CircRNA Information

General Information
circRNA Basic Information
CircID chr7:91265988|91266320
Strand -
CircType exon
Host Gene ENSG00000157240.3;
Algorism CIRI2;
Sequence ATCGCCGGCTTCCTCCTGGAAGACCGAGTGGTGTGTAATGACAAGTTCGCCGAGGACGGGGCACGCACTGTGGCGCAGGGCACCAAGAAGGAGGGCTGCACCATCCTCTTCATGATGCTCTACTTCTTCAGCATGGCCAGCTCCATCTGGTGGGTGATCCTGTCGCTCACCTGGTTCCTGGCGGCTGGCATGAAGTGGGGCCACGAGGCCATCGAAGCCAACTCACAGTATTTTCACCTGGCCGCCTGGGCTGTGCCGGCCATCAAGACCATCACCATCCTGGCGCTGGGCCAGGTGGACGGCGATGTGCTGAGCGGAGTGTGCTTCGTGGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:91265988|91266320 hsa-miR-200b-5p 0 0 1
chr7:91265988|91266320 hsa-miR-200b-3p 0 0 1
chr7:91265988|91266320 hsa-miR-200c-5p 0 0 1
chr7:91265988|91266320 hsa-miR-200c-3p 0 0 1
chr7:91265988|91266320 hsa-miR-429 0 0 1
chr7:91265988|91266320 hsa-miR-571 0 1 1
chr7:91265988|91266320 hsa-miR-572 0 1 1
chr7:91265988|91266320 hsa-miR-603 0 0 1
chr7:91265988|91266320 hsa-miR-616-5p 0 0 1
chr7:91265988|91266320 hsa-miR-616-3p 0 0 1
chr7:91265988|91266320 hsa-miR-892a 0 0 1
chr7:91265988|91266320 hsa-miR-874-5p 0 0 1
chr7:91265988|91266320 hsa-miR-874-3p 0 0 1
chr7:91265988|91266320 hsa-miR-665 0 0 1
chr7:91265988|91266320 hsa-miR-873-5p 0 0 1
chr7:91265988|91266320 hsa-miR-873-3p 0 0 1
chr7:91265988|91266320 hsa-miR-1237-5p 0 0 1
chr7:91265988|91266320 hsa-miR-1237-3p 0 0 1
chr7:91265988|91266320 hsa-miR-1202 0 1 1
chr7:91265988|91266320 hsa-miR-663b 0 1 1
chr7:91265988|91266320 hsa-miR-1204 0 1 1
chr7:91265988|91266320 hsa-miR-1247-5p 0 0 1
chr7:91265988|91266320 hsa-miR-1247-3p 0 0 1
chr7:91265988|91266320 hsa-miR-1248 0 1 1
chr7:91265988|91266320 hsa-miR-1307-5p 0 0 1
chr7:91265988|91266320 hsa-miR-1307-3p 0 0 1
chr7:91265988|91266320 hsa-miR-671-5p 0 0 1
chr7:91265988|91266320 hsa-miR-125a-3p 0 1 1
chr7:91265988|91266320 hsa-miR-146b-3p 0 0 1
chr7:91265988|91266320 hsa-miR-362-3p 0 0 1
chr7:91265988|91266320 hsa-miR-128 0 0 1
chr7:91265988|91266320 hsa-miR-329 0 0 1
chr7:91265988|91266320 hsa-miR-219-1-3p 0 0 1
chr7:91265988|91266320 hsa-miR-608 1 0 0
chr7:91265988|91266320 hsa-miR-636 1 0 0
chr7:91265988|91266320 hsa-miR-662 1 0 0
chr7:91265988|91266320 hsa-miR-1183 1 0 0
chr7:91265988|91266320 hsa-miR-1203 1 0 0
chr7:91265988|91266320 hsa-miR-1539 0 1 0
chr7:91265988|91266320 hsa-miR-3147 1 0 0
chr7:91265988|91266320 hsa-miR-1193 1 0 0
chr7:91265988|91266320 hsa-miR-3195 1 0 0
chr7:91265988|91266320 hsa-miR-3196 1 0 0
chr7:91265988|91266320 hsa-miR-4290 0 1 0
chr7:91265988|91266320 hsa-miR-3657 0 1 0
chr7:91265988|91266320 hsa-miR-3937 0 1 0
chr7:91265988|91266320 hsa-miR-3941 0 1 0
chr7:91265988|91266320 hsa-miR-4467 1 0 0
chr7:91265988|91266320 hsa-miR-4479 1 0 0
chr7:91265988|91266320 hsa-miR-2392 0 1 0
chr7:91265988|91266320 hsa-miR-3972 0 1 0
chr7:91265988|91266320 hsa-miR-4647 0 1 0
chr7:91265988|91266320 hsa-miR-5685 0 1 0
chr7:91265988|91266320 hsa-miR-6069 1 0 0
chr7:91265988|91266320 hsa-miR-6075 1 1 0
chr7:91265988|91266320 hsa-miR-7706 1 1 0
chr7:91265988|91266320 hsa-miR-7974 1 0 0
chr7:91265988|91266320 hsa-miR-8060 0 1 0
chr7:91265988|91266320 hsa-miR-8082 0 1 0
chr7:91265988|91266320 hsa-miR-12115 1 0 0
chr7:91265988|91266320 hsa-miR-1233-3p 1 0 0
chr7:91265988|91266320 hsa-miR-766-5p 0 1 0
chr7:91265988|91266320 hsa-miR-6089 1 0 0
chr7:91265988|91266320 hsa-miR-6757-5p 1 0 0
chr7:91265988|91266320 hsa-miR-6746-5p 1 0 0
chr7:91265988|91266320 hsa-miR-4709-3p 1 1 0
chr7:91265988|91266320 hsa-miR-593-5p 1 0 0
chr7:91265988|91266320 hsa-miR-8069 1 0 0
chr7:91265988|91266320 hsa-miR-3189-5p 1 0 0
chr7:91265988|91266320 hsa-miR-7108-5p 1 0 0
chr7:91265988|91266320 hsa-miR-6868-3p 0 1 0
chr7:91265988|91266320 hsa-miR-6765-3p 0 1 0
chr7:91265988|91266320 hsa-miR-6874-5p 0 1 0
chr7:91265988|91266320 hsa-miR-3194-5p 0 1 0
chr7:91265988|91266320 hsa-miR-5006-5p 0 1 0
chr7:91265988|91266320 hsa-miR-4436b-5p 0 1 0
chr7:91265988|91266320 hsa-miR-4640-5p 1 0 0
chr7:91265988|91266320 hsa-miR-4732-5p 0 1 0
chr7:91265988|91266320 hsa-miR-6501-5p 1 0 0
chr7:91265988|91266320 hsa-miR-4743-5p 1 0 0
chr7:91265988|91266320 hsa-miR-4667-3p 0 1 0
chr7:91265988|91266320 hsa-miR-4733-3p 0 1 0
chr7:91265988|91266320 hsa-miR-7154-5p 0 1 0
chr7:91265988|91266320 hsa-miR-4715-5p 0 1 0
chr7:91265988|91266320 hsa-miR-339-5p 1 1 0
chr7:91265988|91266320 hsa-miR-6785-3p 0 1 0
chr7:91265988|91266320 hsa-miR-4687-5p 0 1 0
chr7:91265988|91266320 hsa-miR-4758-3p 0 1 0
chr7:91265988|91266320 hsa-miR-7112-3p 1 0 0
chr7:91265988|91266320 hsa-miR-3614-3p 0 1 0
chr7:91265988|91266320 hsa-miR-5088-3p 0 1 0
chr7:91265988|91266320 hsa-miR-25-3p 0 1 0
chr7:91265988|91266320 hsa-miR-4714-3p 1 0 0
chr7:91265988|91266320 hsa-miR-10400-5p 1 0 0
chr7:91265988|91266320 hsa-miR-6865-5p 1 0 0
chr7:91265988|91266320 hsa-miR-6756-5p 1 0 0
chr7:91265988|91266320 hsa-miR-6851-5p 1 0 0
chr7:91265988|91266320 hsa-miR-4632-5p 1 0 0
chr7:91265988|91266320 hsa-miR-6883-5p 1 0 0
chr7:91265988|91266320 hsa-miR-6831-5p 1 1 0
chr7:91265988|91266320 hsa-miR-10396a-3p 1 0 0
chr7:91265988|91266320 hsa-miR-10396b-3p 1 0 0
chr7:91265988|91266320 hsa-miR-6799-3p 1 0 0
chr7:91265988|91266320 hsa-miR-6775-3p 1 0 0
chr7:91265988|91266320 hsa-miR-6848-3p 0 1 0
chr7:91265988|91266320 hsa-miR-4690-3p 0 1 0
chr7:91265988|91266320 hsa-miR-32-5p 0 1 0
chr7:91265988|91266320 hsa-miR-3914 0 1 0
chr7:91265988|91266320 hsa-miR-3681-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:91265988|91266320
ORF Type ORF1
Protein Length 106
Nucleotide Length 318
Protein Sequence MEDRVVCNDKFAEDGARTVAQGTKKEGCTILFMMLYFFSMASSIWWVILSLTWFLAAGMKWGHEAIEANSQYFHLAAWAVPAIKTITILALGQVDGDVLSGVCFVG
Nucleotide Sequence CTGGAAGACCGAGTGGTGTGTAATGACAAGTTCGCCGAGGACGGGGCACGCACTGTGGCGCAGGGCACCAAGAAGGAGGGCTGCACCATCCTCTTCATGATGCTCTACTTCTTCAGCATGGCCAGCTCCATCTGGTGGGTGATCCTGTCGCTCACCTGGTTCCTGGCGGCTGGCATGAAGTGGGGCCACGAGGCCATCGAAGCCAACTCACAGTATTTTCACCTGGCCGCCTGGGCTGTGCCGGCCATCAAGACCATCACCATCCTGGCGCTGGGCCAGGTGGACGGCGATGTGCTGAGCGGAGTGTGCTTCGTGGGG
CircID chr7:91265988|91266320
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MTSSPRTGHALWRRAPRRRAAPSSS
Nucleotide Sequence ATGACAAGTTCGCCGAGGACGGGGCACGCACTGTGGCGCAGGGCACCAAGAAGGAGGGCTGCACCATCCTCTTCATGA
CircID chr7:91265988|91266320
ORF Type ORF3
Protein Length 79
Nucleotide Length 237
Protein Sequence MHHPLHDALLLQHGQLHLVGDPVAHLVPGGWHEVGPRGHRSQLTVFSPGRLGCAGHQDHHHPGAGPGGRRCAERSVLRG
Nucleotide Sequence CTGCACCATCCTCTTCATGATGCTCTACTTCTTCAGCATGGCCAGCTCCATCTGGTGGGTGATCCTGTCGCTCACCTGGTTCCTGGCGGCTGGCATGAAGTGGGGCCACGAGGCCATCGAAGCCAACTCACAGTATTTTCACCTGGCCGCCTGGGCTGTGCCGGCCATCAAGACCATCACCATCCTGGCGCTGGGCCAGGTGGACGGCGATGTGCTGAGCGGAGTGTGCTTCGTGGG
CircID chr7:91265988|91266320
ORF Type ORF4
Protein Length 26
Nucleotide Length 78
Protein Sequence MRHSACPVLGELVITHHSVFQEEAGD
Nucleotide Sequence CTGCGCCACAGTGCGTGCCCCGTCCTCGGCGAACTTGTCATTACACACCACTCGGTCTTCCAGGAGGAAGCCGGCGAT
CircID chr7:91265988|91266320
ORF Type ORF5
Protein Length 33
Nucleotide Length 102
Protein Sequence MASMASWPHFMPAARNQVSDRITHQMELAMLKK
Nucleotide Sequence TTGGCTTCGATGGCCTCGTGGCCCCACTTCATGCCAGCCGCCAGGAACCAGGTGAGCGACAGGATCACCCACCAGATGGAGCTGGCCATGCTGAAGAAGTAG
CircID chr7:91265988|91266320
ORF Type ORF6
Protein Length 37
Nucleotide Length 111
Protein Sequence MKRMVQPSFLVPCATVRAPSSANLSLHTTRSSRRKPA
Nucleotide Sequence ATGAAGAGGATGGTGCAGCCCTCCTTCTTGGTGCCCTGCGCCACAGTGCGTGCCCCGTCCTCGGCGAACTTGTCATTACACACCACTCGGTCTTCCAGGAGGAAGCCGGCG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab