CircRNA Information

General Information
circRNA Basic Information
CircID chr7:6023996|6024141
Strand +
CircType exon
Host Gene ENSG00000086232.11;
Algorism CIRI2;
Sequence CTTTTTATCTGTTCTCTCCACCTTCAGTTTAGCGTCATTCCAAAACCACACCCTTGCAAAGCTTTGTACTCCGCACCCCAGATGATCTCCAGGCAGCTCAGATCTCTTTCCTGCCTTTGCCCTGCACTGTTCCCCGGTACTTCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:6023996|6024141 hsa-miR-22-5p 0 0 1
chr7:6023996|6024141 hsa-miR-22-3p 0 0 1
chr7:6023996|6024141 hsa-miR-148a-5p 0 0 1
chr7:6023996|6024141 hsa-miR-148a-3p 0 0 1
chr7:6023996|6024141 hsa-miR-152-5p 0 0 1
chr7:6023996|6024141 hsa-miR-152-3p 0 0 1
chr7:6023996|6024141 hsa-miR-185-5p 0 0 1
chr7:6023996|6024141 hsa-miR-185-3p 0 0 1
chr7:6023996|6024141 hsa-miR-206 0 0 1
chr7:6023996|6024141 hsa-miR-148b-5p 0 0 1
chr7:6023996|6024141 hsa-miR-148b-3p 0 0 1
chr7:6023996|6024141 hsa-miR-493-5p 0 0 1
chr7:6023996|6024141 hsa-miR-493-3p 0 0 1
chr7:6023996|6024141 hsa-miR-558 0 0 1
chr7:6023996|6024141 hsa-miR-577 0 0 1
chr7:6023996|6024141 hsa-miR-608 1 0 1
chr7:6023996|6024141 hsa-miR-613 0 0 1
chr7:6023996|6024141 hsa-miR-620 0 0 1
chr7:6023996|6024141 hsa-miR-637 1 0 1
chr7:6023996|6024141 hsa-miR-661 1 1 1
chr7:6023996|6024141 hsa-miR-658 0 0 1
chr7:6023996|6024141 hsa-miR-675-5p 0 0 1
chr7:6023996|6024141 hsa-miR-675-3p 0 0 1
chr7:6023996|6024141 hsa-miR-940 0 0 1
chr7:6023996|6024141 hsa-miR-548g-5p 0 0 1
chr7:6023996|6024141 hsa-miR-548g-3p 0 0 1
chr7:6023996|6024141 hsa-miR-1270 0 0 1
chr7:6023996|6024141 hsa-miR-524-5p 0 0 1
chr7:6023996|6024141 hsa-miR-342-5p 0 0 1
chr7:6023996|6024141 hsa-miR-450b-5p 0 0 1
chr7:6023996|6024141 hsa-miR-520d-5p 0 0 1
chr7:6023996|6024141 hsa-miR-1 0 0 1
chr7:6023996|6024141 hsa-miR-1254 0 0 1
chr7:6023996|6024141 hsa-miR-557 1 0 0
chr7:6023996|6024141 hsa-miR-663a 1 0 0
chr7:6023996|6024141 hsa-miR-298 1 0 0
chr7:6023996|6024141 hsa-miR-1183 1 0 0
chr7:6023996|6024141 hsa-miR-1268a 1 0 0
chr7:6023996|6024141 hsa-miR-2278 1 0 0
chr7:6023996|6024141 hsa-miR-3138 1 0 0
chr7:6023996|6024141 hsa-miR-4298 1 0 0
chr7:6023996|6024141 hsa-miR-4303 0 1 0
chr7:6023996|6024141 hsa-miR-4311 0 1 0
chr7:6023996|6024141 hsa-miR-4281 1 0 0
chr7:6023996|6024141 hsa-miR-3911 1 0 0
chr7:6023996|6024141 hsa-miR-3936 1 0 0
chr7:6023996|6024141 hsa-miR-1268b 1 0 0
chr7:6023996|6024141 hsa-miR-4449 1 0 0
chr7:6023996|6024141 hsa-miR-4466 1 0 0
chr7:6023996|6024141 hsa-miR-4476 1 0 0
chr7:6023996|6024141 hsa-miR-4513 1 0 0
chr7:6023996|6024141 hsa-miR-3978 1 0 0
chr7:6023996|6024141 hsa-miR-4644 0 1 0
chr7:6023996|6024141 hsa-miR-4651 1 0 0
chr7:6023996|6024141 hsa-miR-4656 1 0 0
chr7:6023996|6024141 hsa-miR-4682 1 1 0
chr7:6023996|6024141 hsa-miR-4736 1 0 0
chr7:6023996|6024141 hsa-miR-4739 1 0 0
chr7:6023996|6024141 hsa-miR-5572 1 0 0
chr7:6023996|6024141 hsa-miR-5787 1 0 0
chr7:6023996|6024141 hsa-miR-6081 1 1 0
chr7:6023996|6024141 hsa-miR-6086 1 0 0
chr7:6023996|6024141 hsa-miR-6127 1 0 0
chr7:6023996|6024141 hsa-miR-8052 1 0 0
chr7:6023996|6024141 hsa-miR-8089 1 0 0
chr7:6023996|6024141 hsa-miR-504-3p 1 0 0
chr7:6023996|6024141 hsa-miR-6747-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6804-5p 1 0 0
chr7:6023996|6024141 hsa-miR-5187-5p 1 0 0
chr7:6023996|6024141 hsa-miR-7114-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6880-5p 1 1 0
chr7:6023996|6024141 hsa-miR-4695-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6727-5p 1 0 0
chr7:6023996|6024141 hsa-miR-4655-5p 1 1 0
chr7:6023996|6024141 hsa-miR-197-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6742-5p 1 0 0
chr7:6023996|6024141 hsa-miR-1292-5p 1 1 0
chr7:6023996|6024141 hsa-miR-6748-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6772-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6796-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6798-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6760-5p 1 0 0
chr7:6023996|6024141 hsa-miR-2467-3p 1 0 0
chr7:6023996|6024141 hsa-miR-6782-5p 1 0 0
chr7:6023996|6024141 hsa-miR-5006-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6850-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6852-5p 0 1 0
chr7:6023996|6024141 hsa-miR-6740-5p 1 0 0
chr7:6023996|6024141 hsa-miR-4732-5p 1 0 0
chr7:6023996|6024141 hsa-miR-744-5p 1 0 0
chr7:6023996|6024141 hsa-miR-1207-5p 1 0 0
chr7:6023996|6024141 hsa-miR-4763-3p 1 0 0
chr7:6023996|6024141 hsa-miR-6812-5p 1 1 0
chr7:6023996|6024141 hsa-miR-6865-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6775-5p 1 1 0
chr7:6023996|6024141 hsa-miR-1343-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6756-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6803-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6819-5p 1 1 0
chr7:6023996|6024141 hsa-miR-6851-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6722-3p 1 0 0
chr7:6023996|6024141 hsa-miR-6779-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6808-5p 0 1 0
chr7:6023996|6024141 hsa-miR-6879-5p 1 1 0
chr7:6023996|6024141 hsa-miR-6780b-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6836-5p 1 0 0
chr7:6023996|6024141 hsa-miR-1237-5p 1 0 0
chr7:6023996|6024141 hsa-miR-4749-5p 0 1 0
chr7:6023996|6024141 hsa-miR-6735-5p 1 1 0
chr7:6023996|6024141 hsa-miR-6738-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6777-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6795-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6883-5p 1 0 0
chr7:6023996|6024141 hsa-miR-939-5p 1 0 0
chr7:6023996|6024141 hsa-miR-4664-5p 0 1 0
chr7:6023996|6024141 hsa-miR-7843-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6855-5p 1 1 0
chr7:6023996|6024141 hsa-miR-6750-5p 1 0 0
chr7:6023996|6024141 hsa-miR-4667-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6791-5p 1 0 0
chr7:6023996|6024141 hsa-miR-6529-5p 0 1 0
chr7:6023996|6024141 hsa-miR-6884-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:6023996|6024141
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MYSAPQMISRQLRSLSCLCPALFPGTS
Nucleotide Sequence TTGTACTCCGCACCCCAGATGATCTCCAGGCAGCTCAGATCTCTTTCCTGCCTTTGCCCTGCACTGTTCCCCGGTACTTCC
CircID chr7:6023996|6024141
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MQSFVLRTPDDLQAAQISFLPLPCTVPRYFL
Nucleotide Sequence TTGCAAAGCTTTGTACTCCGCACCCCAGATGATCTCCAGGCAGCTCAGATCTCTTTCCTGCCTTTGCCCTGCACTGTTCCCCGGTACTTCCTC
CircID chr7:6023996|6024141
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MSCLEIIWGAEYKALQGCGFGMTLN
Nucleotide Sequence CTGAGCTGCCTGGAGATCATCTGGGGTGCGGAGTACAAAGCTTTGCAAGGGTGTGGTTTTGGAATGACGCTAAACTGA
CircID chr7:6023996|6024141
ORF Type ORF4
Protein Length 32
Nucleotide Length 96
Protein Sequence MPGDHLGCGVQSFARVWFWNDAKLKVERTDKK
Nucleotide Sequence CTGCCTGGAGATCATCTGGGGTGCGGAGTACAAAGCTTTGCAAGGGTGTGGTTTTGGAATGACGCTAAACTGAAGGTGGAGAGAACAGATAAAAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab