CircRNA Information

General Information
circRNA Basic Information
CircID chr7:66905655|66905776
Strand -
CircType exon
Host Gene ENSG00000273142.1;
Algorism CIRI2;
Sequence CAGGCCCACCTCCTGCCTTCCAGTAGCGTCTACAAGTTTGGCTCCTGCCTCCCATGGATCTCTCCAGGCCCCAAACTTTCTCAAGTCAACCTCACCAGGCCCGGCTTCTCCCTTTCATCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:66905655|66905776 hsa-miR-185-5p 0 0 1
chr7:66905655|66905776 hsa-miR-185-3p 0 0 1
chr7:66905655|66905776 hsa-miR-488-5p 0 0 1
chr7:66905655|66905776 hsa-miR-488-3p 0 0 1
chr7:66905655|66905776 hsa-miR-539-5p 0 0 1
chr7:66905655|66905776 hsa-miR-539-3p 0 0 1
chr7:66905655|66905776 hsa-miR-561-5p 0 0 1
chr7:66905655|66905776 hsa-miR-561-3p 0 0 1
chr7:66905655|66905776 hsa-miR-563 0 0 1
chr7:66905655|66905776 hsa-miR-580-5p 0 0 1
chr7:66905655|66905776 hsa-miR-580-3p 0 0 1
chr7:66905655|66905776 hsa-miR-650 0 0 1
chr7:66905655|66905776 hsa-miR-541-5p 0 0 1
chr7:66905655|66905776 hsa-miR-541-3p 0 0 1
chr7:66905655|66905776 hsa-miR-940 0 1 1
chr7:66905655|66905776 hsa-miR-1294 1 1 1
chr7:66905655|66905776 hsa-miR-1243 0 0 1
chr7:66905655|66905776 hsa-miR-1827 0 0 1
chr7:66905655|66905776 hsa-miR-654-5p 0 0 1
chr7:66905655|66905776 hsa-miR-1300 0 0 1
chr7:66905655|66905776 hsa-miR-1254 0 0 1
chr7:66905655|66905776 hsa-miR-661 1 0 0
chr7:66905655|66905776 hsa-miR-762 1 0 0
chr7:66905655|66905776 hsa-miR-1183 1 0 0
chr7:66905655|66905776 hsa-miR-1268a 1 0 0
chr7:66905655|66905776 hsa-miR-2861 1 1 0
chr7:66905655|66905776 hsa-miR-3141 1 0 0
chr7:66905655|66905776 hsa-miR-3154 1 0 0
chr7:66905655|66905776 hsa-miR-320e 1 0 0
chr7:66905655|66905776 hsa-miR-3195 1 0 0
chr7:66905655|66905776 hsa-miR-4260 0 1 0
chr7:66905655|66905776 hsa-miR-4254 0 1 0
chr7:66905655|66905776 hsa-miR-3714 0 1 0
chr7:66905655|66905776 hsa-miR-1268b 1 0 0
chr7:66905655|66905776 hsa-miR-4429 1 0 0
chr7:66905655|66905776 hsa-miR-4516 1 0 0
chr7:66905655|66905776 hsa-miR-4689 1 0 0
chr7:66905655|66905776 hsa-miR-4739 1 1 0
chr7:66905655|66905776 hsa-miR-5572 1 0 0
chr7:66905655|66905776 hsa-miR-5703 1 1 0
chr7:66905655|66905776 hsa-miR-5739 1 0 0
chr7:66905655|66905776 hsa-miR-6125 1 0 0
chr7:66905655|66905776 hsa-miR-6127 1 0 0
chr7:66905655|66905776 hsa-miR-6133 1 0 0
chr7:66905655|66905776 hsa-miR-8075 1 1 0
chr7:66905655|66905776 hsa-miR-8085 1 0 0
chr7:66905655|66905776 hsa-miR-8089 1 0 0
chr7:66905655|66905776 hsa-miR-9986 1 0 0
chr7:66905655|66905776 hsa-miR-12118 1 0 0
chr7:66905655|66905776 hsa-miR-370-3p 1 0 0
chr7:66905655|66905776 hsa-miR-6747-5p 1 0 0
chr7:66905655|66905776 hsa-miR-4433a-3p 1 0 0
chr7:66905655|66905776 hsa-miR-6765-5p 1 0 0
chr7:66905655|66905776 hsa-miR-671-5p 1 0 0
chr7:66905655|66905776 hsa-miR-3150a-3p 1 0 0
chr7:66905655|66905776 hsa-miR-7106-5p 1 0 0
chr7:66905655|66905776 hsa-miR-125a-3p 1 0 0
chr7:66905655|66905776 hsa-miR-6799-5p 1 0 0
chr7:66905655|66905776 hsa-miR-3692-5p 1 0 0
chr7:66905655|66905776 hsa-miR-139-3p 1 0 0
chr7:66905655|66905776 hsa-miR-1227-5p 0 1 0
chr7:66905655|66905776 hsa-miR-6089 1 0 0
chr7:66905655|66905776 hsa-miR-3192-5p 1 1 0
chr7:66905655|66905776 hsa-miR-4695-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6746-5p 1 0 0
chr7:66905655|66905776 hsa-miR-4722-5p 0 1 0
chr7:66905655|66905776 hsa-miR-6730-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6721-5p 1 1 0
chr7:66905655|66905776 hsa-miR-3682-3p 1 0 0
chr7:66905655|66905776 hsa-miR-432-5p 1 1 0
chr7:66905655|66905776 hsa-miR-7108-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6871-5p 0 1 0
chr7:66905655|66905776 hsa-miR-6796-5p 1 0 0
chr7:66905655|66905776 hsa-miR-3190-3p 1 0 0
chr7:66905655|66905776 hsa-miR-6798-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6760-5p 1 1 0
chr7:66905655|66905776 hsa-miR-30b-3p 0 1 0
chr7:66905655|66905776 hsa-miR-6786-5p 1 0 0
chr7:66905655|66905776 hsa-miR-7109-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6740-5p 1 1 0
chr7:66905655|66905776 hsa-miR-4738-3p 1 0 0
chr7:66905655|66905776 hsa-miR-4786-3p 1 0 0
chr7:66905655|66905776 hsa-miR-6784-5p 1 0 0
chr7:66905655|66905776 hsa-miR-4640-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6749-5p 1 1 0
chr7:66905655|66905776 hsa-miR-3202 1 0 0
chr7:66905655|66905776 hsa-miR-6824-5p 1 0 0
chr7:66905655|66905776 hsa-miR-423-5p 1 0 0
chr7:66905655|66905776 hsa-miR-3675-5p 0 1 0
chr7:66905655|66905776 hsa-miR-1207-5p 1 0 0
chr7:66905655|66905776 hsa-miR-1233-5p 1 0 0
chr7:66905655|66905776 hsa-miR-4763-3p 1 1 0
chr7:66905655|66905776 hsa-miR-6778-5p 1 1 0
chr7:66905655|66905776 hsa-miR-6812-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6893-5p 0 1 0
chr7:66905655|66905776 hsa-miR-6737-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6754-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6756-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6803-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6819-5p 1 0 0
chr7:66905655|66905776 hsa-miR-7107-5p 1 1 0
chr7:66905655|66905776 hsa-miR-1249-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6722-3p 1 0 0
chr7:66905655|66905776 hsa-miR-6751-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6779-5p 1 1 0
chr7:66905655|66905776 hsa-miR-6780a-5p 0 1 0
chr7:66905655|66905776 hsa-miR-6788-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6808-5p 1 1 0
chr7:66905655|66905776 hsa-miR-6879-5p 1 1 0
chr7:66905655|66905776 hsa-miR-4728-5p 1 0 0
chr7:66905655|66905776 hsa-miR-5196-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6780b-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6836-5p 1 0 0
chr7:66905655|66905776 hsa-miR-10396b-5p 1 0 0
chr7:66905655|66905776 hsa-miR-328-5p 1 1 0
chr7:66905655|66905776 hsa-miR-4649-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6794-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6846-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6848-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6885-5p 1 0 0
chr7:66905655|66905776 hsa-miR-4758-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6511a-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6731-5p 1 0 0
chr7:66905655|66905776 hsa-miR-3116 0 1 0
chr7:66905655|66905776 hsa-miR-10398-3p 1 0 0
chr7:66905655|66905776 hsa-miR-6785-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6724-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6791-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6762-5p 1 0 0
chr7:66905655|66905776 hsa-miR-6529-5p 0 1 0
chr7:66905655|66905776 hsa-miR-320a-3p 1 0 0
chr7:66905655|66905776 hsa-miR-320b 1 0 0
chr7:66905655|66905776 hsa-miR-320c 1 0 0
chr7:66905655|66905776 hsa-miR-320d 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:66905655|66905776
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MPSSSVYKFGSCLPWISPGPKLSQVNLTRPGFSLSS
Nucleotide Sequence CTGCCTTCCAGTAGCGTCTACAAGTTTGGCTCCTGCCTCCCATGGATCTCTCCAGGCCCCAAACTTTCTCAAGTCAACCTCACCAGGCCCGGCTTCTCCCTTTCATCA
CircID chr7:66905655|66905776
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MAPASHGSLQAPNFLKSTSPGPASPFHQ
Nucleotide Sequence TTGGCTCCTGCCTCCCATGGATCTCTCCAGGCCCCAAACTTTCTCAAGTCAACCTCACCAGGCCCGGCTTCTCCCTTTCATCAG
CircID chr7:66905655|66905776
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MPPMDLSRPQTFSSQPHQARLLPFIS
Nucleotide Sequence CTGCCTCCCATGGATCTCTCCAGGCCCCAAACTTTCTCAAGTCAACCTCACCAGGCCCGGCTTCTCCCTTTCATCAGC
CircID chr7:66905655|66905776
ORF Type ORF4
Protein Length 28
Nucleotide Length 84
Protein Sequence MRKFGAWRDPWEAGAKLVDATGRQEVGL
Nucleotide Sequence TTGAGAAAGTTTGGGGCCTGGAGAGATCCATGGGAGGCAGGAGCCAAACTTGTAGACGCTACTGGAAGGCAGGAGGTGGGCCTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab