CircRNA Information

General Information
circRNA Basic Information
CircID chr7:94598775|94599723
Strand -
CircType Non-Repeat
Host Gene ENSG00000127990.15;
Algorism find_circ;CIRI2;DCC;
Sequence GGAAAAGAGAAACATGCAAACACCAGACATCCAACTGGTCCATCACAGTGCTATTCAGAAATCTACCAAGGAGCTTCGAGACATGTCCAAGAATAGAGAGATAGCATGGCCCCTGTCAACGCTTCCTGTGTTCCACCCTGTGACTGGGGAAATCATACCTCCTTTACACACAGACAACTATGATAGCACAAACATGCCATTGATGCAAACGCAGCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)
CircID chr7:94598775|94599723
ORF Type ORF1
Protein Length 67
Nucleotide Length 201
Protein Sequence MQTPDIQLVHHSAIQKSTKELRDMSKNREIAWPLSTLPVFHPVTGEIIPPLHTDNYDSTNMPLMQTQ
Nucleotide Sequence ATGCAAACACCAGACATCCAACTGGTCCATCACAGTGCTATTCAGAAATCTACCAAGGAGCTTCGAGACATGTCCAAGAATAGAGAGATAGCATGGCCCCTGTCAACGCTTCCTGTGTTCCACCCTGTGACTGGGGAAATCATACCTCCTTTACACACAGACAACTATGATAGCACAAACATGCCATTGATGCAAACGCAG

CircID chr7:94598775|94599723
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MISPVTGWNTGSVDRGHAISLFLDMSRSSLVDF*
Nucleotide Sequence ATGATTTCCCCAGTCACAGGGTGGAACACAGGAAGCGTTGACAGGGGCCATGCTATCTCTCTATTCTTGGACATGTCTCGAAGCTCCTTGGTAGATTTCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr7:94598775|94599723 U2AF2 6 7 0
chr7:94598775|94599723 MOV10 0 2 0
chr7:94598775|94599723 ELAVL1 5 4 1
chr7:94598775|94599723 FAM120A 1 0 0
chr7:94598775|94599723 PRPF8 1 0 0
chr7:94598775|94599723 CNBP 1 0 0
chr7:94598775|94599723 YTHDF1 0 1 0
chr7:94598775|94599723 UPF1 1 0 0
chr7:94598775|94599723 TAF15 1 1 0
chr7:94598775|94599723 FMR1 3 0 0
chr7:94598775|94599723 FUS 1 2 0
chr7:94598775|94599723 DGCR8 0 0 1
chr7:94598775|94599723 NOP58 0 0 2
chr7:94598775|94599723 SRSF3 0 1 0
chr7:94598775|94599723 ADAR 0 1 0
chr7:94598775|94599723 NOP56 1 1 0
chr7:94598775|94599723 SRSF9 1 0 0
chr7:94598775|94599723 DDX54 1 0 1
chr7:94598775|94599723 RBM10 2 0 0
chr7:94598775|94599723 TRA2A 1 0 0
chr7:94598775|94599723 HNRNPA1 0 1 0
chr7:94598775|94599723 ACIN1 0 0 1
chr7:94598775|94599723 LIN28B 2 0 0
chr7:94598775|94599723 LIN28A 1 0 1
chr7:94598775|94599723 RANGAP1 1 0 0
chr7:94598775|94599723 SND1 2 2 2
chr7:94598775|94599723 IGF2BP1 3 2 1
chr7:94598775|94599723 IGF2BP3 1 1 2
chr7:94598775|94599723 IGF2BP2 4 1 3
chr7:94598775|94599723 RBFOX2 1 1 0
chr7:94598775|94599723 RBM47 0 1 1
chr7:94598775|94599723 TIA1 1 0 0
chr7:94598775|94599723 TIAL1 1 0 0
chr7:94598775|94599723 DKC1 1 0 0
chr7:94598775|94599723 FBL 1 0 0
chr7:94598775|94599723 AGO1 1 0 0
chr7:94598775|94599723 EIF4A3 5 0 1
chr7:94598775|94599723 AGO2 2 3 3