51016660|51016892
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MWPGHARVLQGWRVAEVTPPLEWMGSAPHGQPFPRL
Nucleotide Sequence ATGTGGCCAGGGCATGCCCGAGTCCTGCAAGGGTGGCGGGTGGCTGAGGTCACACCACCACTGGAGTGGATGGGCAGTGCCCCACATGGACAGCCATTCCCCAGGCTATGA

CircID chr7:51016660|51016892
ORF Type ORF4
Protein Length 35
Nucleotide Length 105
Protein Sequence MSMWGTAHPLQWWCDLSHPPPLQDSGMPWPHDHVG
Nucleotide Sequence CTGTCCATGTGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCATGCCCTGGCCACATGATCACGTAGGA

CircID chr7:51016660|51016892
ORF Type ORF5
Protein Length 42
Nucleotide Length 129
Protein Sequence MSLHSLGNGCPCGALPIHSSGGVTSATRHPCRTRACPGHMIT
Nucleotide Sequence ATGTCACTTCATAGCCTGGGGAATGGCTGTCCATGTGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGACCTCAGCCACCCGCCACCCTTGCAGGACTCGGGCATGCCCTGGCCACATGATCACGTAG

CircID chr7:51016660|51016892
ORF Type ORF6
Protein Length 50
Nucleotide Length 153
Protein Sequence MLLDPLQDSRRLPVKSSGSVHRHRGGGLCHFIAWGMAVHVGHCPSTPVVV
Nucleotide Sequence CTGCTCCTTGACCCTCTGCAGGATTCCAGAAGGCTCCCAGTGAAGTCATCAGGCTCCGTACACAGGCACCGTGGGGGAGGCCTATGTCACTTCATAGCCTGGGGAATGGCTGTCCATGTGGGGCACTGCCCATCCACTCCAGTGGTGGTGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites