CircRNA Information

General Information
circRNA Basic Information
CircID chr7:77626755|77626891
Strand -
CircType exon
Host Gene ENSG00000127947.14;
Algorism CIRI2;
Sequence CTCATCCAGTGCCACCCATCTTGACACCTTCTCCCCCTTCAGCTTTTCCAACAGTCACTACTGTGTGGCAGGACAATGATAGATACCATCCAAAGCCAGTGTTGCATATGGTTTCATCAGAACAACATTCAGCAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:77626755|77626891 hsa-miR-141-5p 0 0 1
chr7:77626755|77626891 hsa-miR-141-3p 0 0 1
chr7:77626755|77626891 hsa-miR-134-5p 0 0 1
chr7:77626755|77626891 hsa-miR-134-3p 0 0 1
chr7:77626755|77626891 hsa-miR-320a-5p 0 0 1
chr7:77626755|77626891 hsa-miR-320a-3p 0 0 1
chr7:77626755|77626891 hsa-miR-200a-5p 0 0 1
chr7:77626755|77626891 hsa-miR-200a-3p 0 0 1
chr7:77626755|77626891 hsa-miR-892b 0 0 1
chr7:77626755|77626891 hsa-miR-943 0 0 1
chr7:77626755|77626891 hsa-miR-1293 0 0 1
chr7:77626755|77626891 hsa-miR-1243 0 0 1
chr7:77626755|77626891 hsa-miR-1255a 0 0 1
chr7:77626755|77626891 hsa-miR-409-3p 0 1 1
chr7:77626755|77626891 hsa-miR-199b-3p 0 0 1
chr7:77626755|77626891 hsa-miR-199a-3p 0 0 1
chr7:77626755|77626891 hsa-miR-320b 1 1 1
chr7:77626755|77626891 hsa-miR-320c 1 1 1
chr7:77626755|77626891 hsa-miR-320d 0 1 1
chr7:77626755|77626891 hsa-miR-1255b 0 0 1
chr7:77626755|77626891 hsa-miR-765 1 0 0
chr7:77626755|77626891 hsa-miR-1183 1 0 0
chr7:77626755|77626891 hsa-miR-1275 1 0 0
chr7:77626755|77626891 hsa-miR-3147 1 0 0
chr7:77626755|77626891 hsa-miR-3153 1 0 0
chr7:77626755|77626891 hsa-miR-3154 1 0 0
chr7:77626755|77626891 hsa-miR-4298 1 0 0
chr7:77626755|77626891 hsa-miR-4271 1 0 0
chr7:77626755|77626891 hsa-miR-3936 1 0 0
chr7:77626755|77626891 hsa-miR-4429 0 1 0
chr7:77626755|77626891 hsa-miR-4451 1 0 0
chr7:77626755|77626891 hsa-miR-3135b 1 0 0
chr7:77626755|77626891 hsa-miR-4510 1 0 0
chr7:77626755|77626891 hsa-miR-4516 1 1 0
chr7:77626755|77626891 hsa-miR-4525 1 0 0
chr7:77626755|77626891 hsa-miR-4706 1 0 0
chr7:77626755|77626891 hsa-miR-4739 1 0 0
chr7:77626755|77626891 hsa-miR-5190 1 0 0
chr7:77626755|77626891 hsa-miR-5698 1 0 0
chr7:77626755|77626891 hsa-miR-5703 1 0 0
chr7:77626755|77626891 hsa-miR-6077 1 0 0
chr7:77626755|77626891 hsa-miR-6088 1 0 0
chr7:77626755|77626891 hsa-miR-6124 1 1 0
chr7:77626755|77626891 hsa-miR-6127 1 0 0
chr7:77626755|77626891 hsa-miR-6133 1 0 0
chr7:77626755|77626891 hsa-miR-7515 1 0 0
chr7:77626755|77626891 hsa-miR-8075 1 0 0
chr7:77626755|77626891 hsa-miR-8077 1 1 0
chr7:77626755|77626891 hsa-miR-8085 1 0 0
chr7:77626755|77626891 hsa-miR-12119 1 0 0
chr7:77626755|77626891 hsa-miR-6734-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6765-5p 1 0 0
chr7:77626755|77626891 hsa-miR-3150a-3p 1 0 0
chr7:77626755|77626891 hsa-miR-7106-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6825-5p 1 0 0
chr7:77626755|77626891 hsa-miR-4687-3p 1 0 0
chr7:77626755|77626891 hsa-miR-6804-5p 1 0 0
chr7:77626755|77626891 hsa-miR-139-3p 1 0 0
chr7:77626755|77626891 hsa-miR-5187-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6515-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6746-5p 1 0 0
chr7:77626755|77626891 hsa-miR-4653-3p 1 0 0
chr7:77626755|77626891 hsa-miR-6730-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6732-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6798-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6760-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6881-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6782-5p 1 0 0
chr7:77626755|77626891 hsa-miR-3156-5p 1 0 0
chr7:77626755|77626891 hsa-miR-7109-5p 1 0 0
chr7:77626755|77626891 hsa-miR-30c-2-3p 1 0 0
chr7:77626755|77626891 hsa-miR-6757-3p 0 1 0
chr7:77626755|77626891 hsa-miR-7850-5p 1 0 0
chr7:77626755|77626891 hsa-miR-423-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6787-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6870-5p 1 1 0
chr7:77626755|77626891 hsa-miR-1343-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6743-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6815-5p 0 1 0
chr7:77626755|77626891 hsa-miR-11181-3p 1 0 0
chr7:77626755|77626891 hsa-miR-1249-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6788-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6797-5p 1 0 0
chr7:77626755|77626891 hsa-miR-7111-5p 1 1 0
chr7:77626755|77626891 hsa-miR-4728-5p 1 0 0
chr7:77626755|77626891 hsa-miR-5196-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6780b-5p 1 0 0
chr7:77626755|77626891 hsa-miR-10526-3p 1 0 0
chr7:77626755|77626891 hsa-miR-328-5p 1 0 0
chr7:77626755|77626891 hsa-miR-4725-3p 1 1 0
chr7:77626755|77626891 hsa-miR-6738-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6794-5p 1 1 0
chr7:77626755|77626891 hsa-miR-6795-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6858-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6887-5p 1 0 0
chr7:77626755|77626891 hsa-miR-4723-5p 0 1 0
chr7:77626755|77626891 hsa-miR-939-5p 1 0 0
chr7:77626755|77626891 hsa-miR-4758-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6511a-5p 1 0 0
chr7:77626755|77626891 hsa-miR-6731-5p 1 0 0
chr7:77626755|77626891 hsa-miR-1914-3p 1 0 0
chr7:77626755|77626891 hsa-miR-4716-3p 1 0 0
chr7:77626755|77626891 hsa-miR-3129-5p 0 1 0
chr7:77626755|77626891 hsa-miR-514b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:77626755|77626891
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MCGRTMIDTIQSQCCIWFHQNNIQQ
Nucleotide Sequence CTGTGTGGCAGGACAATGATAGATACCATCCAAAGCCAGTGTTGCATATGGTTTCATCAGAACAACATTCAGCAG
CircID chr7:77626755|77626891
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MTPSPPSAFPTVTTVWQDNDRYHPKPVLHMVSSEQHSAD
Nucleotide Sequence TTGACACCTTCTCCCCCTTCAGCTTTTCCAACAGTCACTACTGTGTGGCAGGACAATGATAGATACCATCCAAAGCCAGTGTTGCATATGGTTTCATCAGAACAACATTCAGCAGAC
CircID chr7:77626755|77626891
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence LLNVVLMKPYATLALDGIYHCPATQ
Nucleotide Sequence CTGCTGAATGTTGTTCTGATGAAACCATATGCAACACTGGCTTTGGATGGTATCTATCATTGTCCTGCCACACAGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab