CircRNA Information

General Information
circRNA Basic Information
CircID chr7:5528622|5528825
Strand +
CircType exon
Host Gene ENSG00000075624.12;
Algorism CIRI2;
Sequence CCCAGCACACTTAGCCGTGTTCTTTGCACTTTCTGCATGTCCCCCGTCTGGCCTGGCTGTCCCCAGTGGCTTCCCCAGTGTGACATGGTGTATCTCTGCCTTACAGATCATGTTTGAGACCTTCAACACCCCAGCCATGTACGTTGCTATCCAGGCTGTGCTATCCCTGTACGCCTCTGGCCGTACCACTGGCATCGTGATGGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:5528622|5528825 hsa-miR-17-5p 0 0 1
chr7:5528622|5528825 hsa-miR-17-3p 0 0 1
chr7:5528622|5528825 hsa-miR-19a-5p 0 0 1
chr7:5528622|5528825 hsa-miR-19a-3p 0 0 1
chr7:5528622|5528825 hsa-miR-20a-5p 0 0 1
chr7:5528622|5528825 hsa-miR-20a-3p 0 0 1
chr7:5528622|5528825 hsa-miR-93-5p 0 0 1
chr7:5528622|5528825 hsa-miR-93-3p 0 0 1
chr7:5528622|5528825 hsa-miR-106a-5p 0 0 1
chr7:5528622|5528825 hsa-miR-106a-3p 0 0 1
chr7:5528622|5528825 hsa-miR-130a-5p 0 0 1
chr7:5528622|5528825 hsa-miR-130a-3p 0 0 1
chr7:5528622|5528825 hsa-miR-106b-5p 0 0 1
chr7:5528622|5528825 hsa-miR-106b-3p 0 0 1
chr7:5528622|5528825 hsa-miR-301a-5p 0 0 1
chr7:5528622|5528825 hsa-miR-301a-3p 0 0 1
chr7:5528622|5528825 hsa-miR-130b-5p 0 0 1
chr7:5528622|5528825 hsa-miR-130b-3p 0 0 1
chr7:5528622|5528825 hsa-miR-20b-5p 0 0 1
chr7:5528622|5528825 hsa-miR-20b-3p 0 0 1
chr7:5528622|5528825 hsa-miR-493-5p 0 0 1
chr7:5528622|5528825 hsa-miR-493-3p 0 0 1
chr7:5528622|5528825 hsa-miR-519d-5p 0 0 1
chr7:5528622|5528825 hsa-miR-519d-3p 0 0 1
chr7:5528622|5528825 hsa-miR-527 0 0 1
chr7:5528622|5528825 hsa-miR-506-5p 0 0 1
chr7:5528622|5528825 hsa-miR-506-3p 0 0 1
chr7:5528622|5528825 hsa-miR-595 0 0 1
chr7:5528622|5528825 hsa-miR-608 0 0 1
chr7:5528622|5528825 hsa-miR-609 0 0 1
chr7:5528622|5528825 hsa-miR-648 0 0 1
chr7:5528622|5528825 hsa-miR-653-5p 0 0 1
chr7:5528622|5528825 hsa-miR-653-3p 0 0 1
chr7:5528622|5528825 hsa-miR-454-5p 0 0 1
chr7:5528622|5528825 hsa-miR-454-3p 0 0 1
chr7:5528622|5528825 hsa-miR-298 0 0 1
chr7:5528622|5528825 hsa-miR-301b-5p 0 0 1
chr7:5528622|5528825 hsa-miR-301b-3p 0 0 1
chr7:5528622|5528825 hsa-miR-671-5p 1 1 1
chr7:5528622|5528825 hsa-miR-483-5p 1 1 1
chr7:5528622|5528825 hsa-miR-342-5p 0 0 1
chr7:5528622|5528825 hsa-miR-519b-3p 0 0 1
chr7:5528622|5528825 hsa-miR-519c-3p 0 0 1
chr7:5528622|5528825 hsa-miR-518a-5p 0 0 1
chr7:5528622|5528825 hsa-miR-371-5p 0 0 1
chr7:5528622|5528825 hsa-miR-124 0 0 1
chr7:5528622|5528825 hsa-miR-19b 0 0 1
chr7:5528622|5528825 hsa-miR-1254 0 0 1
chr7:5528622|5528825 hsa-miR-519a 0 0 1
chr7:5528622|5528825 hsa-miR-637 1 0 0
chr7:5528622|5528825 hsa-miR-638 1 0 0
chr7:5528622|5528825 hsa-miR-663a 1 0 0
chr7:5528622|5528825 hsa-miR-762 1 0 0
chr7:5528622|5528825 hsa-miR-2110 0 1 0
chr7:5528622|5528825 hsa-miR-3138 1 0 0
chr7:5528622|5528825 hsa-miR-4252 0 1 0
chr7:5528622|5528825 hsa-miR-3714 0 1 0
chr7:5528622|5528825 hsa-miR-4514 1 0 0
chr7:5528622|5528825 hsa-miR-4525 1 0 0
chr7:5528622|5528825 hsa-miR-4651 1 0 0
chr7:5528622|5528825 hsa-miR-4688 1 0 0
chr7:5528622|5528825 hsa-miR-5090 1 0 0
chr7:5528622|5528825 hsa-miR-5698 1 0 0
chr7:5528622|5528825 hsa-miR-5787 1 1 0
chr7:5528622|5528825 hsa-miR-7704 1 0 0
chr7:5528622|5528825 hsa-miR-8089 1 1 0
chr7:5528622|5528825 hsa-miR-12128 0 1 0
chr7:5528622|5528825 hsa-miR-7155-5p 0 1 0
chr7:5528622|5528825 hsa-miR-3157-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6747-5p 1 1 0
chr7:5528622|5528825 hsa-miR-6825-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6857-5p 1 1 0
chr7:5528622|5528825 hsa-miR-1972 1 1 0
chr7:5528622|5528825 hsa-miR-4687-3p 1 0 0
chr7:5528622|5528825 hsa-miR-6799-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6089 1 0 0
chr7:5528622|5528825 hsa-miR-6757-5p 0 1 0
chr7:5528622|5528825 hsa-miR-4755-3p 1 1 0
chr7:5528622|5528825 hsa-miR-6727-5p 1 0 0
chr7:5528622|5528825 hsa-miR-4655-5p 1 0 0
chr7:5528622|5528825 hsa-miR-8069 1 0 0
chr7:5528622|5528825 hsa-miR-7845-5p 1 0 0
chr7:5528622|5528825 hsa-miR-486-3p 1 0 0
chr7:5528622|5528825 hsa-miR-3194-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6810-5p 1 1 0
chr7:5528622|5528825 hsa-miR-1226-5p 1 0 0
chr7:5528622|5528825 hsa-miR-1229-5p 1 0 0
chr7:5528622|5528825 hsa-miR-542-5p 0 1 0
chr7:5528622|5528825 hsa-miR-193b-5p 1 0 0
chr7:5528622|5528825 hsa-miR-4640-5p 1 0 0
chr7:5528622|5528825 hsa-miR-296-3p 1 0 0
chr7:5528622|5528825 hsa-miR-6771-5p 1 0 0
chr7:5528622|5528825 hsa-miR-92b-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6749-5p 1 0 0
chr7:5528622|5528825 hsa-miR-4743-5p 1 1 0
chr7:5528622|5528825 hsa-miR-4787-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6824-5p 1 0 0
chr7:5528622|5528825 hsa-miR-5010-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6895-5p 1 0 0
chr7:5528622|5528825 hsa-miR-3191-3p 1 1 0
chr7:5528622|5528825 hsa-miR-6801-5p 1 1 0
chr7:5528622|5528825 hsa-miR-10400-5p 1 0 0
chr7:5528622|5528825 hsa-miR-1207-5p 1 0 0
chr7:5528622|5528825 hsa-miR-4763-3p 1 0 0
chr7:5528622|5528825 hsa-miR-6787-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6812-5p 0 1 0
chr7:5528622|5528825 hsa-miR-6870-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6775-5p 1 0 0
chr7:5528622|5528825 hsa-miR-1343-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6743-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6756-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6803-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6819-5p 0 1 0
chr7:5528622|5528825 hsa-miR-6763-5p 1 0 0
chr7:5528622|5528825 hsa-miR-7111-5p 1 0 0
chr7:5528622|5528825 hsa-miR-5189-5p 1 0 0
chr7:5528622|5528825 hsa-miR-5196-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6780b-5p 1 1 0
chr7:5528622|5528825 hsa-miR-10396b-5p 1 0 0
chr7:5528622|5528825 hsa-miR-328-5p 1 0 0
chr7:5528622|5528825 hsa-miR-4632-5p 1 0 0
chr7:5528622|5528825 hsa-miR-4725-3p 1 0 0
chr7:5528622|5528825 hsa-miR-4726-5p 1 0 0
chr7:5528622|5528825 hsa-miR-4745-3p 1 0 0
chr7:5528622|5528825 hsa-miR-6735-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6794-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6795-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6848-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6887-5p 1 0 0
chr7:5528622|5528825 hsa-miR-4723-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6845-5p 1 0 0
chr7:5528622|5528825 hsa-miR-6885-5p 1 1 0
chr7:5528622|5528825 hsa-miR-939-5p 1 0 0
chr7:5528622|5528825 hsa-miR-3085-5p 0 1 0
chr7:5528622|5528825 hsa-miR-4665-5p 1 0 0
chr7:5528622|5528825 hsa-miR-4700-5p 0 1 0
chr7:5528622|5528825 hsa-miR-4667-5p 0 1 0
chr7:5528622|5528825 hsa-miR-6791-5p 1 0 0
chr7:5528622|5528825 hsa-miR-122b-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:5528622|5528825
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MSPVWPGCPQWLPQCDMVYLCLTDHV
Nucleotide Sequence ATGTCCCCCGTCTGGCCTGGCTGTCCCCAGTGGCTTCCCCAGTGTGACATGGTGTATCTCTGCCTTACAGATCATGTTTGA
CircID chr7:5528622|5528825
ORF Type ORF2
Protein Length 50
Nucleotide Length 150
Protein Sequence MAVPSGFPSVTWCISALQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVM
Nucleotide Sequence CTGGCTGTCCCCAGTGGCTTCCCCAGTGTGACATGGTGTATCTCTGCCTTACAGATCATGTTTGAGACCTTCAACACCCCAGCCATGTACGTTGCTATCCAGGCTGTGCTATCCCTGTACGCCTCTGGCCGTACCACTGGCATCGTGATG
CircID chr7:5528622|5528825
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MPYRSCLRPSTPQPCTLLSRLCYPCTPLAVPLAS
Nucleotide Sequence CTGCCTTACAGATCATGTTTGAGACCTTCAACACCCCAGCCATGTACGTTGCTATCCAGGCTGTGCTATCCCTGTACGCCTCTGGCCGTACCACTGGCATCGTGA
CircID chr7:5528622|5528825
ORF Type ORF4
Protein Length 65
Nucleotide Length 195
Protein Sequence MPVVRPEAYRDSTAWIATYMAGVLKVSNMICKAEIHHVTLGKPLGTARPDGGHAESAKNTAKCAG
Nucleotide Sequence ATGCCAGTGGTACGGCCAGAGGCGTACAGGGATAGCACAGCCTGGATAGCAACGTACATGGCTGGGGTGTTGAAGGTCTCAAACATGATCTGTAAGGCAGAGATACACCATGTCACACTGGGGAAGCCACTGGGGACAGCCAGGCCAGACGGGGGACATGCAGAAAGTGCAAAGAACACGGCTAAGTGTGCTGGG
CircID chr7:5528622|5528825
ORF Type ORF5
Protein Length 28
Nucleotide Length 84
Protein Sequence MSHWGSHWGQPGQTGDMQKVQRTRLSVL
Nucleotide Sequence ATGTCACACTGGGGAAGCCACTGGGGACAGCCAGGCCAGACGGGGGACATGCAGAAAGTGCAAAGAACACGGCTAAGTGTGCTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab