CircRNA Information

General Information
circRNA Basic Information
CircID chr7:94425750|94426459
Strand +
CircType exon
Host Gene ENSG00000164692.16;
Algorism CIRI2;
Sequence CGGGCTCTCCCTTATCGCCACGAATGCCTTGTGGGCCACTAGGACCTCTTGGGCCAACAGCACCAGCAGGACCAACAGGACCAGAAGGACCCTGTGAAATGAAAAAGAAAAACACAACTTAGCTAGGCCCAAGATACCCCTCCCCACTCCTCCACCATCCCCAAGTGTGGGGAAGTCAGAAGTGAAGCCCACGAGAATGCTGCACTGAGGGACTGGTATTCACAAACTTACAGTTTCACCACGGTTTCCATGTTTGCCAGCAGGACCCACGGGGCCATGAGGACCAGGTGCACCTGCAGCACCAACGGGACCAATATTGCCAGGGTAACCGCGCTCTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:94425750|94426459 hsa-miR-27a-5p 0 0 1
chr7:94425750|94426459 hsa-miR-27a-3p 0 0 1
chr7:94425750|94426459 hsa-miR-107 1 1 1
chr7:94425750|94426459 hsa-miR-148a-5p 0 0 1
chr7:94425750|94426459 hsa-miR-148a-3p 0 0 1
chr7:94425750|94426459 hsa-miR-10a-5p 0 0 1
chr7:94425750|94426459 hsa-miR-10a-3p 0 0 1
chr7:94425750|94426459 hsa-miR-10b-5p 0 0 1
chr7:94425750|94426459 hsa-miR-10b-3p 0 0 1
chr7:94425750|94426459 hsa-miR-27b-5p 0 0 1
chr7:94425750|94426459 hsa-miR-27b-3p 0 0 1
chr7:94425750|94426459 hsa-miR-152-5p 0 0 1
chr7:94425750|94426459 hsa-miR-152-3p 0 0 1
chr7:94425750|94426459 hsa-miR-370-5p 0 0 1
chr7:94425750|94426459 hsa-miR-370-3p 0 0 1
chr7:94425750|94426459 hsa-miR-382-5p 0 0 1
chr7:94425750|94426459 hsa-miR-382-3p 0 0 1
chr7:94425750|94426459 hsa-miR-328-5p 0 0 1
chr7:94425750|94426459 hsa-miR-328-3p 0 0 1
chr7:94425750|94426459 hsa-miR-148b-5p 0 0 1
chr7:94425750|94426459 hsa-miR-148b-3p 0 0 1
chr7:94425750|94426459 hsa-miR-133b 0 0 1
chr7:94425750|94426459 hsa-miR-345-5p 0 0 1
chr7:94425750|94426459 hsa-miR-345-3p 0 0 1
chr7:94425750|94426459 hsa-miR-579-5p 0 0 1
chr7:94425750|94426459 hsa-miR-579-3p 0 0 1
chr7:94425750|94426459 hsa-miR-617 0 1 1
chr7:94425750|94426459 hsa-miR-635 0 0 1
chr7:94425750|94426459 hsa-miR-657 0 0 1
chr7:94425750|94426459 hsa-miR-758-5p 0 0 1
chr7:94425750|94426459 hsa-miR-758-3p 0 0 1
chr7:94425750|94426459 hsa-miR-765 0 1 1
chr7:94425750|94426459 hsa-miR-939-5p 0 0 1
chr7:94425750|94426459 hsa-miR-939-3p 0 0 1
chr7:94425750|94426459 hsa-miR-1179 0 0 1
chr7:94425750|94426459 hsa-miR-1237-5p 0 0 1
chr7:94425750|94426459 hsa-miR-1237-3p 0 0 1
chr7:94425750|94426459 hsa-miR-663b 1 0 1
chr7:94425750|94426459 hsa-miR-1204 0 0 1
chr7:94425750|94426459 hsa-miR-1205 0 0 1
chr7:94425750|94426459 hsa-miR-1248 0 0 1
chr7:94425750|94426459 hsa-miR-1257 0 0 1
chr7:94425750|94426459 hsa-miR-548g-5p 0 0 1
chr7:94425750|94426459 hsa-miR-548g-3p 0 0 1
chr7:94425750|94426459 hsa-miR-491-5p 0 0 1
chr7:94425750|94426459 hsa-miR-409-5p 0 1 1
chr7:94425750|94426459 hsa-miR-513a-5p 0 0 1
chr7:94425750|94426459 hsa-miR-103 0 0 1
chr7:94425750|94426459 hsa-miR-220c 0 0 1
chr7:94425750|94426459 hsa-miR-138 0 0 1
chr7:94425750|94426459 hsa-miR-133a 0 0 1
chr7:94425750|94426459 hsa-miR-608 1 0 0
chr7:94425750|94426459 hsa-miR-638 1 0 0
chr7:94425750|94426459 hsa-miR-762 1 0 0
chr7:94425750|94426459 hsa-miR-764 0 1 0
chr7:94425750|94426459 hsa-miR-1183 1 0 0
chr7:94425750|94426459 hsa-miR-1268a 1 0 0
chr7:94425750|94426459 hsa-miR-2110 1 0 0
chr7:94425750|94426459 hsa-miR-1193 0 1 0
chr7:94425750|94426459 hsa-miR-1268b 1 0 0
chr7:94425750|94426459 hsa-miR-4440 1 0 0
chr7:94425750|94426459 hsa-miR-4443 1 0 0
chr7:94425750|94426459 hsa-miR-4449 1 0 0
chr7:94425750|94426459 hsa-miR-4450 1 0 0
chr7:94425750|94426459 hsa-miR-4457 0 1 0
chr7:94425750|94426459 hsa-miR-4470 1 1 0
chr7:94425750|94426459 hsa-miR-4479 1 0 0
chr7:94425750|94426459 hsa-miR-4488 1 0 0
chr7:94425750|94426459 hsa-miR-4534 1 0 0
chr7:94425750|94426459 hsa-miR-4651 1 0 0
chr7:94425750|94426459 hsa-miR-4706 1 0 0
chr7:94425750|94426459 hsa-miR-4767 1 0 0
chr7:94425750|94426459 hsa-miR-6127 1 0 0
chr7:94425750|94426459 hsa-miR-8077 1 0 0
chr7:94425750|94426459 hsa-miR-8089 0 1 0
chr7:94425750|94426459 hsa-miR-9899 1 0 0
chr7:94425750|94426459 hsa-miR-12114 1 0 0
chr7:94425750|94426459 hsa-miR-12127 1 1 0
chr7:94425750|94426459 hsa-miR-138-5p 1 1 0
chr7:94425750|94426459 hsa-miR-4433b-3p 1 1 0
chr7:94425750|94426459 hsa-miR-4433a-3p 1 1 0
chr7:94425750|94426459 hsa-miR-671-5p 1 1 0
chr7:94425750|94426459 hsa-miR-133a-5p 1 1 0
chr7:94425750|94426459 hsa-miR-7106-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6825-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6894-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6857-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6728-5p 1 0 0
chr7:94425750|94426459 hsa-miR-3692-5p 1 1 0
chr7:94425750|94426459 hsa-miR-8071 1 0 0
chr7:94425750|94426459 hsa-miR-6880-5p 1 1 0
chr7:94425750|94426459 hsa-miR-7847-3p 1 1 0
chr7:94425750|94426459 hsa-miR-3677-5p 1 0 0
chr7:94425750|94426459 hsa-miR-1301-3p 1 0 0
chr7:94425750|94426459 hsa-miR-6741-5p 1 0 0
chr7:94425750|94426459 hsa-miR-874-3p 1 0 0
chr7:94425750|94426459 hsa-miR-3663-5p 0 1 0
chr7:94425750|94426459 hsa-miR-6742-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6716-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6793-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6868-3p 0 1 0
chr7:94425750|94426459 hsa-miR-6782-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6821-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6810-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6786-5p 1 0 0
chr7:94425750|94426459 hsa-miR-1909-5p 1 0 0
chr7:94425750|94426459 hsa-miR-2277-3p 1 0 0
chr7:94425750|94426459 hsa-miR-1229-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6771-5p 1 0 0
chr7:94425750|94426459 hsa-miR-3677-3p 0 1 0
chr7:94425750|94426459 hsa-miR-877-5p 1 0 0
chr7:94425750|94426459 hsa-miR-103a-3p 1 1 0
chr7:94425750|94426459 hsa-miR-6824-5p 1 0 0
chr7:94425750|94426459 hsa-miR-7152-3p 1 1 0
chr7:94425750|94426459 hsa-miR-2114-5p 0 1 0
chr7:94425750|94426459 hsa-miR-6804-3p 0 1 0
chr7:94425750|94426459 hsa-miR-381-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6837-3p 0 1 0
chr7:94425750|94426459 hsa-miR-2277-5p 1 0 0
chr7:94425750|94426459 hsa-miR-624-5p 0 1 0
chr7:94425750|94426459 hsa-miR-500a-3p 0 1 0
chr7:94425750|94426459 hsa-miR-431-5p 0 1 0
chr7:94425750|94426459 hsa-miR-133a-3p 0 1 0
chr7:94425750|94426459 hsa-miR-6769b-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6870-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6752-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6756-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6803-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6819-5p 1 0 0
chr7:94425750|94426459 hsa-miR-7110-5p 1 0 0
chr7:94425750|94426459 hsa-miR-10401-5p 1 0 0
chr7:94425750|94426459 hsa-miR-11181-3p 1 0 0
chr7:94425750|94426459 hsa-miR-1249-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6722-3p 1 0 0
chr7:94425750|94426459 hsa-miR-6751-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6763-5p 1 1 0
chr7:94425750|94426459 hsa-miR-6779-5p 1 0 0
chr7:94425750|94426459 hsa-miR-7111-5p 1 0 0
chr7:94425750|94426459 hsa-miR-4745-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6858-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6883-5p 0 1 0
chr7:94425750|94426459 hsa-miR-4758-5p 1 0 0
chr7:94425750|94426459 hsa-miR-377-5p 1 0 0
chr7:94425750|94426459 hsa-miR-6724-5p 1 0 0
chr7:94425750|94426459 hsa-miR-9851-5p 1 1 0
chr7:94425750|94426459 hsa-miR-10394-5p 0 1 0
chr7:94425750|94426459 hsa-miR-7155-3p 0 1 0
chr7:94425750|94426459 hsa-miR-195-3p 0 1 0
chr7:94425750|94426459 hsa-miR-301a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:94425750|94426459
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MRDWYSQTYSFTTVSMFASRTHGAMRTRCTCSTNGTNIARVTALS
Nucleotide Sequence CTGAGGGACTGGTATTCACAAACTTACAGTTTCACCACGGTTTCCATGTTTGCCAGCAGGACCCACGGGGCCATGAGGACCAGGTGCACCTGCAGCACCAACGGGACCAATATTGCCAGGGTAACCGCGCTCTCC
CircID chr7:94425750|94426459
ORF Type ORF2
Protein Length 32
Nucleotide Length 99
Protein Sequence MPCGPLGPLGPTAPAGPTGPEGPCEMKKKNTT
Nucleotide Sequence ATGCCTTGTGGGCCACTAGGACCTCTTGGGCCAACAGCACCAGCAGGACCAACAGGACCAGAAGGACCCTGTGAAATGAAAAAGAAAAACACAACTTAG
CircID chr7:94425750|94426459
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MVFTNLQFHHGFHVCQQDPRGHEDQVHLQHQRDQYCQGNRAL
Nucleotide Sequence CTGGTATTCACAAACTTACAGTTTCACCACGGTTTCCATGTTTGCCAGCAGGACCCACGGGGCCATGAGGACCAGGTGCACCTGCAGCACCAACGGGACCAATATTGCCAGGGTAACCGCGCTCTC
CircID chr7:94425750|94426459
ORF Type ORF4
Protein Length 44
Nucleotide Length 132
Protein Sequence MGLAKLCFSFSFHRVLLVLLVLLVLLAQEVLVAHKAFVAIRESP
Nucleotide Sequence TTGGGCCTAGCTAAGTTGTGTTTTTCTTTTTCATTTCACAGGGTCCTTCTGGTCCTGTTGGTCCTGCTGGTGCTGTTGGCCCAAGAGGTCCTAGTGGCCCACAAGGCATTCGTGGCGATAAGGGAGAGCCCG
CircID chr7:94425750|94426459
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MAILVPLVLQVHLVLMAPWVLLANMETVVKL
Nucleotide Sequence CTGGCAATATTGGTCCCGTTGGTGCTGCAGGTGCACCTGGTCCTCATGGCCCCGTGGGTCCTGCTGGCAAACATGGAAACCGTGGTGAAACTGTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab