CircRNA Information

General Information
circRNA Basic Information
CircID chr7:73573938|73574114
Strand -
CircType exon
Host Gene ENSG00000106638.14;
Algorism CIRI2;
Sequence CTGCAGTCAGGGCTGAAGCGCACCAGGGTGGCGTGGTCCAGCTCCACGTTGGCTCTCATGCTGCGGTGCTCTCGCTGCAGGAAGTCCTTGGTGCTCCAGATGCGGATGGTGCGATCATCTGCACAGGTAGCCAGGTATTTGCCATTGCTGCTAAAGTCCATGCAAGATATGTTCCCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:73573938|73574114 hsa-miR-15a-5p 0 0 1
chr7:73573938|73574114 hsa-miR-15a-3p 0 0 1
chr7:73573938|73574114 hsa-miR-29a-5p 0 0 1
chr7:73573938|73574114 hsa-miR-29a-3p 0 0 1
chr7:73573938|73574114 hsa-miR-107 0 0 1
chr7:73573938|73574114 hsa-miR-15b-5p 0 0 1
chr7:73573938|73574114 hsa-miR-15b-3p 0 0 1
chr7:73573938|73574114 hsa-miR-195-5p 0 0 1
chr7:73573938|73574114 hsa-miR-195-3p 0 0 1
chr7:73573938|73574114 hsa-miR-29c-5p 0 0 1
chr7:73573938|73574114 hsa-miR-29c-3p 0 0 1
chr7:73573938|73574114 hsa-miR-424-5p 0 0 1
chr7:73573938|73574114 hsa-miR-424-3p 0 0 1
chr7:73573938|73574114 hsa-miR-497-5p 0 0 1
chr7:73573938|73574114 hsa-miR-497-3p 0 0 1
chr7:73573938|73574114 hsa-miR-503-5p 0 0 1
chr7:73573938|73574114 hsa-miR-503-3p 0 0 1
chr7:73573938|73574114 hsa-miR-617 0 0 1
chr7:73573938|73574114 hsa-miR-619-5p 0 0 1
chr7:73573938|73574114 hsa-miR-619-3p 0 0 1
chr7:73573938|73574114 hsa-miR-646 0 0 1
chr7:73573938|73574114 hsa-miR-675-5p 0 0 1
chr7:73573938|73574114 hsa-miR-675-3p 0 0 1
chr7:73573938|73574114 hsa-miR-767-5p 0 0 1
chr7:73573938|73574114 hsa-miR-1184 0 0 1
chr7:73573938|73574114 hsa-miR-509-3-5p 0 0 1
chr7:73573938|73574114 hsa-miR-509-5p 0 0 1
chr7:73573938|73574114 hsa-miR-103 0 0 1
chr7:73573938|73574114 hsa-miR-16 0 0 1
chr7:73573938|73574114 hsa-miR-516b 0 0 1
chr7:73573938|73574114 hsa-miR-29b 0 0 1
chr7:73573938|73574114 hsa-miR-1292-5p 1 0 0
chr7:73573938|73574114 hsa-miR-6762-5p 1 0 0
chr7:73573938|73574114 hsa-miR-6838-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr7:73573938|73574114
ORF Type ORF1
Protein Length 59
Nucleotide Length 177
Protein Sequence LQSGLKRTRVAWSSSTLALMLRCSRCRKSLVLQMRMVRSSAQVARYLPLLLKSMQDMFP
Nucleotide Sequence CTGCAGTCAGGGCTGAAGCGCACCAGGGTGGCGTGGTCCAGCTCCACGTTGGCTCTCATGCTGCGGTGCTCTCGCTGCAGGAAGTCCTTGGTGCTCCAGATGCGGATGGTGCGATCATCTGCACAGGTAGCCAGGTATTTGCCATTGCTGCTAAAGTCCATGCAAGATATGTTCCCG

CircID chr7:73573938|73574114
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MQEVLGAPDADGAIICTGSQVFAIAAKVHARYVP
Nucleotide Sequence CTGCAGGAAGTCCTTGGTGCTCCAGATGCGGATGGTGCGATCATCTGCACAGGTAGCCAGGTATTTGCCATTGCTGCTAAAGTCCATGCAAGATATGTTCCC

CircID chr7:73573938|73574114
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MEHQGLPAARAPQHESQRGAGPRHPGALQP
Nucleotide Sequence CTGGAGCACCAAGGACTTCCTGCAGCGAGAGCACCGCAGCATGAGAGCCAACGTGGAGCTGGACCACGCCACCCTGGTGCGCTTCAGCCCTGA

CircID chr7:73573938|73574114
ORF Type ORF4
Protein Length 53
Nucleotide Length 159
Protein Sequence MDFSSNGKYLATCADDRTIRIWSTKDFLQREHRSMRANVELDHATLVRFSPDC
Nucleotide Sequence ATGGACTTTAGCAGCAATGGCAAATACCTGGCTACCTGTGCAGATGATCGCACCATCCGCATCTGGAGCACCAAGGACTTCCTGCAGCGAGAGCACCGCAGCATGAGAGCCAACGTGGAGCTGGACCACGCCACCCTGGTGCGCTTCAGCCCTGACTGC

CircID chr7:73573938|73574114
ORF Type ORF5
Protein Length 29
Nucleotide Length 90
Protein Sequence MANTWLPVQMIAPSASGAPRTSCSESTAA
Nucleotide Sequence ATGGCAAATACCTGGCTACCTGTGCAGATGATCGCACCATCCGCATCTGGAGCACCAAGGACTTCCTGCAGCGAGAGCACCGCAGCATGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites