CircNet

General Information

circRNA Basic Information

CircID	chr7:899088\|899245
Strand	-
CircType	exon
Host Gene	ENSG00000105963.12;
Algorism	CIRI2;
Sequence	CCACTCCCTCTGGTCGGACTCCGTCTCGCAGGCAAACAGAAACTTGCGGTCGGGCGTGACGATGGTGATGCCATGTGGCCAGTGGTGGCCCTGGGTGGACGGCGGGAACCCATGCAGCACCGTGTAGCCACTCTCCTTGCTGCCAATGAAGACTTCCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr7:899088\|899245	hsa-miR-193b-5p	0	0	1
chr7:899088\|899245	hsa-miR-193b-3p	0	0	1
chr7:899088\|899245	hsa-miR-588	0	1	1
chr7:899088\|899245	hsa-miR-602	1	0	1
chr7:899088\|899245	hsa-miR-1264	0	0	1
chr7:899088\|899245	hsa-miR-1250-5p	0	0	1
chr7:899088\|899245	hsa-miR-1250-3p	0	0	1
chr7:899088\|899245	hsa-miR-885-3p	1	1	1
chr7:899088\|899245	hsa-miR-1289	0	0	1
chr7:899088\|899245	hsa-miR-193a-3p	0	1	1
chr7:899088\|899245	hsa-miR-1308	0	0	1
chr7:899088\|899245	hsa-miR-3621	1	0	0
chr7:899088\|899245	hsa-miR-3918	0	1	0
chr7:899088\|899245	hsa-miR-4428	0	1	0
chr7:899088\|899245	hsa-miR-5192	0	1	0
chr7:899088\|899245	hsa-miR-6127	0	1	0
chr7:899088\|899245	hsa-miR-6130	0	1	0
chr7:899088\|899245	hsa-miR-4726-3p	1	0	0
chr7:899088\|899245	hsa-miR-23b-5p	0	1	0
chr7:899088\|899245	hsa-miR-221-3p	1	1	0
chr7:899088\|899245	hsa-miR-4693-3p	0	1	0
chr7:899088\|899245	hsa-miR-4746-3p	1	0	0
chr7:899088\|899245	hsa-miR-1343-5p	1	0	0
chr7:899088\|899245	hsa-miR-1915-3p	0	1	0
chr7:899088\|899245	hsa-miR-4685-5p	0	1	0
chr7:899088\|899245	hsa-miR-10401-3p	1	0	0
chr7:899088\|899245	hsa-miR-6837-5p	0	1	0
chr7:899088\|899245	hsa-miR-3619-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr7:899088\|899245
ORF Type	ORF1
Protein Length	49
Nucleotide Length	147
Protein Sequence	MVGLRLAGKQKLAVGRDDGDAMWPVVALGGRREPMQHRVATLLAANEDF
Nucleotide Sequence	CTGGTCGGACTCCGTCTCGCAGGCAAACAGAAACTTGCGGTCGGGCGTGACGATGGTGATGCCATGTGGCCAGTGGTGGCCCTGGGTGGACGGCGGGAACCCATGCAGCACCGTGTAGCCACTCTCCTTGCTGCCAATGAAGACTTC

CircID	chr7:899088\|899245
ORF Type	ORF2
Protein Length	27
Nucleotide Length	84
Protein Sequence	MRSGVTMVMPCGQWWPWVDGGNPCSTV
Nucleotide Sequence	TTGCGGTCGGGCGTGACGATGGTGATGCCATGTGGCCAGTGGTGGCCCTGGGTGGACGGCGGGAACCCATGCAGCACCGTGTAG

CircID	chr7:899088\|899245
ORF Type	ORF3
Protein Length	48
Nucleotide Length	144
Protein Sequence	MAARRVATRCCMGSRRPPRATTGHMASPSSRPTASFCLPARRSPTRGS
Nucleotide Sequence	TTGGCAGCAAGGAGAGTGGCTACACGGTGCTGCATGGGTTCCCGCCGTCCACCCAGGGCCACCACTGGCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTTCTGTTTGCCTGCGAGACGGAGTCCGACCAGAGGGAGT

CircID	chr7:899088\|899245
ORF Type	ORF4
Protein Length	27
Nucleotide Length	81
Protein Sequence	MATWHHHRHARPQVSVCLRDGVRPEGV
Nucleotide Sequence	CTGGCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTTCTGTTTGCCTGCGAGACGGAGTCCGACCAGAGGGAGTG

CircID	chr7:899088\|899245
ORF Type	ORF5
Protein Length	39
Nucleotide Length	117
Protein Sequence	MHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREW
Nucleotide Sequence	CTGCATGGGTTCCCGCCGTCCACCCAGGGCCACCACTGGCCACATGGCATCACCATCGTCACGCCCGACCGCAAGTTTCTGTTTGCCTGCGAGACGGAGTCCGACCAGAGGGAGTGG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information