CircRNA Information

General Information
circRNA Basic Information
CircID chr7:94418499|94420286
Strand +
CircType exon
Host Gene ENSG00000164692.17;
Algorism find_circ;CIRI2;DCC;
Sequence GGTGAACCTGGTCTCAGAGGTGAAATTGGTAACCCTGGCAGAGATGGTGCTCGTGGTGCTCCTGGTGCTGTAGGTGCCCCTGGTCCTGCTGGAGCCACAGGTGACCGGGGCGAAGCTGGGGCTGCTGGTCCTGCTGGTCCTGCTGGTCCTCGGGGAAGCCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:94418499|94420286 hsa-miR-370-5p 0 0 1
chr7:94418499|94420286 hsa-miR-370-3p 0 0 1
chr7:94418499|94420286 hsa-miR-552-5p 0 0 1
chr7:94418499|94420286 hsa-miR-552-3p 0 0 1
chr7:94418499|94420286 hsa-miR-1287-5p 0 0 1
chr7:94418499|94420286 hsa-miR-1287-3p 0 0 1
chr7:94418499|94420286 hsa-miR-671-5p 1 0 1
chr7:94418499|94420286 hsa-miR-125a-3p 0 0 1
chr7:94418499|94420286 hsa-miR-542-5p 0 0 1
chr7:94418499|94420286 hsa-miR-490-3p 0 0 1
chr7:94418499|94420286 hsa-miR-331-3p 0 1 1
chr7:94418499|94420286 hsa-miR-138 0 0 1
chr7:94418499|94420286 hsa-miR-612 1 0 0
chr7:94418499|94420286 hsa-miR-636 1 0 0
chr7:94418499|94420286 hsa-miR-637 1 0 0
chr7:94418499|94420286 hsa-miR-663a 1 0 0
chr7:94418499|94420286 hsa-miR-1183 1 0 0
chr7:94418499|94420286 hsa-miR-1469 1 0 0
chr7:94418499|94420286 hsa-miR-1538 1 0 0
chr7:94418499|94420286 hsa-miR-3132 1 0 0
chr7:94418499|94420286 hsa-miR-3196 1 0 0
chr7:94418499|94420286 hsa-miR-4257 0 1 0
chr7:94418499|94420286 hsa-miR-3661 1 0 0
chr7:94418499|94420286 hsa-miR-3907 1 1 0
chr7:94418499|94420286 hsa-miR-3936 1 0 0
chr7:94418499|94420286 hsa-miR-3135b 0 1 0
chr7:94418499|94420286 hsa-miR-4463 1 0 0
chr7:94418499|94420286 hsa-miR-4486 1 0 0
chr7:94418499|94420286 hsa-miR-4518 1 0 0
chr7:94418499|94420286 hsa-miR-4647 1 1 0
chr7:94418499|94420286 hsa-miR-4656 1 0 0
chr7:94418499|94420286 hsa-miR-5787 1 0 0
chr7:94418499|94420286 hsa-miR-6131 0 1 0
chr7:94418499|94420286 hsa-miR-8073 1 1 0
chr7:94418499|94420286 hsa-miR-8089 1 0 0
chr7:94418499|94420286 hsa-miR-12122 0 1 0
chr7:94418499|94420286 hsa-miR-4731-5p 0 1 0
chr7:94418499|94420286 hsa-miR-25-5p 1 0 0
chr7:94418499|94420286 hsa-miR-3692-5p 0 1 0
chr7:94418499|94420286 hsa-miR-6089 1 0 0
chr7:94418499|94420286 hsa-miR-6762-3p 0 1 0
chr7:94418499|94420286 hsa-miR-6727-5p 1 0 0
chr7:94418499|94420286 hsa-miR-6842-3p 1 0 0
chr7:94418499|94420286 hsa-miR-6721-5p 1 0 0
chr7:94418499|94420286 hsa-miR-197-5p 1 0 0
chr7:94418499|94420286 hsa-miR-3663-5p 1 1 0
chr7:94418499|94420286 hsa-miR-3180-3p 1 0 0
chr7:94418499|94420286 hsa-miR-185-3p 1 1 0
chr7:94418499|94420286 hsa-miR-6829-5p 0 1 0
chr7:94418499|94420286 hsa-miR-6821-5p 1 0 0
chr7:94418499|94420286 hsa-miR-6772-3p 1 1 0
chr7:94418499|94420286 hsa-miR-3944-3p 1 0 0
chr7:94418499|94420286 hsa-miR-6784-5p 1 0 0
chr7:94418499|94420286 hsa-miR-6753-5p 1 0 0
chr7:94418499|94420286 hsa-miR-652-5p 1 0 0
chr7:94418499|94420286 hsa-miR-4756-3p 1 1 0
chr7:94418499|94420286 hsa-miR-3677-3p 1 0 0
chr7:94418499|94420286 hsa-miR-149-3p 1 0 0
chr7:94418499|94420286 hsa-miR-6789-5p 1 0 0
chr7:94418499|94420286 hsa-miR-7152-3p 0 1 0
chr7:94418499|94420286 hsa-miR-4746-3p 1 0 0
chr7:94418499|94420286 hsa-miR-1207-5p 1 0 0
chr7:94418499|94420286 hsa-miR-4763-3p 1 1 0
chr7:94418499|94420286 hsa-miR-6787-5p 1 0 0
chr7:94418499|94420286 hsa-miR-6816-5p 1 0 0
chr7:94418499|94420286 hsa-miR-6870-5p 1 0 0
chr7:94418499|94420286 hsa-miR-6775-5p 1 0 0
chr7:94418499|94420286 hsa-miR-6726-5p 1 0 0
chr7:94418499|94420286 hsa-miR-6756-5p 1 0 0
chr7:94418499|94420286 hsa-miR-6813-5p 1 0 0
chr7:94418499|94420286 hsa-miR-6808-5p 1 0 0
chr7:94418499|94420286 hsa-miR-6848-5p 1 0 0
chr7:94418499|94420286 hsa-miR-939-5p 1 0 0
chr7:94418499|94420286 hsa-miR-4758-5p 1 0 0
chr7:94418499|94420286 hsa-miR-6893-3p 0 1 0
chr7:94418499|94420286 hsa-miR-10394-5p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr7:94418499|94420286
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MWLQQDQGHLQHQEHHEHHLCQGYQFHL
Nucleotide Sequence CTGTGGCTCCAGCAGGACCAGGGGCACCTACAGCACCAGGAGCACCACGAGCACCATCTCTGCCAGGGTTACCAATTTCACCTCTGA
CircID chr7:94418499|94420286
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MVLLEPQVTGAKLGLLVLLVLLVLGEA
Nucleotide Sequence CTGGTCCTGCTGGAGCCACAGGTGACCGGGGCGAAGCTGGGGCTGCTGGTCCTGCTGGTCCTGCTGGTCCTCGGGGAAGCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr7:94418499|94420286 RBFOX2 1 0 0
chr7:94418499|94420286 ADAR 0 1 0
chr7:94418499|94420286 LIN28A 0 1 0
chr7:94418499|94420286 DKC1 1 0 0
chr7:94418499|94420286 IGF2BP2 4 11 1
chr7:94418499|94420286 AGO2 0 1 0
chr7:94418499|94420286 FUS 1 0 0
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab