CircRNA Information

General Information
circRNA Basic Information
CircID chr7:70790604|70790750
Strand -
CircType exon
Host Gene ENSG00000158321.14;
Algorism CIRI2;
Sequence CACCACCACCACCCGCTGTCTGTGGACCCTCGGCGGGAGCACGAGCGGGGAGGCCACCTGGACGAGCGGGAGCGCTTGCACATGCTCAGAGAAGACTACGAGCACACGCGGCTCCACTCCGTGCACCCCGCCTCCCTCGACGGACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:70790604|70790750 hsa-miR-19a-5p 0 0 1
chr7:70790604|70790750 hsa-miR-19a-3p 0 0 1
chr7:70790604|70790750 hsa-miR-518e-5p 0 0 1
chr7:70790604|70790750 hsa-miR-518e-3p 0 0 1
chr7:70790604|70790750 hsa-miR-942-5p 0 0 1
chr7:70790604|70790750 hsa-miR-942-3p 0 0 1
chr7:70790604|70790750 hsa-miR-1293 0 0 1
chr7:70790604|70790750 hsa-miR-1321 0 0 1
chr7:70790604|70790750 hsa-miR-1324 0 0 1
chr7:70790604|70790750 hsa-miR-876-3p 0 0 1
chr7:70790604|70790750 hsa-miR-342-5p 0 0 1
chr7:70790604|70790750 hsa-miR-323-5p 0 0 1
chr7:70790604|70790750 hsa-miR-19b 0 0 1
chr7:70790604|70790750 hsa-miR-886-3p 0 0 1
chr7:70790604|70790750 hsa-miR-663 0 0 1
chr7:70790604|70790750 hsa-miR-572 0 1 0
chr7:70790604|70790750 hsa-miR-608 0 1 0
chr7:70790604|70790750 hsa-miR-663a 1 1 0
chr7:70790604|70790750 hsa-miR-1264 0 1 0
chr7:70790604|70790750 hsa-miR-3921 0 1 0
chr7:70790604|70790750 hsa-miR-4510 0 1 0
chr7:70790604|70790750 hsa-miR-4669 0 1 0
chr7:70790604|70790750 hsa-miR-4739 1 1 0
chr7:70790604|70790750 hsa-miR-6129 0 1 0
chr7:70790604|70790750 hsa-miR-6130 0 1 0
chr7:70790604|70790750 hsa-miR-6133 0 1 0
chr7:70790604|70790750 hsa-miR-12115 1 1 0
chr7:70790604|70790750 hsa-miR-7114-5p 1 0 0
chr7:70790604|70790750 hsa-miR-6741-5p 0 1 0
chr7:70790604|70790750 hsa-miR-6727-5p 1 0 0
chr7:70790604|70790750 hsa-miR-6772-5p 1 1 0
chr7:70790604|70790750 hsa-miR-885-3p 0 1 0
chr7:70790604|70790750 hsa-miR-1908-5p 0 1 0
chr7:70790604|70790750 hsa-miR-6878-3p 0 1 0
chr7:70790604|70790750 hsa-miR-6787-5p 0 1 0
chr7:70790604|70790750 hsa-miR-6812-5p 1 1 0
chr7:70790604|70790750 hsa-miR-10396b-5p 0 1 0
chr7:70790604|70790750 hsa-miR-328-5p 1 0 0
chr7:70790604|70790750 hsa-miR-4756-5p 0 1 0
chr7:70790604|70790750 hsa-miR-4653-5p 0 1 0
chr7:70790604|70790750 hsa-miR-4659a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr7:70790604|70790750
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MSVDPRREHERGGHLDERERLHMLREDYEHTRLHSVHPASLDGH
Nucleotide Sequence CTGTCTGTGGACCCTCGGCGGGAGCACGAGCGGGGAGGCCACCTGGACGAGCGGGAGCGCTTGCACATGCTCAGAGAAGACTACGAGCACACGCGGCTCCACTCCGTGCACCCCGCCTCCCTCGACGGACAC

CircID chr7:70790604|70790750
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MWTLGGSTSGEATWTSGSACTCSEKTTSTRGSTPCTPPPSTD
Nucleotide Sequence CTGTGGACCCTCGGCGGGAGCACGAGCGGGGAGGCCACCTGGACGAGCGGGAGCGCTTGCACATGCTCAGAGAAGACTACGAGCACACGCGGCTCCACTCCGTGCACCCCGCCTCCCTCGACGGAC

CircID chr7:70790604|70790750
ORF Type ORF3
Protein Length 29
Nucleotide Length 87
Protein Sequence MSMCKRSRSSRWPPRSCSRRGSTDSGWWW
Nucleotide Sequence CTGAGCATGTGCAAGCGCTCCCGCTCGTCCAGGTGGCCTCCCCGCTCGTGCTCCCGCCGAGGGTCCACAGACAGCGGGTGGTGGTGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites