CircRNA Information

General Information
circRNA Basic Information
CircID chr7:75888024|75888132
Strand -
CircType exon
Host Gene ENSG00000005486.15;
Algorism CIRI2;
Sequence AGAGCTGCCACCCTCACCTGTCCCCAAGCCACCCTGTGTCCCAGACGCAGCACGCCAGTGGTCAGAAGCTGGCCTCCTGGCCCTCCTGCACCCCCGGGCACATGCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:75888024|75888132 hsa-miR-552-5p 0 0 1
chr7:75888024|75888132 hsa-miR-552-3p 0 0 1
chr7:75888024|75888132 hsa-miR-665 0 1 1
chr7:75888024|75888132 hsa-miR-1286 0 0 1
chr7:75888024|75888132 hsa-miR-125a-3p 0 1 1
chr7:75888024|75888132 hsa-miR-885-3p 0 0 1
chr7:75888024|75888132 hsa-miR-455-5p 0 0 1
chr7:75888024|75888132 hsa-miR-342-5p 0 0 1
chr7:75888024|75888132 hsa-miR-1302 0 0 1
chr7:75888024|75888132 hsa-miR-220c 0 0 1
chr7:75888024|75888132 hsa-miR-608 1 1 0
chr7:75888024|75888132 hsa-miR-637 1 0 0
chr7:75888024|75888132 hsa-miR-1293 1 0 0
chr7:75888024|75888132 hsa-miR-1268a 1 0 0
chr7:75888024|75888132 hsa-miR-2110 1 0 0
chr7:75888024|75888132 hsa-miR-3122 1 0 0
chr7:75888024|75888132 hsa-miR-3138 1 0 0
chr7:75888024|75888132 hsa-miR-3175 1 0 0
chr7:75888024|75888132 hsa-miR-3196 1 0 0
chr7:75888024|75888132 hsa-miR-4298 1 1 0
chr7:75888024|75888132 hsa-miR-4314 1 1 0
chr7:75888024|75888132 hsa-miR-4253 1 1 0
chr7:75888024|75888132 hsa-miR-3945 1 0 0
chr7:75888024|75888132 hsa-miR-1268b 1 0 0
chr7:75888024|75888132 hsa-miR-4462 1 1 0
chr7:75888024|75888132 hsa-miR-4466 1 0 0
chr7:75888024|75888132 hsa-miR-4507 1 0 0
chr7:75888024|75888132 hsa-miR-4651 1 0 0
chr7:75888024|75888132 hsa-miR-4669 1 1 0
chr7:75888024|75888132 hsa-miR-4688 1 0 0
chr7:75888024|75888132 hsa-miR-4710 0 1 0
chr7:75888024|75888132 hsa-miR-4748 1 0 0
chr7:75888024|75888132 hsa-miR-5090 1 0 0
chr7:75888024|75888132 hsa-miR-5572 1 0 0
chr7:75888024|75888132 hsa-miR-5787 1 0 0
chr7:75888024|75888132 hsa-miR-6165 1 0 0
chr7:75888024|75888132 hsa-miR-6745 1 0 0
chr7:75888024|75888132 hsa-miR-8089 1 1 0
chr7:75888024|75888132 hsa-miR-12126 1 0 0
chr7:75888024|75888132 hsa-miR-211-3p 1 0 0
chr7:75888024|75888132 hsa-miR-4731-5p 1 0 0
chr7:75888024|75888132 hsa-miR-3150a-3p 1 0 0
chr7:75888024|75888132 hsa-miR-6825-5p 1 0 0
chr7:75888024|75888132 hsa-miR-6857-5p 1 0 0
chr7:75888024|75888132 hsa-miR-6804-5p 0 1 0
chr7:75888024|75888132 hsa-miR-1227-5p 1 0 0
chr7:75888024|75888132 hsa-miR-6089 1 0 0
chr7:75888024|75888132 hsa-miR-6880-5p 1 0 0
chr7:75888024|75888132 hsa-miR-4722-5p 1 1 0
chr7:75888024|75888132 hsa-miR-6730-5p 1 0 0
chr7:75888024|75888132 hsa-miR-6727-5p 1 0 0
chr7:75888024|75888132 hsa-miR-3622b-5p 1 0 0
chr7:75888024|75888132 hsa-miR-7845-5p 1 1 0
chr7:75888024|75888132 hsa-miR-3151-5p 1 0 0
chr7:75888024|75888132 hsa-miR-1292-5p 1 0 0
chr7:75888024|75888132 hsa-miR-6772-5p 1 0 0
chr7:75888024|75888132 hsa-miR-6732-5p 1 0 0
chr7:75888024|75888132 hsa-miR-6782-5p 1 0 0
chr7:75888024|75888132 hsa-miR-6810-5p 1 1 0
chr7:75888024|75888132 hsa-miR-5008-5p 1 0 0
chr7:75888024|75888132 hsa-miR-7109-5p 1 0 0
chr7:75888024|75888132 hsa-miR-6740-5p 1 1 0
chr7:75888024|75888132 hsa-miR-204-3p 1 0 0
chr7:75888024|75888132 hsa-miR-1229-5p 1 0 0
chr7:75888024|75888132 hsa-miR-4640-5p 1 1 0
chr7:75888024|75888132 hsa-miR-6771-5p 1 0 0
chr7:75888024|75888132 hsa-miR-92b-5p 1 0 0
chr7:75888024|75888132 hsa-miR-4787-5p 0 1 0
chr7:75888024|75888132 hsa-miR-149-3p 1 0 0
chr7:75888024|75888132 hsa-miR-550b-2-5p 0 1 0
chr7:75888024|75888132 hsa-miR-7850-5p 1 0 0
chr7:75888024|75888132 hsa-miR-7112-5p 1 0 0
chr7:75888024|75888132 hsa-miR-6895-5p 0 1 0
chr7:75888024|75888132 hsa-miR-3191-3p 1 0 0
chr7:75888024|75888132 hsa-miR-1225-5p 1 0 0
chr7:75888024|75888132 hsa-miR-4763-3p 1 0 0
chr7:75888024|75888132 hsa-miR-6893-5p 1 0 0
chr7:75888024|75888132 hsa-miR-6743-5p 1 0 0
chr7:75888024|75888132 hsa-miR-6752-5p 1 1 0
chr7:75888024|75888132 hsa-miR-6754-5p 1 0 0
chr7:75888024|75888132 hsa-miR-6756-5p 1 0 0
chr7:75888024|75888132 hsa-miR-6803-5p 1 1 0
chr7:75888024|75888132 hsa-miR-7110-5p 0 1 0
chr7:75888024|75888132 hsa-miR-10401-5p 1 0 0
chr7:75888024|75888132 hsa-miR-6722-3p 1 0 0
chr7:75888024|75888132 hsa-miR-6763-5p 1 0 0
chr7:75888024|75888132 hsa-miR-6808-5p 1 0 0
chr7:75888024|75888132 hsa-miR-6879-5p 1 0 0
chr7:75888024|75888132 hsa-miR-7111-5p 1 0 0
chr7:75888024|75888132 hsa-miR-4728-5p 1 0 0
chr7:75888024|75888132 hsa-miR-5196-5p 1 0 0
chr7:75888024|75888132 hsa-miR-642b-3p 1 0 0
chr7:75888024|75888132 hsa-miR-6780b-5p 1 0 0
chr7:75888024|75888132 hsa-miR-328-5p 1 0 0
chr7:75888024|75888132 hsa-miR-4725-3p 1 0 0
chr7:75888024|75888132 hsa-miR-4726-5p 0 1 0
chr7:75888024|75888132 hsa-miR-675-5p 1 1 0
chr7:75888024|75888132 hsa-miR-6846-5p 1 0 0
chr7:75888024|75888132 hsa-miR-6848-5p 1 0 0
chr7:75888024|75888132 hsa-miR-4436b-3p 1 0 0
chr7:75888024|75888132 hsa-miR-4697-5p 1 0 0
chr7:75888024|75888132 hsa-miR-3940-5p 1 0 0
chr7:75888024|75888132 hsa-miR-4665-5p 1 0 0
chr7:75888024|75888132 hsa-miR-7151-3p 1 0 0
chr7:75888024|75888132 hsa-miR-4646-5p 1 0 0
chr7:75888024|75888132 hsa-miR-550a-5p 0 1 0
chr7:75888024|75888132 hsa-miR-619-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:75888024|75888132
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MCPRRSTPVVRSWPPGPPAPPGTCP
Nucleotide Sequence CTGTGTCCCAGACGCAGCACGCCAGTGGTCAGAAGCTGGCCTCCTGGCCCTCCTGCACCCCCGGGCACATGCCCA
CircID chr7:75888024|75888132
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MPPSPVPKPPCVPDAARQWSEAGLLALLHPRAHAH
Nucleotide Sequence CTGCCACCCTCACCTGTCCCCAAGCCACCCTGTGTCCCAGACGCAGCACGCCAGTGGTCAGAAGCTGGCCTCCTGGCCCTCCTGCACCCCCGGGCACATGCCCAC
CircID chr7:75888024|75888132
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MSPSHPVSQTQHASGQKLASWPSCTPGHMP
Nucleotide Sequence CTGTCCCCAAGCCACCCTGTGTCCCAGACGCAGCACGCCAGTGGTCAGAAGCTGGCCTCCTGGCCCTCCTGCACCCCCGGGCACATGCCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab