CircRNA Information

General Information
circRNA Basic Information
CircID chr7:898749|898925
Strand +
CircType exon
Host Gene ENSG00000105963.12;
Algorism CIRI2;
Sequence CTTAGCGAGTGCGGCTGGAGGACCACGGACATTGGACTCACTGTGGCTGGACGGAGGGGACCCGTGGATGGGGGGGCTCTGGCGTCCTGAGGCCACCTGGCCCCACCTGCTCCTCAGGGCAGCCCGGCGCGGCCAGGTAGGGCCCGAGCTTCAGCTTCCAGGATGCTTCTCTGGAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:898749|898925 hsa-miR-619-5p 0 0 1
chr7:898749|898925 hsa-miR-619-3p 0 0 1
chr7:898749|898925 hsa-miR-766-5p 0 0 1
chr7:898749|898925 hsa-miR-766-3p 0 0 1
chr7:898749|898925 hsa-miR-874-5p 0 0 1
chr7:898749|898925 hsa-miR-874-3p 0 0 1
chr7:898749|898925 hsa-miR-127-5p 0 1 1
chr7:898749|898925 hsa-miR-671-5p 0 0 1
chr7:898749|898925 hsa-miR-1225-3p 1 0 1
chr7:898749|898925 hsa-miR-146b-3p 0 0 1
chr7:898749|898925 hsa-miR-525-5p 0 0 1
chr7:898749|898925 hsa-miR-520a-5p 0 0 1
chr7:898749|898925 hsa-miR-125a-5p 0 0 1
chr7:898749|898925 hsa-miR-128 0 0 1
chr7:898749|898925 hsa-miR-125b 0 0 1
chr7:898749|898925 hsa-miR-133b 1 0 0
chr7:898749|898925 hsa-miR-762 1 0 0
chr7:898749|898925 hsa-miR-1470 0 1 0
chr7:898749|898925 hsa-miR-3181 1 1 0
chr7:898749|898925 hsa-miR-3195 1 1 0
chr7:898749|898925 hsa-miR-3665 0 1 0
chr7:898749|898925 hsa-miR-3907 1 0 0
chr7:898749|898925 hsa-miR-4656 1 0 0
chr7:898749|898925 hsa-miR-4689 0 1 0
chr7:898749|898925 hsa-miR-4741 1 1 0
chr7:898749|898925 hsa-miR-6069 1 0 0
chr7:898749|898925 hsa-miR-6081 1 1 0
chr7:898749|898925 hsa-miR-9899 1 0 0
chr7:898749|898925 hsa-miR-128-3p 0 1 0
chr7:898749|898925 hsa-miR-139-5p 1 0 0
chr7:898749|898925 hsa-miR-92a-2-5p 0 1 0
chr7:898749|898925 hsa-miR-323a-5p 1 0 0
chr7:898749|898925 hsa-miR-6822-3p 0 1 0
chr7:898749|898925 hsa-miR-6720-5p 1 1 0
chr7:898749|898925 hsa-miR-1227-5p 0 1 0
chr7:898749|898925 hsa-miR-7160-5p 1 1 0
chr7:898749|898925 hsa-miR-6849-3p 1 0 0
chr7:898749|898925 hsa-miR-3151-5p 0 1 0
chr7:898749|898925 hsa-miR-6829-5p 1 1 0
chr7:898749|898925 hsa-miR-3944-3p 1 1 0
chr7:898749|898925 hsa-miR-4640-5p 0 1 0
chr7:898749|898925 hsa-miR-4691-3p 0 1 0
chr7:898749|898925 hsa-miR-2276-5p 1 0 0
chr7:898749|898925 hsa-miR-3605-3p 1 0 0
chr7:898749|898925 hsa-miR-4749-3p 1 0 0
chr7:898749|898925 hsa-miR-1287-3p 0 1 0
chr7:898749|898925 hsa-miR-3162-3p 0 1 0
chr7:898749|898925 hsa-miR-133a-3p 1 0 0
chr7:898749|898925 hsa-miR-99a-3p 0 1 0
chr7:898749|898925 hsa-miR-6743-5p 1 1 0
chr7:898749|898925 hsa-miR-6756-5p 0 1 0
chr7:898749|898925 hsa-miR-6815-5p 0 1 0
chr7:898749|898925 hsa-miR-6763-5p 0 1 0
chr7:898749|898925 hsa-miR-3620-5p 1 0 0
chr7:898749|898925 hsa-miR-328-5p 0 1 0
chr7:898749|898925 hsa-miR-4726-5p 0 1 0
chr7:898749|898925 hsa-miR-6858-5p 0 1 0
chr7:898749|898925 hsa-miR-939-5p 1 0 0
chr7:898749|898925 hsa-miR-10394-3p 1 0 0
chr7:898749|898925 hsa-miR-4667-5p 0 1 0
chr7:898749|898925 hsa-miR-6724-5p 1 0 0
chr7:898749|898925 hsa-miR-6762-5p 0 1 0
chr7:898749|898925 hsa-miR-6756-3p 1 0 0
chr7:898749|898925 hsa-miR-6792-3p 0 1 0
chr7:898749|898925 hsa-miR-10401-3p 1 0 0
chr7:898749|898925 hsa-miR-6829-3p 1 0 0
chr7:898749|898925 hsa-miR-3928-5p 0 1 0
chr7:898749|898925 hsa-miR-6512-3p 0 1 0
chr7:898749|898925 hsa-miR-6823-3p 1 0 0
chr7:898749|898925 hsa-miR-4691-5p 1 1 0
chr7:898749|898925 hsa-miR-99b-3p 0 1 0
chr7:898749|898925 hsa-miR-6806-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr7:898749|898925
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MAPPAPQGSPARPGRARASASRMLLWN
Nucleotide Sequence CTGGCCCCACCTGCTCCTCAGGGCAGCCCGGCGCGGCCAGGTAGGGCCCGAGCTTCAGCTTCCAGGATGCTTCTCTGGAAC

CircID chr7:898749|898925
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MDSLWLDGGDPWMGGLWRPEATWPHLLLRAARRGQVGPELQLPGCFSG
Nucleotide Sequence TTGGACTCACTGTGGCTGGACGGAGGGGACCCGTGGATGGGGGGGCTCTGGCGTCCTGAGGCCACCTGGCCCCACCTGCTCCTCAGGGCAGCCCGGCGCGGCCAGGTAGGGCCCGAGCTTCAGCTTCCAGGATGCTTCTCTGGA

CircID chr7:898749|898925
ORF Type ORF3
Protein Length 41
Nucleotide Length 126
Protein Sequence MEDHGHWTHCGWTEGTRGWGGSGVLRPPGPTCSSGQPGAAR
Nucleotide Sequence CTGGAGGACCACGGACATTGGACTCACTGTGGCTGGACGGAGGGGACCCGTGGATGGGGGGGCTCTGGCGTCCTGAGGCCACCTGGCCCCACCTGCTCCTCAGGGCAGCCCGGCGCGGCCAGGTAG

CircID chr7:898749|898925
ORF Type ORF4
Protein Length 39
Nucleotide Length 117
Protein Sequence MRSRWGQVASGRQSPPIHGSPPSSHSESNVRGPPAALAK
Nucleotide Sequence CTGAGGAGCAGGTGGGGCCAGGTGGCCTCAGGACGCCAGAGCCCCCCCATCCACGGGTCCCCTCCGTCCAGCCACAGTGAGTCCAATGTCCGTGGTCCTCCAGCCGCACTCGCTAAG

CircID chr7:898749|898925
ORF Type ORF5
Protein Length 38
Nucleotide Length 117
Protein Sequence MKLGPYLAAPGCPEEQVGPGGLRTPEPPHPRVPSVQPQ
Nucleotide Sequence CTGAAGCTCGGGCCCTACCTGGCCGCGCCGGGCTGCCCTGAGGAGCAGGTGGGGCCAGGTGGCCTCAGGACGCCAGAGCCCCCCCATCCACGGGTCCCCTCCGTCCAGCCACAGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites