CircRNA Information

General Information
circRNA Basic Information
CircID chr7:73832189|73832312
Strand -
CircType exon
Host Gene ENSG00000189143.9;
Algorism CIRI2;
Sequence ATTTTCCCCACTCTGTCTGCCTGCATCTCCTCTGTTCCGGGTAGGCCTTGATATCACCTCTGGGACTGTGCCTTGCTCACCGAAACCCGCGCCCAGGAGTATGGCTGAGGCCTTGCCCACCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:73832189|73832312 hsa-miR-506-5p 0 0 1
chr7:73832189|73832312 hsa-miR-506-3p 0 0 1
chr7:73832189|73832312 hsa-miR-541-5p 0 0 1
chr7:73832189|73832312 hsa-miR-541-3p 0 0 1
chr7:73832189|73832312 hsa-miR-1293 0 0 1
chr7:73832189|73832312 hsa-miR-1324 0 0 1
chr7:73832189|73832312 hsa-miR-491-5p 0 0 1
chr7:73832189|73832312 hsa-miR-941 0 0 1
chr7:73832189|73832312 hsa-miR-654-5p 0 0 1
chr7:73832189|73832312 hsa-miR-124 0 0 1
chr7:73832189|73832312 hsa-miR-564 1 0 0
chr7:73832189|73832312 hsa-miR-612 1 1 0
chr7:73832189|73832312 hsa-miR-1268a 1 0 0
chr7:73832189|73832312 hsa-miR-1469 1 0 0
chr7:73832189|73832312 hsa-miR-2861 1 0 0
chr7:73832189|73832312 hsa-miR-3178 1 0 0
chr7:73832189|73832312 hsa-miR-3621 1 0 0
chr7:73832189|73832312 hsa-miR-1268b 1 0 0
chr7:73832189|73832312 hsa-miR-4466 1 0 0
chr7:73832189|73832312 hsa-miR-3689e 0 1 0
chr7:73832189|73832312 hsa-miR-3689f 0 1 0
chr7:73832189|73832312 hsa-miR-4488 1 0 0
chr7:73832189|73832312 hsa-miR-4514 1 1 0
chr7:73832189|73832312 hsa-miR-4634 1 0 0
chr7:73832189|73832312 hsa-miR-4651 1 0 0
chr7:73832189|73832312 hsa-miR-4688 1 0 0
chr7:73832189|73832312 hsa-miR-4706 1 0 0
chr7:73832189|73832312 hsa-miR-4734 1 0 0
chr7:73832189|73832312 hsa-miR-4784 1 1 0
chr7:73832189|73832312 hsa-miR-5705 0 1 0
chr7:73832189|73832312 hsa-miR-6081 1 0 0
chr7:73832189|73832312 hsa-miR-6860 1 0 0
chr7:73832189|73832312 hsa-miR-150-3p 1 0 0
chr7:73832189|73832312 hsa-miR-3157-5p 0 1 0
chr7:73832189|73832312 hsa-miR-3622a-5p 1 0 0
chr7:73832189|73832312 hsa-miR-6741-5p 1 0 0
chr7:73832189|73832312 hsa-miR-6759-5p 0 1 0
chr7:73832189|73832312 hsa-miR-6748-5p 0 1 0
chr7:73832189|73832312 hsa-miR-6793-5p 1 0 0
chr7:73832189|73832312 hsa-miR-6888-5p 1 1 0
chr7:73832189|73832312 hsa-miR-1226-5p 1 0 0
chr7:73832189|73832312 hsa-miR-1228-5p 1 0 0
chr7:73832189|73832312 hsa-miR-877-5p 1 1 0
chr7:73832189|73832312 hsa-miR-6847-5p 0 1 0
chr7:73832189|73832312 hsa-miR-3922-5p 0 1 0
chr7:73832189|73832312 hsa-miR-4708-3p 0 1 0
chr7:73832189|73832312 hsa-miR-2277-5p 1 1 0
chr7:73832189|73832312 hsa-miR-6787-5p 1 0 0
chr7:73832189|73832312 hsa-miR-6816-5p 1 0 0
chr7:73832189|73832312 hsa-miR-6893-5p 1 0 0
chr7:73832189|73832312 hsa-miR-6743-5p 1 0 0
chr7:73832189|73832312 hsa-miR-6756-5p 1 0 0
chr7:73832189|73832312 hsa-miR-6803-5p 1 0 0
chr7:73832189|73832312 hsa-miR-6851-5p 0 1 0
chr7:73832189|73832312 hsa-miR-6808-5p 1 0 0
chr7:73832189|73832312 hsa-miR-6836-5p 0 1 0
chr7:73832189|73832312 hsa-miR-1237-5p 1 0 0
chr7:73832189|73832312 hsa-miR-4649-5p 1 0 0
chr7:73832189|73832312 hsa-miR-4726-5p 1 0 0
chr7:73832189|73832312 hsa-miR-6729-5p 1 0 0
chr7:73832189|73832312 hsa-miR-675-5p 1 0 0
chr7:73832189|73832312 hsa-miR-6858-5p 0 1 0
chr7:73832189|73832312 hsa-miR-939-5p 1 0 0
chr7:73832189|73832312 hsa-miR-10394-3p 1 1 0
chr7:73832189|73832312 hsa-miR-6511a-5p 1 1 0
chr7:73832189|73832312 hsa-miR-6511b-5p 1 1 0
chr7:73832189|73832312 hsa-miR-3679-5p 1 0 0
chr7:73832189|73832312 hsa-miR-6766-5p 0 1 0
chr7:73832189|73832312 hsa-miR-6724-5p 1 0 0
chr7:73832189|73832312 hsa-miR-3689a-5p 0 1 0
chr7:73832189|73832312 hsa-miR-3689b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:73832189|73832312
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MPASPLFRVGLDITSGTVPCSPKPAPRSMAEALPTH
Nucleotide Sequence CTGCCTGCATCTCCTCTGTTCCGGGTAGGCCTTGATATCACCTCTGGGACTGTGCCTTGCTCACCGAAACCCGCGCCCAGGAGTATGGCTGAGGCCTTGCCCACCCAC
CircID chr7:73832189|73832312
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MISPLGLCLAHRNPRPGVWLRPCPP
Nucleotide Sequence TTGATATCACCTCTGGGACTGTGCCTTGCTCACCGAAACCCGCGCCCAGGAGTATGGCTGAGGCCTTGCCCACCC
CircID chr7:73832189|73832312
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MGAGFGEQGTVPEVISRPTRNRGDAGRQSGEN
Nucleotide Sequence CTGGGCGCGGGTTTCGGTGAGCAAGGCACAGTCCCAGAGGTGATATCAAGGCCTACCCGGAACAGAGGAGATGCAGGCAGACAGAGTGGGGAAAAT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab