CircRNA Information

General Information
circRNA Basic Information
CircID chr7:74063313|74063695
Strand +
CircType exon
Host Gene ENSG00000049540.15;
Algorism CIRI2;
Sequence CTCCAAGGCCCCCAACACCTGGAACTCCAAGCCCTCCGACTCCGAGTCCTCCGAGCCCAGCGGCTCCCACTAGGCCTGTGGAGACAGCTGAGCATTAGACTCCGCTGGTCAGAAAGGTGGGACTGAAGCCTCGGCCTGTGGAGGGCGGAGGTGTCCTCTGGGGACACAGGTGGAGCCTGAGGTCTCCCCTGGCCTTCGATGGCACAGTGGAGCCAGGAGGTGTCTGGGGCAGGGACTCTGAGTCTACAGTGCCTGGTCAGAAGCTCCTCCCACACCCTGGGGGCCTGGGGGCCTGGCGGCAGCTCCCACCTCCACCCAGTGCTCACCAAACTGGGCGGCTTTGGCAGCAGCTTTGGCTGCGGCAGCGGCGGCGGCGGGTCCGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:74063313|74063695 hsa-miR-22-5p 0 0 1
chr7:74063313|74063695 hsa-miR-22-3p 0 0 1
chr7:74063313|74063695 hsa-miR-149-5p 0 0 1
chr7:74063313|74063695 hsa-miR-149-3p 0 0 1
chr7:74063313|74063695 hsa-miR-320a-5p 0 0 1
chr7:74063313|74063695 hsa-miR-320a-3p 0 0 1
chr7:74063313|74063695 hsa-miR-155-5p 0 0 1
chr7:74063313|74063695 hsa-miR-155-3p 0 0 1
chr7:74063313|74063695 hsa-miR-484 0 0 1
chr7:74063313|74063695 hsa-miR-432-5p 0 0 1
chr7:74063313|74063695 hsa-miR-432-3p 0 0 1
chr7:74063313|74063695 hsa-miR-558 0 1 1
chr7:74063313|74063695 hsa-miR-626 0 0 1
chr7:74063313|74063695 hsa-miR-765 0 0 1
chr7:74063313|74063695 hsa-miR-708-5p 0 0 1
chr7:74063313|74063695 hsa-miR-708-3p 0 0 1
chr7:74063313|74063695 hsa-miR-920 0 0 1
chr7:74063313|74063695 hsa-miR-1183 0 0 1
chr7:74063313|74063695 hsa-miR-1227-5p 0 0 1
chr7:74063313|74063695 hsa-miR-1227-3p 0 0 1
chr7:74063313|74063695 hsa-miR-1293 0 0 1
chr7:74063313|74063695 hsa-miR-1275 0 0 1
chr7:74063313|74063695 hsa-miR-1197 0 0 1
chr7:74063313|74063695 hsa-miR-769-5p 0 1 1
chr7:74063313|74063695 hsa-miR-361-3p 0 1 1
chr7:74063313|74063695 hsa-miR-1224-3p 0 0 1
chr7:74063313|74063695 hsa-miR-28-5p 0 0 1
chr7:74063313|74063695 hsa-miR-1207-3p 0 0 1
chr7:74063313|74063695 hsa-miR-324-3p 0 0 1
chr7:74063313|74063695 hsa-miR-320b 0 0 1
chr7:74063313|74063695 hsa-miR-320c 0 0 1
chr7:74063313|74063695 hsa-miR-320d 0 0 1
chr7:74063313|74063695 hsa-miR-455-3p 0 0 1
chr7:74063313|74063695 hsa-miR-1260 0 0 1
chr7:74063313|74063695 hsa-miR-1280 0 0 1
chr7:74063313|74063695 hsa-miR-608 0 1 0
chr7:74063313|74063695 hsa-miR-612 1 0 0
chr7:74063313|74063695 hsa-miR-637 1 0 0
chr7:74063313|74063695 hsa-miR-658 1 0 0
chr7:74063313|74063695 hsa-miR-762 1 0 0
chr7:74063313|74063695 hsa-miR-1181 1 0 0
chr7:74063313|74063695 hsa-miR-1260a 0 1 0
chr7:74063313|74063695 hsa-miR-1268a 1 0 0
chr7:74063313|74063695 hsa-miR-1913 1 1 0
chr7:74063313|74063695 hsa-miR-2861 1 0 0
chr7:74063313|74063695 hsa-miR-3131 1 0 0
chr7:74063313|74063695 hsa-miR-3147 1 0 0
chr7:74063313|74063695 hsa-miR-3155a 0 1 0
chr7:74063313|74063695 hsa-miR-4305 0 1 0
chr7:74063313|74063695 hsa-miR-4269 1 0 0
chr7:74063313|74063695 hsa-miR-3943 1 0 0
chr7:74063313|74063695 hsa-miR-1268b 1 0 0
chr7:74063313|74063695 hsa-miR-378g 0 1 0
chr7:74063313|74063695 hsa-miR-4440 1 0 0
chr7:74063313|74063695 hsa-miR-4447 0 1 0
chr7:74063313|74063695 hsa-miR-4462 1 0 0
chr7:74063313|74063695 hsa-miR-3155b 0 1 0
chr7:74063313|74063695 hsa-miR-4505 1 0 0
chr7:74063313|74063695 hsa-miR-4507 1 0 0
chr7:74063313|74063695 hsa-miR-4674 1 1 0
chr7:74063313|74063695 hsa-miR-4721 1 1 0
chr7:74063313|74063695 hsa-miR-4739 1 0 0
chr7:74063313|74063695 hsa-miR-4741 1 0 0
chr7:74063313|74063695 hsa-miR-6090 1 0 0
chr7:74063313|74063695 hsa-miR-8081 0 1 0
chr7:74063313|74063695 hsa-miR-8089 1 0 0
chr7:74063313|74063695 hsa-miR-12114 0 1 0
chr7:74063313|74063695 hsa-miR-12115 0 1 0
chr7:74063313|74063695 hsa-miR-4747-3p 1 0 0
chr7:74063313|74063695 hsa-miR-4726-3p 1 0 0
chr7:74063313|74063695 hsa-miR-6861-5p 1 0 0
chr7:74063313|74063695 hsa-miR-6894-5p 1 0 0
chr7:74063313|74063695 hsa-miR-1972 1 0 0
chr7:74063313|74063695 hsa-miR-8071 1 0 0
chr7:74063313|74063695 hsa-miR-6880-5p 0 1 0
chr7:74063313|74063695 hsa-miR-7847-3p 1 0 0
chr7:74063313|74063695 hsa-miR-4653-3p 1 0 0
chr7:74063313|74063695 hsa-miR-7154-3p 0 1 0
chr7:74063313|74063695 hsa-miR-4755-3p 0 1 0
chr7:74063313|74063695 hsa-miR-4753-5p 0 1 0
chr7:74063313|74063695 hsa-miR-874-5p 1 0 0
chr7:74063313|74063695 hsa-miR-6741-5p 1 1 0
chr7:74063313|74063695 hsa-miR-3189-5p 1 0 0
chr7:74063313|74063695 hsa-miR-6776-5p 0 1 0
chr7:74063313|74063695 hsa-miR-6787-3p 0 1 0
chr7:74063313|74063695 hsa-miR-6732-5p 1 0 0
chr7:74063313|74063695 hsa-miR-6827-5p 0 1 0
chr7:74063313|74063695 hsa-miR-23a-5p 0 1 0
chr7:74063313|74063695 hsa-miR-1224-5p 1 0 0
chr7:74063313|74063695 hsa-miR-6782-5p 1 0 0
chr7:74063313|74063695 hsa-miR-5088-5p 1 1 0
chr7:74063313|74063695 hsa-miR-7109-5p 1 0 0
chr7:74063313|74063695 hsa-miR-4763-5p 1 0 0
chr7:74063313|74063695 hsa-miR-6763-3p 1 0 0
chr7:74063313|74063695 hsa-miR-4707-3p 0 1 0
chr7:74063313|74063695 hsa-miR-4783-3p 1 0 0
chr7:74063313|74063695 hsa-miR-6749-5p 1 0 0
chr7:74063313|74063695 hsa-miR-6847-5p 0 1 0
chr7:74063313|74063695 hsa-miR-6501-5p 1 1 0
chr7:74063313|74063695 hsa-miR-4787-5p 1 0 0
chr7:74063313|74063695 hsa-miR-1306-5p 0 1 0
chr7:74063313|74063695 hsa-miR-7846-3p 0 1 0
chr7:74063313|74063695 hsa-miR-2114-5p 0 1 0
chr7:74063313|74063695 hsa-miR-1911-3p 1 1 0
chr7:74063313|74063695 hsa-miR-4727-3p 0 1 0
chr7:74063313|74063695 hsa-miR-4762-3p 0 1 0
chr7:74063313|74063695 hsa-miR-6752-3p 0 1 0
chr7:74063313|74063695 hsa-miR-4740-3p 1 0 0
chr7:74063313|74063695 hsa-miR-1233-5p 1 1 0
chr7:74063313|74063695 hsa-miR-4763-3p 1 0 0
chr7:74063313|74063695 hsa-miR-6778-5p 1 1 0
chr7:74063313|74063695 hsa-miR-1343-5p 0 1 0
chr7:74063313|74063695 hsa-miR-6726-5p 1 1 0
chr7:74063313|74063695 hsa-miR-6752-5p 1 0 0
chr7:74063313|74063695 hsa-miR-6756-5p 1 0 0
chr7:74063313|74063695 hsa-miR-6803-5p 1 1 0
chr7:74063313|74063695 hsa-miR-6842-5p 1 0 0
chr7:74063313|74063695 hsa-miR-6851-5p 1 1 0
chr7:74063313|74063695 hsa-miR-10401-5p 0 1 0
chr7:74063313|74063695 hsa-miR-1249-5p 1 0 0
chr7:74063313|74063695 hsa-miR-6779-5p 1 1 0
chr7:74063313|74063695 hsa-miR-6797-5p 1 0 0
chr7:74063313|74063695 hsa-miR-3620-5p 1 0 0
chr7:74063313|74063695 hsa-miR-10396a-5p 1 0 0
chr7:74063313|74063695 hsa-miR-1237-5p 1 0 0
chr7:74063313|74063695 hsa-miR-328-5p 1 0 0
chr7:74063313|74063695 hsa-miR-6794-5p 1 0 0
chr7:74063313|74063695 hsa-miR-6795-5p 1 0 0
chr7:74063313|74063695 hsa-miR-6846-5p 1 0 0
chr7:74063313|74063695 hsa-miR-6848-5p 1 1 0
chr7:74063313|74063695 hsa-miR-939-5p 1 1 0
chr7:74063313|74063695 hsa-miR-4758-5p 1 0 0
chr7:74063313|74063695 hsa-miR-4633-3p 1 0 0
chr7:74063313|74063695 hsa-miR-3085-5p 1 1 0
chr7:74063313|74063695 hsa-miR-10396a-3p 1 0 0
chr7:74063313|74063695 hsa-miR-10396b-3p 1 0 0
chr7:74063313|74063695 hsa-miR-3198 1 0 0
chr7:74063313|74063695 hsa-miR-3940-5p 1 0 0
chr7:74063313|74063695 hsa-miR-4472 0 1 0
chr7:74063313|74063695 hsa-miR-6785-5p 1 0 0
chr7:74063313|74063695 hsa-miR-3184-5p 0 1 0
chr7:74063313|74063695 hsa-miR-3689d 0 1 0
chr7:74063313|74063695 hsa-miR-6724-5p 1 0 0
chr7:74063313|74063695 hsa-miR-10400-3p 1 1 0
chr7:74063313|74063695 hsa-miR-6775-3p 1 0 0
chr7:74063313|74063695 hsa-miR-10392-3p 1 0 0
chr7:74063313|74063695 hsa-miR-6764-5p 1 1 0
chr7:74063313|74063695 hsa-miR-412-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:74063313|74063695
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MELQALRLRVLRAQRLPLGLWRQLSIRLRWSERWD
Nucleotide Sequence CTGGAACTCCAAGCCCTCCGACTCCGAGTCCTCCGAGCCCAGCGGCTCCCACTAGGCCTGTGGAGACAGCTGAGCATTAGACTCCGCTGGTCAGAAAGGTGGGACTGA
CircID chr7:74063313|74063695
ORF Type ORF2
Protein Length 61
Nucleotide Length 183
Protein Sequence MAQWSQEVSGAGTLSLQCLVRSSSHTLGAWGPGGSSHLHPVLTKLGGFGSSFGCGSGGGGS
Nucleotide Sequence ATGGCACAGTGGAGCCAGGAGGTGTCTGGGGCAGGGACTCTGAGTCTACAGTGCCTGGTCAGAAGCTCCTCCCACACCCTGGGGGCCTGGGGGCCTGGCGGCAGCTCCCACCTCCACCCAGTGCTCACCAAACTGGGCGGCTTTGGCAGCAGCTTTGGCTGCGGCAGCGGCGGCGGCGGGTCC
CircID chr7:74063313|74063695
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MGTQVEPEVSPGLRWHSGARRCLGQGL
Nucleotide Sequence CTGGGGACACAGGTGGAGCCTGAGGTCTCCCCTGGCCTTCGATGGCACAGTGGAGCCAGGAGGTGTCTGGGGCAGGGACTCTGA
CircID chr7:74063313|74063695
ORF Type ORF4
Protein Length 30
Nucleotide Length 90
Protein Sequence MAAAPTSTQCSPNWAALAAALAAAAAAAGP
Nucleotide Sequence CTGGCGGCAGCTCCCACCTCCACCCAGTGCTCACCAAACTGGGCGGCTTTGGCAGCAGCTTTGGCTGCGGCAGCGGCGGCGGCGGGTCCG
CircID chr7:74063313|74063695
ORF Type ORF5
Protein Length 93
Nucleotide Length 279
Protein Sequence MVRKVGLKPRPVEGGGVLWGHRWSLRSPLAFDGTVEPGGVWGRDSESTVPGQKLLPHPGGLGAWRQLPPPPSAHQTGRLWQQLWLRQRRRRVR
Nucleotide Sequence CTGGTCAGAAAGGTGGGACTGAAGCCTCGGCCTGTGGAGGGCGGAGGTGTCCTCTGGGGACACAGGTGGAGCCTGAGGTCTCCCCTGGCCTTCGATGGCACAGTGGAGCCAGGAGGTGTCTGGGGCAGGGACTCTGAGTCTACAGTGCCTGGTCAGAAGCTCCTCCCACACCCTGGGGGCCTGGGGGCCTGGCGGCAGCTCCCACCTCCACCCAGTGCTCACCAAACTGGGCGGCTTTGGCAGCAGCTTTGGCTGCGGCAGCGGCGGCGGCGGGTCCGG
CircID chr7:74063313|74063695
ORF Type ORF6
Protein Length 121
Nucleotide Length 363
Protein Sequence MPQPKLLPKPPSLVSTGWRWELPPGPQAPRVWEELLTRHCRLRVPAPDTSWLHCAIEGQGRPQAPPVSPEDTSALHRPRLQSHLSDQRSLMLSCLHRPSGSRWARRTRSRRAWSSRCWGPW
Nucleotide Sequence CTGCCGCAGCCAAAGCTGCTGCCAAAGCCGCCCAGTTTGGTGAGCACTGGGTGGAGGTGGGAGCTGCCGCCAGGCCCCCAGGCCCCCAGGGTGTGGGAGGAGCTTCTGACCAGGCACTGTAGACTCAGAGTCCCTGCCCCAGACACCTCCTGGCTCCACTGTGCCATCGAAGGCCAGGGGAGACCTCAGGCTCCACCTGTGTCCCCAGAGGACACCTCCGCCCTCCACAGGCCGAGGCTTCAGTCCCACCTTTCTGACCAGCGGAGTCTAATGCTCAGCTGTCTCCACAGGCCTAGTGGGAGCCGCTGGGCTCGGAGGACTCGGAGTCGGAGGGCTTGGAGTTCCAGGTGTTGGGGGCCTTGG
CircID chr7:74063313|74063695
ORF Type ORF7
Protein Length 45
Nucleotide Length 138
Protein Sequence MPQTPPGSTVPSKARGDLRLHLCPQRTPPPSTGRGFSPTFLTSGV
Nucleotide Sequence CTGCCCCAGACACCTCCTGGCTCCACTGTGCCATCGAAGGCCAGGGGAGACCTCAGGCTCCACCTGTGTCCCCAGAGGACACCTCCGCCCTCCACAGGCCGAGGCTTCAGTCCCACCTTTCTGACCAGCGGAGTCTAA
CircID chr7:74063313|74063695
ORF Type ORF8
Protein Length 35
Nucleotide Length 108
Protein Sequence MAPLCHRRPGETSGSTCVPRGHLRPPQAEASVPPF
Nucleotide Sequence CTGGCTCCACTGTGCCATCGAAGGCCAGGGGAGACCTCAGGCTCCACCTGTGTCCCCAGAGGACACCTCCGCCCTCCACAGGCCGAGGCTTCAGTCCCACCTTTCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab