CircNet

General Information

circRNA Basic Information

CircID	chr7:5603496\|5604030
Strand	+
CircType	Non-Repeat
Host Gene	ENSG00000075618.17;
Algorism	find_circ;CIRI2;CIRC
Sequence	GAATGCCAGCTGCTACTTTGACATCGAGTGGCGTGACCGGCGCATCACACTGAGGGCGTCCAATGGCAAGTTTGTGACCTCCAAGAAGAATGGGCAGCTGGCCGCCTCGGTGGAGACAGCAGGGGACTCAGAGCTCTTCCTCATGAAGCTCATCAACCGCCCCATCATCGTGTTCCGCGGGGAGCATGGCTTCATCGGCTGCCGCAAGGTCACGGGCACCCTGGACGCCAACCGCTCCAGCTATGACGTCTTCCAGCTGGAGTTCAACGATGGCGCCTACAACATCAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr7:5603496\|5604030
ORF Type	ORF1
Protein Length	61
Nucleotide Length	183
Protein Sequence	MKPCSPRNTMMGRLMSFMRKSSESPAVSTEAASCPFFLEVTNLPLDALSVMRRSRHSMSK*
Nucleotide Sequence	ATGAAGCCATGCTCCCCGCGGAACACGATGATGGGGCGGTTGATGAGCTTCATGAGGAAGAGCTCTGAGTCCCCTGCTGTCTCCACCGAGGCGGCCAGCTGCCCATTCTTCTTGGAGGTCACAAACTTGCCATTGGACGCCCTCAGTGTGATGCGCCGGTCACGCCACTCGATGTCAAAGTAG

CircID	chr7:5603496\|5604030
ORF Type	ORF2
Protein Length	49
Nucleotide Length	147
Protein Sequence	MKLINRPIIVFRGEHGFIGCRKVTGTLDANRSSYDVFQLEFNDGAYNIK
Nucleotide Sequence	ATGAAGCTCATCAACCGCCCCATCATCGTGTTCCGCGGGGAGCATGGCTTCATCGGCTGCCGCAAGGTCACGGGCACCCTGGACGCCAACCGCTCCAGCTATGACGTCTTCCAGCTGGAGTTCAACGATGGCGCCTACAACATCAAA

CircID	chr7:5603496\|5604030
ORF Type	ORF3
Protein Length	35
Nucleotide Length	105
Protein Sequence	MASSAAARSRAPWTPTAPAMTSSSWSSTMAPTTSK
Nucleotide Sequence	ATGGCTTCATCGGCTGCCGCAAGGTCACGGGCACCCTGGACGCCAACCGCTCCAGCTATGACGTCTTCCAGCTGGAGTTCAACGATGGCGCCTACAACATCAAAG

CircID	chr7:5603496\|5604030
ORF Type	ORF4
Protein Length	70
Nucleotide Length	210
Protein Sequence	PAHHTEGVQWQVCDLQEEWAAGRLGGDSRGLRALPHEAHQPPHHRVPRGAWLHRLPQGHGHPGRQPLQL*
Nucleotide Sequence	CCGGCGCATCACACTGAGGGCGTCCAATGGCAAGTTTGTGACCTCCAAGAAGAATGGGCAGCTGGCCGCCTCGGTGGAGACAGCAGGGGACTCAGAGCTCTTCCTCATGAAGCTCATCAACCGCCCCATCATCGTGTTCCGCGGGGAGCATGGCTTCATCGGCTGCCGCAAGGTCACGGGCACCCTGGACGCCAACCGCTCCAGCTATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr7:5603496\|5604030	NOP56	0	1	0
chr7:5603496\|5604030	FUS	2	3	1
chr7:5603496\|5604030	SF3B4	0	1	0
chr7:5603496\|5604030	PRPF8	2	7	0
chr7:5603496\|5604030	UPF1	4	4	0
chr7:5603496\|5604030	FMR1	8	0	4
chr7:5603496\|5604030	CPSF6	0	1	0
chr7:5603496\|5604030	NUDT21	1	1	0
chr7:5603496\|5604030	CNBP	2	0	0
chr7:5603496\|5604030	CPSF1	0	1	0
chr7:5603496\|5604030	ELAVL1	2	0	1
chr7:5603496\|5604030	GNL3	2	0	0
chr7:5603496\|5604030	DGCR8	1	0	0
chr7:5603496\|5604030	SRSF7	1	0	0
chr7:5603496\|5604030	SRSF1	8	0	2
chr7:5603496\|5604030	NOP58	1	0	4
chr7:5603496\|5604030	SRSF3	1	0	0
chr7:5603496\|5604030	U2AF1	2	0	1
chr7:5603496\|5604030	ADAR	1	0	0
chr7:5603496\|5604030	U2AF2	5	6	0
chr7:5603496\|5604030	PCBP2	0	1	0
chr7:5603496\|5604030	HNRNPA2B1	4	0	1
chr7:5603496\|5604030	SF3A3	1	0	0
chr7:5603496\|5604030	FIP1L1	0	1	0
chr7:5603496\|5604030	PTBP1	0	0	2
chr7:5603496\|5604030	HNRNPC	15	17	0
chr7:5603496\|5604030	TRA2A	0	0	4
chr7:5603496\|5604030	SMNDC1	1	0	0
chr7:5603496\|5604030	MSI2	3	0	3
chr7:5603496\|5604030	MSI1	0	1	0
chr7:5603496\|5604030	HNRNPA1	2	2	0
chr7:5603496\|5604030	LIN28B	0	0	2
chr7:5603496\|5604030	LIN28A	1	0	1
chr7:5603496\|5604030	FTO	0	1	0
chr7:5603496\|5604030	FXR1	3	0	1
chr7:5603496\|5604030	FXR2	3	0	1
chr7:5603496\|5604030	SND1	0	0	4
chr7:5603496\|5604030	IGF2BP1	1	0	4
chr7:5603496\|5604030	GTF2F1	0	1	0
chr7:5603496\|5604030	IGF2BP3	2	0	5
chr7:5603496\|5604030	IGF2BP2	7	3	9
chr7:5603496\|5604030	AUH	2	0	0
chr7:5603496\|5604030	TARDBP	2	0	2
chr7:5603496\|5604030	YTHDC1	0	0	4
chr7:5603496\|5604030	BUD13	2	0	0
chr7:5603496\|5604030	YTHDF2	1	0	0
chr7:5603496\|5604030	RTCB	1	0	0
chr7:5603496\|5604030	BCCIP	0	0	1
chr7:5603496\|5604030	CSTF2	0	1	0
chr7:5603496\|5604030	RNF219	1	0	0
chr7:5603496\|5604030	WDR33	0	2	0
chr7:5603496\|5604030	EIF4G2	1	0	0
chr7:5603496\|5604030	AGO2	2	0	2
chr7:5603496\|5604030	AGO1	1	0	0
chr7:5603496\|5604030	EIF4A3	6	7	4
chr7:5603496\|5604030	FBL	2	2	3

CircRNA Information