CircRNA Information

General Information
circRNA Basic Information
CircID chr7:94413700|94417742
Strand +
CircType exon
Host Gene ENSG00000164692.16;
Algorism CIRI2;
Sequence CAACCACACCAGGTTCACCCTTGTTTCCATCAGGCCCTGGGGGTCCAGAAGGACCTCGGCTTCCAATAGGACCAGTAGGACCGGCAGCACCACTCTCACCTGGGGGACCGCGTTCCCCTCTTGGACCAGCAGGACCAGGGAGACCAAACTCACCATGGAGACCCCTTTCTCCTGGTTTGCCAACTTCACCAGCGGGACCTGAGGGGCCAGGCAGACCCTGGAAGCCTGGAGGACCAGGGGGACCCTGTTCACCTTTTCCACCTTGAACACCCTGTGGTCCAGGAGGTCCCTGAGCACCATTGTTTCCATCAGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:94413700|94417742 hsa-miR-182-5p 0 0 1
chr7:94413700|94417742 hsa-miR-182-3p 0 0 1
chr7:94413700|94417742 hsa-miR-136-5p 0 0 1
chr7:94413700|94417742 hsa-miR-136-3p 0 0 1
chr7:94413700|94417742 hsa-miR-370-5p 0 0 1
chr7:94413700|94417742 hsa-miR-370-3p 0 0 1
chr7:94413700|94417742 hsa-miR-133b 0 0 1
chr7:94413700|94417742 hsa-miR-346 0 0 1
chr7:94413700|94417742 hsa-miR-422a 0 0 1
chr7:94413700|94417742 hsa-miR-609 0 0 1
chr7:94413700|94417742 hsa-miR-661 1 0 1
chr7:94413700|94417742 hsa-miR-665 0 0 1
chr7:94413700|94417742 hsa-miR-1182 1 0 1
chr7:94413700|94417742 hsa-miR-1237-5p 0 0 1
chr7:94413700|94417742 hsa-miR-1237-3p 0 0 1
chr7:94413700|94417742 hsa-miR-1299 0 0 1
chr7:94413700|94417742 hsa-miR-1248 0 0 1
chr7:94413700|94417742 hsa-miR-1266-5p 0 0 1
chr7:94413700|94417742 hsa-miR-1266-3p 0 0 1
chr7:94413700|94417742 hsa-miR-1292-5p 0 0 1
chr7:94413700|94417742 hsa-miR-1292-3p 0 0 1
chr7:94413700|94417742 hsa-miR-671-5p 0 0 1
chr7:94413700|94417742 hsa-miR-125a-3p 1 0 1
chr7:94413700|94417742 hsa-miR-490-3p 0 0 1
chr7:94413700|94417742 hsa-miR-361-3p 0 0 1
chr7:94413700|94417742 hsa-miR-331-3p 0 0 1
chr7:94413700|94417742 hsa-miR-140-3p 0 0 1
chr7:94413700|94417742 hsa-miR-220c 0 0 1
chr7:94413700|94417742 hsa-miR-378 0 0 1
chr7:94413700|94417742 hsa-miR-138 0 0 1
chr7:94413700|94417742 hsa-miR-516b 0 0 1
chr7:94413700|94417742 hsa-miR-1254 0 0 1
chr7:94413700|94417742 hsa-miR-1201 0 0 1
chr7:94413700|94417742 hsa-miR-133a 0 0 1
chr7:94413700|94417742 hsa-miR-611 1 0 0
chr7:94413700|94417742 hsa-miR-638 1 0 0
chr7:94413700|94417742 hsa-miR-2861 1 0 0
chr7:94413700|94417742 hsa-miR-4281 1 0 0
chr7:94413700|94417742 hsa-miR-3907 1 0 0
chr7:94413700|94417742 hsa-miR-3918 1 0 0
chr7:94413700|94417742 hsa-miR-1268b 1 0 0
chr7:94413700|94417742 hsa-miR-4481 1 0 0
chr7:94413700|94417742 hsa-miR-4739 1 0 0
chr7:94413700|94417742 hsa-miR-6085 1 0 0
chr7:94413700|94417742 hsa-miR-12116 1 0 0
chr7:94413700|94417742 hsa-miR-6749-3p 1 0 0
chr7:94413700|94417742 hsa-miR-3692-5p 1 0 0
chr7:94413700|94417742 hsa-miR-6089 1 0 0
chr7:94413700|94417742 hsa-miR-615-5p 1 0 0
chr7:94413700|94417742 hsa-miR-6784-5p 1 0 0
chr7:94413700|94417742 hsa-miR-3127-5p 1 0 0
chr7:94413700|94417742 hsa-miR-6749-5p 1 0 0
chr7:94413700|94417742 hsa-miR-4743-5p 1 0 0
chr7:94413700|94417742 hsa-miR-4446-3p 1 0 0
chr7:94413700|94417742 hsa-miR-6886-5p 1 0 0
chr7:94413700|94417742 hsa-miR-6828-5p 1 0 0
chr7:94413700|94417742 hsa-miR-6781-5p 1 0 0
chr7:94413700|94417742 hsa-miR-4746-3p 1 0 0
chr7:94413700|94417742 hsa-miR-6775-5p 1 0 0
chr7:94413700|94417742 hsa-miR-1343-5p 1 0 0
chr7:94413700|94417742 hsa-miR-6756-5p 1 0 0
chr7:94413700|94417742 hsa-miR-6722-3p 1 0 0
chr7:94413700|94417742 hsa-miR-4685-5p 1 0 0
chr7:94413700|94417742 hsa-miR-4726-5p 1 0 0
chr7:94413700|94417742 hsa-miR-4745-5p 1 0 0
chr7:94413700|94417742 hsa-miR-6795-5p 1 0 0
chr7:94413700|94417742 hsa-miR-6848-5p 1 0 0
chr7:94413700|94417742 hsa-miR-6856-5p 1 0 0
chr7:94413700|94417742 hsa-miR-1914-3p 1 0 0
chr7:94413700|94417742 hsa-miR-6750-5p 1 0 0
chr7:94413700|94417742 hsa-miR-6791-5p 1 0 0
chr7:94413700|94417742 hsa-miR-193b-3p 1 0 0
chr7:94413700|94417742 hsa-miR-6837-5p 1 0 0
chr7:94413700|94417742 hsa-miR-6744-3p 1 0 0
chr7:94413700|94417742 hsa-miR-10394-5p 1 0 0
chr7:94413700|94417742 hsa-miR-4691-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr7:94413700|94417742
ORF Type ORF1
Protein Length 72
Nucleotide Length 216
Protein Sequence MGDRVPLLDQQDQGDQTHHGDPFLLVCQLHQRDLRGQADPGSLEDQGDPVHLFHLEHPVVQEVPEHHCFHQD
Nucleotide Sequence CTGGGGGACCGCGTTCCCCTCTTGGACCAGCAGGACCAGGGAGACCAAACTCACCATGGAGACCCCTTTCTCCTGGTTTGCCAACTTCACCAGCGGGACCTGAGGGGCCAGGCAGACCCTGGAAGCCTGGAGGACCAGGGGGACCCTGTTCACCTTTTCCACCTTGAACACCCTGTGGTCCAGGAGGTCCCTGAGCACCATTGTTTCCATCAGGAC
CircID chr7:94413700|94417742
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MEAWRTRGTLFTFSTLNTLWSRRSLSTIVSIR
Nucleotide Sequence CTGGAAGCCTGGAGGACCAGGGGGACCCTGTTCACCTTTTCCACCTTGAACACCCTGTGGTCCAGGAGGTCCCTGAGCACCATTGTTTCCATCAGG
CircID chr7:94413700|94417742
ORF Type ORF3
Protein Length 81
Nucleotide Length 246
Protein Sequence MFPSGPGGPEGPRLPIGPVGPAAPLSPGGPRSPLGPAGPGRPNSPWRPLSPGLPTSPAGPEGPGRPWKPGGPGGPCSPFPP
Nucleotide Sequence TTGTTTCCATCAGGCCCTGGGGGTCCAGAAGGACCTCGGCTTCCAATAGGACCAGTAGGACCGGCAGCACCACTCTCACCTGGGGGACCGCGTTCCCCTCTTGGACCAGCAGGACCAGGGAGACCAAACTCACCATGGAGACCCCTTTCTCCTGGTTTGCCAACTTCACCAGCGGGACCTGAGGGGCCAGGCAGACCCTGGAAGCCTGGAGGACCAGGGGGACCCTGTTCACCTTTTCCACCTTGA
CircID chr7:94413700|94417742
ORF Type ORF4
Protein Length 104
Nucleotide Length 312
Protein Sequence MMETMVLRDLLDHRVFKVEKVNRVPLVLQASRVCLAPQVPLVKLANQEKGVSMVSLVSLVLLVQEGNAVPQVRVVLPVLLVLLEAEVLLDPQGLMETRVNLVWL
Nucleotide Sequence CTGATGGAAACAATGGTGCTCAGGGACCTCCTGGACCACAGGGTGTTCAAGGTGGAAAAGGTGAACAGGGTCCCCCTGGTCCTCCAGGCTTCCAGGGTCTGCCTGGCCCCTCAGGTCCCGCTGGTGAAGTTGGCAAACCAGGAGAAAGGGGTCTCCATGGTGAGTTTGGTCTCCCTGGTCCTGCTGGTCCAAGAGGGGAACGCGGTCCCCCAGGTGAGAGTGGTGCTGCCGGTCCTACTGGTCCTATTGGAAGCCGAGGTCCTTCTGGACCCCCAGGGCCTGATGGAAACAAGGGTGAACCTGGTGTGGTTG
CircID chr7:94413700|94417742
ORF Type ORF5
Protein Length 71
Nucleotide Length 213
Protein Sequence MPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVV
Nucleotide Sequence CTGCCTGGCCCCTCAGGTCCCGCTGGTGAAGTTGGCAAACCAGGAGAAAGGGGTCTCCATGGTGAGTTTGGTCTCCCTGGTCCTGCTGGTCCAAGAGGGGAACGCGGTCCCCCAGGTGAGAGTGGTGCTGCCGGTCCTACTGGTCCTATTGGAAGCCGAGGTCCTTCTGGACCCCCAGGGCCTGATGGAAACAAGGGTGAACCTGGTGTGGTT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab