CircRNA Information

General Information
circRNA Basic Information
CircID chr7:74700309|74705194
Strand +
CircType exon
Host Gene ENSG00000263001.4;
Algorism CIRI2;
Sequence CTGTCAGCATCTGTTACCATCACACGACCACCTACATGCTTCTTTGGCTCTAAAAAAGGTCTGCATTAAAACAAAACAAAACAAAACTTCGTATGAATACGCAAAATTATTGTAAAGCATACATTTAAATGACTTCTGTGTTAAATATGAATTTTAAAAATACATTAACGTAAGCTAAATATTCAAATTTATACGAATCAACTGTTGATGGGTACAAAGGGAGAAAGCACTTCACCTCTTAATGATGAATGAAATCCCTGCTTTGTTCTCCAAAATCCATTTCAGGGTTGCAAGATCATAGTTCTCGGGGTGTTTAAAGGCAACACCTTCCGGAAGCCCCTGCACTACCACAGCCGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:74700309|74705194 hsa-miR-21-5p 0 0 1
chr7:74700309|74705194 hsa-miR-21-3p 0 0 1
chr7:74700309|74705194 hsa-miR-204-5p 0 0 1
chr7:74700309|74705194 hsa-miR-204-3p 0 0 1
chr7:74700309|74705194 hsa-miR-211-5p 0 0 1
chr7:74700309|74705194 hsa-miR-211-3p 0 0 1
chr7:74700309|74705194 hsa-miR-130a-5p 0 0 1
chr7:74700309|74705194 hsa-miR-130a-3p 0 0 1
chr7:74700309|74705194 hsa-miR-146a-5p 0 0 1
chr7:74700309|74705194 hsa-miR-146a-3p 0 0 1
chr7:74700309|74705194 hsa-miR-155-5p 0 0 1
chr7:74700309|74705194 hsa-miR-155-3p 0 0 1
chr7:74700309|74705194 hsa-miR-302a-5p 0 0 1
chr7:74700309|74705194 hsa-miR-302a-3p 0 0 1
chr7:74700309|74705194 hsa-miR-301a-5p 0 0 1
chr7:74700309|74705194 hsa-miR-301a-3p 0 0 1
chr7:74700309|74705194 hsa-miR-130b-5p 0 0 1
chr7:74700309|74705194 hsa-miR-130b-3p 0 0 1
chr7:74700309|74705194 hsa-miR-302b-5p 0 0 1
chr7:74700309|74705194 hsa-miR-302b-3p 0 0 1
chr7:74700309|74705194 hsa-miR-302c-5p 0 0 1
chr7:74700309|74705194 hsa-miR-302c-3p 0 0 1
chr7:74700309|74705194 hsa-miR-302d-5p 0 0 1
chr7:74700309|74705194 hsa-miR-302d-3p 0 0 1
chr7:74700309|74705194 hsa-miR-372-5p 0 0 1
chr7:74700309|74705194 hsa-miR-372-3p 0 0 1
chr7:74700309|74705194 hsa-miR-373-5p 0 0 1
chr7:74700309|74705194 hsa-miR-373-3p 0 0 1
chr7:74700309|74705194 hsa-miR-520e-5p 0 0 1
chr7:74700309|74705194 hsa-miR-520e-3p 0 0 1
chr7:74700309|74705194 hsa-miR-520f-5p 0 0 1
chr7:74700309|74705194 hsa-miR-520f-3p 0 0 1
chr7:74700309|74705194 hsa-miR-520b-5p 0 0 1
chr7:74700309|74705194 hsa-miR-520b-3p 0 0 1
chr7:74700309|74705194 hsa-miR-569 0 0 1
chr7:74700309|74705194 hsa-miR-573 0 0 1
chr7:74700309|74705194 hsa-miR-620 0 0 1
chr7:74700309|74705194 hsa-miR-660-5p 0 0 1
chr7:74700309|74705194 hsa-miR-660-3p 0 0 1
chr7:74700309|74705194 hsa-miR-421 0 0 1
chr7:74700309|74705194 hsa-miR-454-5p 0 0 1
chr7:74700309|74705194 hsa-miR-454-3p 0 0 1
chr7:74700309|74705194 hsa-miR-1298-5p 0 0 1
chr7:74700309|74705194 hsa-miR-1298-3p 0 0 1
chr7:74700309|74705194 hsa-miR-301b-5p 0 0 1
chr7:74700309|74705194 hsa-miR-301b-3p 0 0 1
chr7:74700309|74705194 hsa-miR-1290 0 1 1
chr7:74700309|74705194 hsa-miR-1303 0 0 1
chr7:74700309|74705194 hsa-miR-1246 0 1 1
chr7:74700309|74705194 hsa-miR-1270 0 0 1
chr7:74700309|74705194 hsa-miR-302e 0 0 1
chr7:74700309|74705194 hsa-miR-1279 0 0 1
chr7:74700309|74705194 hsa-miR-330-3p 0 0 1
chr7:74700309|74705194 hsa-miR-338-5p 0 0 1
chr7:74700309|74705194 hsa-miR-628-5p 0 0 1
chr7:74700309|74705194 hsa-miR-485-3p 0 0 1
chr7:74700309|74705194 hsa-miR-520d-3p 0 1 1
chr7:74700309|74705194 hsa-miR-146b-5p 0 0 1
chr7:74700309|74705194 hsa-miR-513a-3p 0 0 1
chr7:74700309|74705194 hsa-miR-876-5p 0 0 1
chr7:74700309|74705194 hsa-miR-520a-3p 0 1 1
chr7:74700309|74705194 hsa-miR-520c-3p 0 0 1
chr7:74700309|74705194 hsa-miR-590-5p 0 0 1
chr7:74700309|74705194 hsa-miR-590-3p 0 0 1
chr7:74700309|74705194 hsa-miR-323-5p 0 0 1
chr7:74700309|74705194 hsa-miR-664 0 0 1
chr7:74700309|74705194 hsa-miR-768-5p 0 0 1
chr7:74700309|74705194 hsa-miR-203 0 0 1
chr7:74700309|74705194 hsa-miR-450a 0 0 1
chr7:74700309|74705194 hsa-miR-194 0 0 1
chr7:74700309|74705194 hsa-miR-608 1 0 0
chr7:74700309|74705194 hsa-miR-760 1 0 0
chr7:74700309|74705194 hsa-miR-1293 1 0 0
chr7:74700309|74705194 hsa-miR-4706 1 0 0
chr7:74700309|74705194 hsa-miR-4741 1 0 0
chr7:74700309|74705194 hsa-miR-4754 1 0 0
chr7:74700309|74705194 hsa-miR-5787 1 0 0
chr7:74700309|74705194 hsa-miR-9718 1 0 0
chr7:74700309|74705194 hsa-miR-12114 1 0 0
chr7:74700309|74705194 hsa-miR-181a-3p 0 1 0
chr7:74700309|74705194 hsa-miR-504-3p 1 0 0
chr7:74700309|74705194 hsa-miR-4687-3p 1 0 0
chr7:74700309|74705194 hsa-miR-7114-5p 1 0 0
chr7:74700309|74705194 hsa-miR-505-5p 1 0 0
chr7:74700309|74705194 hsa-miR-6759-5p 1 0 0
chr7:74700309|74705194 hsa-miR-6721-5p 1 0 0
chr7:74700309|74705194 hsa-miR-6827-5p 1 0 0
chr7:74700309|74705194 hsa-miR-345-3p 0 1 0
chr7:74700309|74705194 hsa-miR-6784-5p 1 0 0
chr7:74700309|74705194 hsa-miR-4732-5p 1 0 0
chr7:74700309|74705194 hsa-miR-6789-5p 1 0 0
chr7:74700309|74705194 hsa-miR-6867-3p 0 1 0
chr7:74700309|74705194 hsa-miR-629-3p 0 1 0
chr7:74700309|74705194 hsa-miR-5587-3p 0 1 0
chr7:74700309|74705194 hsa-miR-1244 0 1 0
chr7:74700309|74705194 hsa-miR-4423-5p 0 1 0
chr7:74700309|74705194 hsa-miR-4763-3p 1 0 0
chr7:74700309|74705194 hsa-miR-6743-5p 1 0 0
chr7:74700309|74705194 hsa-miR-6803-5p 1 0 0
chr7:74700309|74705194 hsa-miR-6722-3p 1 1 0
chr7:74700309|74705194 hsa-miR-4685-3p 0 1 0
chr7:74700309|74705194 hsa-miR-1909-3p 1 0 0
chr7:74700309|74705194 hsa-miR-6848-5p 1 0 0
chr7:74700309|74705194 hsa-miR-6511b-5p 1 0 0
chr7:74700309|74705194 hsa-miR-4781-5p 0 1 0
chr7:74700309|74705194 hsa-miR-498-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr7:74700309|74705194
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MLPSHDHLHASLALKKVCIKTKQNKTSYEYAKLL
Nucleotide Sequence CTGTTACCATCACACGACCACCTACATGCTTCTTTGGCTCTAAAAAAGGTCTGCATTAAAACAAAACAAAACAAAACTTCGTATGAATACGCAAAATTATTGTAA
CircID chr7:74700309|74705194
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence MLYNNFAYSYEVLFCFVLMQTFFRAKEACRWSCDGNRC
Nucleotide Sequence ATGCTTTACAATAATTTTGCGTATTCATACGAAGTTTTGTTTTGTTTTGTTTTAATGCAGACCTTTTTTAGAGCCAAAGAAGCATGTAGGTGGTCGTGTGATGGTAACAGATGCTGA
CircID chr7:74700309|74705194
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MYPSTVDSYKFEYLAYVNVFLKFIFNTEVI
Nucleotide Sequence TTGTACCCATCAACAGTTGATTCGTATAAATTTGAATATTTAGCTTACGTTAATGTATTTTTAAAATTCATATTTAACACAGAAGTCATTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab