CircRNA Information

General Information
circRNA Basic Information
CircID chr7:5303636|5303757
Strand +
CircType exon
Host Gene ENSG00000164638.9;
Algorism CIRI2;
Sequence CTAGGTCAAGCTGACTTCAGCCAGGGTGTGGGGGCCCGGCTTCGTAGCCCCCAGACTTACCTCCCCTCTTCTATCCCGGGCCAGGAAGGCAATGGGAGGGCTCCCTAGTCAGGCACAGCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:5303636|5303757 hsa-miR-192-5p 0 0 1
chr7:5303636|5303757 hsa-miR-192-3p 0 0 1
chr7:5303636|5303757 hsa-miR-215-5p 0 0 1
chr7:5303636|5303757 hsa-miR-215-3p 0 0 1
chr7:5303636|5303757 hsa-miR-637 1 1 1
chr7:5303636|5303757 hsa-miR-1264 0 0 1
chr7:5303636|5303757 hsa-miR-1321 0 0 1
chr7:5303636|5303757 hsa-miR-296-5p 0 1 1
chr7:5303636|5303757 hsa-miR-1233 0 0 1
chr7:5303636|5303757 hsa-miR-550 0 0 1
chr7:5303636|5303757 hsa-miR-1201 0 0 1
chr7:5303636|5303757 hsa-miR-762 1 0 0
chr7:5303636|5303757 hsa-miR-940 1 0 0
chr7:5303636|5303757 hsa-miR-1538 1 0 0
chr7:5303636|5303757 hsa-miR-3176 1 0 0
chr7:5303636|5303757 hsa-miR-4297 0 1 0
chr7:5303636|5303757 hsa-miR-4298 1 0 0
chr7:5303636|5303757 hsa-miR-4281 1 0 0
chr7:5303636|5303757 hsa-miR-4290 0 1 0
chr7:5303636|5303757 hsa-miR-4489 0 1 0
chr7:5303636|5303757 hsa-miR-4675 0 1 0
chr7:5303636|5303757 hsa-miR-4706 1 0 0
chr7:5303636|5303757 hsa-miR-4739 1 0 0
chr7:5303636|5303757 hsa-miR-4741 0 1 0
chr7:5303636|5303757 hsa-miR-5787 1 0 0
chr7:5303636|5303757 hsa-miR-7974 1 1 0
chr7:5303636|5303757 hsa-miR-4433b-3p 1 0 0
chr7:5303636|5303757 hsa-miR-1247-3p 0 1 0
chr7:5303636|5303757 hsa-miR-212-5p 0 1 0
chr7:5303636|5303757 hsa-miR-6861-5p 1 0 0
chr7:5303636|5303757 hsa-miR-6825-5p 0 1 0
chr7:5303636|5303757 hsa-miR-6799-5p 0 1 0
chr7:5303636|5303757 hsa-miR-197-5p 1 1 0
chr7:5303636|5303757 hsa-miR-1915-5p 1 1 0
chr7:5303636|5303757 hsa-miR-185-3p 0 1 0
chr7:5303636|5303757 hsa-miR-532-3p 0 1 0
chr7:5303636|5303757 hsa-miR-3667-3p 0 1 0
chr7:5303636|5303757 hsa-miR-6749-5p 1 0 0
chr7:5303636|5303757 hsa-miR-149-3p 1 0 0
chr7:5303636|5303757 hsa-miR-6824-5p 1 0 0
chr7:5303636|5303757 hsa-miR-550b-2-5p 0 1 0
chr7:5303636|5303757 hsa-miR-7152-3p 0 1 0
chr7:5303636|5303757 hsa-miR-4776-3p 1 0 0
chr7:5303636|5303757 hsa-miR-6870-5p 1 0 0
chr7:5303636|5303757 hsa-miR-1343-5p 1 0 0
chr7:5303636|5303757 hsa-miR-6803-5p 1 1 0
chr7:5303636|5303757 hsa-miR-6851-5p 0 1 0
chr7:5303636|5303757 hsa-miR-7107-5p 1 0 0
chr7:5303636|5303757 hsa-miR-3620-5p 1 1 0
chr7:5303636|5303757 hsa-miR-6848-5p 1 1 0
chr7:5303636|5303757 hsa-miR-6858-5p 1 0 0
chr7:5303636|5303757 hsa-miR-939-5p 1 1 0
chr7:5303636|5303757 hsa-miR-1271-3p 0 1 0
chr7:5303636|5303757 hsa-miR-6724-5p 1 0 0
chr7:5303636|5303757 hsa-miR-550a-3-5p 0 1 0
chr7:5303636|5303757 hsa-miR-550a-5p 0 1 0
chr7:5303636|5303757 hsa-miR-5581-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr7:5303636|5303757
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MTSARVWGPGFVAPRLTSPLLSRARKAMGGLPSQAQP
Nucleotide Sequence CTGACTTCAGCCAGGGTGTGGGGGCCCGGCTTCGTAGCCCCCAGACTTACCTCCCCTCTTCTATCCCGGGCCAGGAAGGCAATGGGAGGGCTCCCTAGTCAGGCACAGCCC

CircID chr7:5303636|5303757
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MARDRRGEVSLGATKPGPHTLAEVSLT
Nucleotide Sequence CTGGCCCGGGATAGAAGAGGGGAGGTAAGTCTGGGGGCTACGAAGCCGGGCCCCCACACCCTGGCTGAAGTCAGCTTGACCTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites