CircRNA Information

General Information
circRNA Basic Information
CircID chr7:73831894|73832096
Strand +
CircType exon
Host Gene ENSG00000189143.9;
Algorism CIRI2;
Sequence CACCACACCCTGTCACTTCCGTCCCTCCCCAATATCCAGAGGAGGGTGGACTCTGTTCTTGCTAGCAGGAGGCGGCCTTGGGAAGTTGTCCGAGTGGGCCAGAGAGGCTGAAGGCTGCTGCCTTCCTGCCTGGCTCAGTCTCTGCCCAGTCCCCAGTCCCCAGCAGCCAGTGGCCCGTGGCAGGGCCCTCCTGGGGTCACAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:73831894|73832096 hsa-miR-184 0 1 1
chr7:73831894|73832096 hsa-miR-370-5p 0 0 1
chr7:73831894|73832096 hsa-miR-370-3p 0 0 1
chr7:73831894|73832096 hsa-miR-326 0 0 1
chr7:73831894|73832096 hsa-miR-604 0 0 1
chr7:73831894|73832096 hsa-miR-612 1 1 1
chr7:73831894|73832096 hsa-miR-621 0 1 1
chr7:73831894|73832096 hsa-miR-647 0 0 1
chr7:73831894|73832096 hsa-miR-892b 0 1 1
chr7:73831894|73832096 hsa-miR-665 0 0 1
chr7:73831894|73832096 hsa-miR-939-5p 0 0 1
chr7:73831894|73832096 hsa-miR-939-3p 0 0 1
chr7:73831894|73832096 hsa-miR-940 0 0 1
chr7:73831894|73832096 hsa-miR-1291 0 0 1
chr7:73831894|73832096 hsa-miR-1281 0 1 1
chr7:73831894|73832096 hsa-miR-330-5p 0 0 1
chr7:73831894|73832096 hsa-miR-542-3p 0 0 1
chr7:73831894|73832096 hsa-miR-1285 0 0 1
chr7:73831894|73832096 hsa-miR-549 0 0 1
chr7:73831894|73832096 hsa-miR-637 1 0 0
chr7:73831894|73832096 hsa-miR-650 0 1 0
chr7:73831894|73832096 hsa-miR-762 1 1 0
chr7:73831894|73832096 hsa-miR-2861 1 0 0
chr7:73831894|73832096 hsa-miR-3132 1 1 0
chr7:73831894|73832096 hsa-miR-3147 1 0 0
chr7:73831894|73832096 hsa-miR-3183 0 1 0
chr7:73831894|73832096 hsa-miR-3714 0 1 0
chr7:73831894|73832096 hsa-miR-4463 1 0 0
chr7:73831894|73832096 hsa-miR-4499 0 1 0
chr7:73831894|73832096 hsa-miR-4514 0 1 0
chr7:73831894|73832096 hsa-miR-4515 1 1 0
chr7:73831894|73832096 hsa-miR-1587 1 0 0
chr7:73831894|73832096 hsa-miR-4656 1 0 0
chr7:73831894|73832096 hsa-miR-4673 0 1 0
chr7:73831894|73832096 hsa-miR-4692 0 1 0
chr7:73831894|73832096 hsa-miR-4734 1 0 0
chr7:73831894|73832096 hsa-miR-5787 1 0 0
chr7:73831894|73832096 hsa-miR-6085 1 0 0
chr7:73831894|73832096 hsa-miR-6860 0 1 0
chr7:73831894|73832096 hsa-miR-8052 1 1 0
chr7:73831894|73832096 hsa-miR-8089 1 1 0
chr7:73831894|73832096 hsa-miR-12121 0 1 0
chr7:73831894|73832096 hsa-miR-4731-5p 1 0 0
chr7:73831894|73832096 hsa-miR-6840-3p 0 1 0
chr7:73831894|73832096 hsa-miR-3194-3p 1 1 0
chr7:73831894|73832096 hsa-miR-6825-5p 0 1 0
chr7:73831894|73832096 hsa-miR-6857-5p 1 1 0
chr7:73831894|73832096 hsa-miR-4687-3p 1 0 0
chr7:73831894|73832096 hsa-miR-3692-5p 1 1 0
chr7:73831894|73832096 hsa-miR-6807-5p 0 1 0
chr7:73831894|73832096 hsa-miR-6757-5p 0 1 0
chr7:73831894|73832096 hsa-miR-4722-5p 1 1 0
chr7:73831894|73832096 hsa-miR-3064-5p 0 1 0
chr7:73831894|73832096 hsa-miR-4755-3p 0 1 0
chr7:73831894|73832096 hsa-miR-6741-5p 1 0 0
chr7:73831894|73832096 hsa-miR-197-5p 1 0 0
chr7:73831894|73832096 hsa-miR-6817-3p 0 1 0
chr7:73831894|73832096 hsa-miR-6716-5p 1 0 0
chr7:73831894|73832096 hsa-miR-6829-5p 1 0 0
chr7:73831894|73832096 hsa-miR-3126-5p 0 1 0
chr7:73831894|73832096 hsa-miR-6810-5p 1 1 0
chr7:73831894|73832096 hsa-miR-1908-3p 1 0 0
chr7:73831894|73832096 hsa-miR-4640-5p 1 0 0
chr7:73831894|73832096 hsa-miR-3191-5p 0 1 0
chr7:73831894|73832096 hsa-miR-92b-5p 1 1 0
chr7:73831894|73832096 hsa-miR-6749-5p 1 0 0
chr7:73831894|73832096 hsa-miR-4446-3p 1 0 0
chr7:73831894|73832096 hsa-miR-149-3p 1 1 0
chr7:73831894|73832096 hsa-miR-7160-3p 0 1 0
chr7:73831894|73832096 hsa-miR-3191-3p 1 0 0
chr7:73831894|73832096 hsa-miR-4652-5p 0 1 0
chr7:73831894|73832096 hsa-miR-660-3p 0 1 0
chr7:73831894|73832096 hsa-miR-628-3p 0 1 0
chr7:73831894|73832096 hsa-miR-6814-5p 0 1 0
chr7:73831894|73832096 hsa-miR-3614-3p 0 1 0
chr7:73831894|73832096 hsa-miR-4797-5p 0 1 0
chr7:73831894|73832096 hsa-miR-4763-3p 1 1 0
chr7:73831894|73832096 hsa-miR-6816-5p 1 0 0
chr7:73831894|73832096 hsa-miR-5001-5p 1 0 0
chr7:73831894|73832096 hsa-miR-6726-5p 1 0 0
chr7:73831894|73832096 hsa-miR-6756-5p 1 0 0
chr7:73831894|73832096 hsa-miR-6803-5p 0 1 0
chr7:73831894|73832096 hsa-miR-6813-5p 1 0 0
chr7:73831894|73832096 hsa-miR-1249-5p 0 1 0
chr7:73831894|73832096 hsa-miR-6763-5p 1 1 0
chr7:73831894|73832096 hsa-miR-6797-5p 0 1 0
chr7:73831894|73832096 hsa-miR-6808-5p 0 1 0
chr7:73831894|73832096 hsa-miR-6875-5p 0 1 0
chr7:73831894|73832096 hsa-miR-3620-5p 1 0 0
chr7:73831894|73832096 hsa-miR-4728-5p 0 1 0
chr7:73831894|73832096 hsa-miR-5189-5p 1 1 0
chr7:73831894|73832096 hsa-miR-6836-5p 1 0 0
chr7:73831894|73832096 hsa-miR-1237-5p 1 0 0
chr7:73831894|73832096 hsa-miR-6795-5p 0 1 0
chr7:73831894|73832096 hsa-miR-6846-5p 1 1 0
chr7:73831894|73832096 hsa-miR-6848-5p 1 1 0
chr7:73831894|73832096 hsa-miR-6858-5p 1 0 0
chr7:73831894|73832096 hsa-miR-6883-5p 0 1 0
chr7:73831894|73832096 hsa-miR-6887-5p 0 1 0
chr7:73831894|73832096 hsa-miR-3187-5p 0 1 0
chr7:73831894|73832096 hsa-miR-3199 0 1 0
chr7:73831894|73832096 hsa-miR-365a-5p 1 0 0
chr7:73831894|73832096 hsa-miR-365b-5p 1 0 0
chr7:73831894|73832096 hsa-miR-1285-3p 0 1 0
chr7:73831894|73832096 hsa-miR-6799-3p 0 1 0
chr7:73831894|73832096 hsa-miR-7843-5p 0 1 0
chr7:73831894|73832096 hsa-miR-6855-5p 1 0 0
chr7:73831894|73832096 hsa-miR-4700-5p 0 1 0
chr7:73831894|73832096 hsa-miR-6876-5p 0 1 0
chr7:73831894|73832096 hsa-miR-6785-5p 0 1 0
chr7:73831894|73832096 hsa-miR-4667-5p 0 1 0
chr7:73831894|73832096 hsa-miR-4722-3p 0 1 0
chr7:73831894|73832096 hsa-miR-6801-3p 1 0 0
chr7:73831894|73832096 hsa-miR-6775-3p 0 1 0
chr7:73831894|73832096 hsa-miR-4723-3p 1 1 0
chr7:73831894|73832096 hsa-miR-6769b-3p 0 1 0
chr7:73831894|73832096 hsa-miR-6819-3p 0 1 0
chr7:73831894|73832096 hsa-miR-3085-3p 0 1 0
chr7:73831894|73832096 hsa-miR-7973 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:73831894|73832096
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MSLPSLPNIQRRVDSVLASRRRPWEVVRVGQRG
Nucleotide Sequence CTGTCACTTCCGTCCCTCCCCAATATCCAGAGGAGGGTGGACTCTGTTCTTGCTAGCAGGAGGCGGCCTTGGGAAGTTGTCCGAGTGGGCCAGAGAGGCTGA
CircID chr7:73831894|73832096
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MLPSCLAQSLPSPQSPAASGPWQGPPGVT
Nucleotide Sequence CTGCTGCCTTCCTGCCTGGCTCAGTCTCTGCCCAGTCCCCAGTCCCCAGCAGCCAGTGGCCCGTGGCAGGGCCCTCCTGGGGTCACA
CircID chr7:73831894|73832096
ORF Type ORF3
Protein Length 50
Nucleotide Length 150
Protein Sequence MFLLAGGGLGKLSEWAREAEGCCLPAWLSLCPVPSPQQPVARGRALLGSQ
Nucleotide Sequence CTGTTCTTGCTAGCAGGAGGCGGCCTTGGGAAGTTGTCCGAGTGGGCCAGAGAGGCTGAAGGCTGCTGCCTTCCTGCCTGGCTCAGTCTCTGCCCAGTCCCCAGTCCCCAGCAGCCAGTGGCCCGTGGCAGGGCCCTCCTGGGGTCACAG
CircID chr7:73831894|73832096
ORF Type ORF4
Protein Length 42
Nucleotide Length 126
Protein Sequence MGSCPSGPERLKAAAFLPGSVSAQSPVPSSQWPVAGPSWGHS
Nucleotide Sequence TTGGGAAGTTGTCCGAGTGGGCCAGAGAGGCTGAAGGCTGCTGCCTTCCTGCCTGGCTCAGTCTCTGCCCAGTCCCCAGTCCCCAGCAGCCAGTGGCCCGTGGCAGGGCCCTCCTGGGGTCACAGC
CircID chr7:73831894|73832096
ORF Type ORF5
Protein Length 34
Nucleotide Length 105
Protein Sequence MLGTGDWAETEPGRKAAAFSLSGPLGQLPKAASC
Nucleotide Sequence CTGCTGGGGACTGGGGACTGGGCAGAGACTGAGCCAGGCAGGAAGGCAGCAGCCTTCAGCCTCTCTGGCCCACTCGGACAACTTCCCAAGGCCGCCTCCTGCTAG
CircID chr7:73831894|73832096
ORF Type ORF6
Protein Length 56
Nucleotide Length 171
Protein Sequence MPRATGCWGLGTGQRLSQAGRQQPSASLAHSDNFPRPPPASKNRVHPPLDIGEGRK
Nucleotide Sequence CTGCCACGGGCCACTGGCTGCTGGGGACTGGGGACTGGGCAGAGACTGAGCCAGGCAGGAAGGCAGCAGCCTTCAGCCTCTCTGGCCCACTCGGACAACTTCCCAAGGCCGCCTCCTGCTAGCAAGAACAGAGTCCACCCTCCTCTGGATATTGGGGAGGGACGGAAGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab