CircRNA Information

General Information
circRNA Basic Information
CircID chr7:94407854|94408234
Strand -
CircType exon
Host Gene ENSG00000164692.16;
Algorism CIRI2;
Sequence CTGGTGCCCCTGGTGAAAATGGAACTCCAGGTCAAACAGTAAGTATTGACTACTTCATTGTAAATTTAAATGTGTACACTCTTTATGAGATGGAACTTCTTTAATGTTTTTGCTAATCACTGTATCCTTCAGCATTGTATTCTTTGATGTTTTTCTAATAGCCTTCTGATACTTAATTGAAATCCACTACTGTTTAGTTGGAATTAGAAGGCAACTTATTTATTTTTAGTGTATTCTTGTACAGGTTGGAAACTGAACAAAGCAAATGATGCCTGTGACTTTTTTTAAATTAGCATTCTGGATTTTATTGAAAATATTTCTGCTTCTAGGGAGCCCGTGGGCTTCCTGGTGAGAGAGGACGTGTTGGTGCCCCTGGCCCAG
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:94407854|94408234 hsa-miR-192-5p 0 0 1
chr7:94407854|94408234 hsa-miR-192-3p 0 0 1
chr7:94407854|94408234 hsa-miR-197-5p 0 0 1
chr7:94407854|94408234 hsa-miR-197-3p 0 0 1
chr7:94407854|94408234 hsa-miR-215-5p 0 0 1
chr7:94407854|94408234 hsa-miR-215-3p 0 0 1
chr7:94407854|94408234 hsa-miR-224-5p 0 0 1
chr7:94407854|94408234 hsa-miR-224-3p 0 0 1
chr7:94407854|94408234 hsa-miR-186-5p 0 0 1
chr7:94407854|94408234 hsa-miR-186-3p 0 0 1
chr7:94407854|94408234 hsa-miR-375-5p 0 0 1
chr7:94407854|94408234 hsa-miR-375-3p 0 0 1
chr7:94407854|94408234 hsa-miR-382-5p 0 0 1
chr7:94407854|94408234 hsa-miR-382-3p 0 0 1
chr7:94407854|94408234 hsa-miR-452-5p 0 0 1
chr7:94407854|94408234 hsa-miR-452-3p 0 0 1
chr7:94407854|94408234 hsa-miR-579-5p 0 0 1
chr7:94407854|94408234 hsa-miR-579-3p 0 0 1
chr7:94407854|94408234 hsa-miR-583 0 0 1
chr7:94407854|94408234 hsa-miR-619-5p 0 0 1
chr7:94407854|94408234 hsa-miR-619-3p 0 0 1
chr7:94407854|94408234 hsa-miR-631 0 0 1
chr7:94407854|94408234 hsa-miR-649 0 0 1
chr7:94407854|94408234 hsa-miR-1226-5p 0 0 1
chr7:94407854|94408234 hsa-miR-1226-3p 0 0 1
chr7:94407854|94408234 hsa-miR-1229-5p 0 0 1
chr7:94407854|94408234 hsa-miR-1229-3p 0 0 1
chr7:94407854|94408234 hsa-miR-1290 0 0 1
chr7:94407854|94408234 hsa-miR-1305 0 0 1
chr7:94407854|94408234 hsa-miR-1276 0 0 1
chr7:94407854|94408234 hsa-miR-548p 0 0 1
chr7:94407854|94408234 hsa-miR-1252-5p 0 0 1
chr7:94407854|94408234 hsa-miR-1252-3p 0 0 1
chr7:94407854|94408234 hsa-miR-671-5p 0 1 1
chr7:94407854|94408234 hsa-miR-486-5p 0 0 1
chr7:94407854|94408234 hsa-miR-361-5p 0 0 1
chr7:94407854|94408234 hsa-miR-513a-5p 0 0 1
chr7:94407854|94408234 hsa-miR-576-5p 0 0 1
chr7:94407854|94408234 hsa-miR-199b-3p 0 0 1
chr7:94407854|94408234 hsa-miR-199a-3p 0 0 1
chr7:94407854|94408234 hsa-miR-513a-3p 0 0 1
chr7:94407854|94408234 hsa-miR-876-5p 0 0 1
chr7:94407854|94408234 hsa-miR-548c-3p 0 0 1
chr7:94407854|94408234 hsa-miR-220c 0 0 1
chr7:94407854|94408234 hsa-miR-3183 0 1 0
chr7:94407854|94408234 hsa-miR-4254 0 1 0
chr7:94407854|94408234 hsa-miR-4422 0 1 0
chr7:94407854|94408234 hsa-miR-3135b 1 0 0
chr7:94407854|94408234 hsa-miR-4688 0 1 0
chr7:94407854|94408234 hsa-miR-9899 1 0 0
chr7:94407854|94408234 hsa-miR-12119 1 0 0
chr7:94407854|94408234 hsa-miR-12125 0 1 0
chr7:94407854|94408234 hsa-miR-4695-5p 1 0 0
chr7:94407854|94408234 hsa-miR-593-5p 0 1 0
chr7:94407854|94408234 hsa-miR-4640-5p 1 1 0
chr7:94407854|94408234 hsa-miR-6753-5p 0 1 0
chr7:94407854|94408234 hsa-miR-7111-3p 0 1 0
chr7:94407854|94408234 hsa-miR-4733-3p 0 1 0
chr7:94407854|94408234 hsa-miR-6789-5p 1 0 0
chr7:94407854|94408234 hsa-miR-3160-5p 0 1 0
chr7:94407854|94408234 hsa-miR-4423-5p 0 1 0
chr7:94407854|94408234 hsa-miR-4763-3p 1 0 0
chr7:94407854|94408234 hsa-miR-6743-5p 1 1 0
chr7:94407854|94408234 hsa-miR-1909-3p 1 0 0
chr7:94407854|94408234 hsa-miR-328-5p 1 0 0
chr7:94407854|94408234 hsa-miR-4649-5p 1 0 0
chr7:94407854|94408234 hsa-miR-4726-5p 0 1 0
chr7:94407854|94408234 hsa-miR-9851-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr7:94407854|94408234
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MCTLFMRWNFFNVFANHCILQHCIL
Nucleotide Sequence ATGTGTACACTCTTTATGAGATGGAACTTCTTTAATGTTTTTGCTAATCACTGTATCCTTCAGCATTGTATTCTTTGA
CircID chr7:94407854|94408234
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MDFIENISASREPVGFLVREDVLVPLAQ
Nucleotide Sequence CTGGATTTTATTGAAAATATTTCTGCTTCTAGGGAGCCCGTGGGCTTCCTGGTGAGAGAGGACGTGTTGGTGCCCCTGGCCCAG
CircID chr7:94407854|94408234
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MMPVTFFKLAFWILLKIFLLLGSPWASW
Nucleotide Sequence ATGATGCCTGTGACTTTTTTTAAATTAGCATTCTGGATTTTATTGAAAATATTTCTGCTTCTAGGGAGCCCGTGGGCTTCCTGGTGA
CircID chr7:94407854|94408234
ORF Type ORF4
Protein Length 51
Nucleotide Length 156
Protein Sequence LGQGHQHVLSHQEAHGLPRSRNIFNKIQNANLKKVTGIICFVQFPTCTRIH
Nucleotide Sequence CTGGGCCAGGGGCACCAACACGTCCTCTCTCACCAGGAAGCCCACGGGCTCCCTAGAAGCAGAAATATTTTCAATAAAATCCAGAATGCTAATTTAAAAAAAGTCACAGGCATCATTTGCTTTGTTCAGTTTCCAACCTGTACAAGAATACACTAA
CircID chr7:94407854|94408234
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MLKDTVISKNIKEVPSHKECTHLNLQ
Nucleotide Sequence ATGCTGAAGGATACAGTGATTAGCAAAAACATTAAAGAAGTTCCATCTCATAAAGAGTGTACACATTTAAATTTACAATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab