CircRNA Information

General Information
circRNA Basic Information
CircID chr7:94665069|94665224
Strand -
CircType exon
Host Gene ENSG00000242265.4;
Algorism CIRI2;
Sequence CAGTGAGGTATTACTATGTCCAGAATGTGTACACTCCAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTTGACCCTCACATAGAAATGATACCTGGAGCACACAGTATTCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:94665069|94665224 hsa-miR-200b-5p 0 0 1
chr7:94665069|94665224 hsa-miR-200b-3p 0 0 1
chr7:94665069|94665224 hsa-miR-122-5p 0 0 1
chr7:94665069|94665224 hsa-miR-122-3p 0 0 1
chr7:94665069|94665224 hsa-miR-200c-5p 0 0 1
chr7:94665069|94665224 hsa-miR-200c-3p 0 0 1
chr7:94665069|94665224 hsa-miR-379-5p 0 0 1
chr7:94665069|94665224 hsa-miR-379-3p 0 0 1
chr7:94665069|94665224 hsa-miR-422a 0 0 1
chr7:94665069|94665224 hsa-miR-429 0 0 1
chr7:94665069|94665224 hsa-miR-892a 0 0 1
chr7:94665069|94665224 hsa-miR-1294 0 0 1
chr7:94665069|94665224 hsa-miR-1299 0 0 1
chr7:94665069|94665224 hsa-miR-1243 0 0 1
chr7:94665069|94665224 hsa-miR-875-5p 0 0 1
chr7:94665069|94665224 hsa-miR-378 0 0 1
chr7:94665069|94665224 hsa-miR-516b 0 0 1
chr7:94665069|94665224 hsa-miR-1182 1 0 0
chr7:94665069|94665224 hsa-miR-4643 0 1 0
chr7:94665069|94665224 hsa-miR-4710 1 0 0
chr7:94665069|94665224 hsa-miR-6863 0 1 0
chr7:94665069|94665224 hsa-miR-12119 1 0 0
chr7:94665069|94665224 hsa-miR-370-3p 1 0 0
chr7:94665069|94665224 hsa-miR-6734-5p 1 0 0
chr7:94665069|94665224 hsa-miR-6861-5p 0 1 0
chr7:94665069|94665224 hsa-miR-6804-5p 1 0 0
chr7:94665069|94665224 hsa-miR-1178-5p 0 1 0
chr7:94665069|94665224 hsa-miR-1226-5p 1 0 0
chr7:94665069|94665224 hsa-miR-7850-5p 0 1 0
chr7:94665069|94665224 hsa-miR-1911-3p 0 1 0
chr7:94665069|94665224 hsa-miR-598-5p 0 1 0
chr7:94665069|94665224 hsa-miR-3177-5p 0 1 0
chr7:94665069|94665224 hsa-miR-4520-2-3p 0 1 0
chr7:94665069|94665224 hsa-miR-4693-5p 0 1 0
chr7:94665069|94665224 hsa-miR-6803-5p 1 0 0
chr7:94665069|94665224 hsa-miR-6751-5p 1 0 0
chr7:94665069|94665224 hsa-miR-3085-5p 1 0 0
chr7:94665069|94665224 hsa-miR-3529-5p 0 1 0
chr7:94665069|94665224 hsa-miR-6817-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr7:94665069|94665224
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MVDPHIEMIPGAHSIPSGHVYSLSEPEMA
Nucleotide Sequence CTGGTTGACCCTCACATAGAAATGATACCTGGAGCACACAGTATTCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCA

CircID chr7:94665069|94665224
ORF Type ORF2
Protein Length 52
Nucleotide Length 156
Protein Sequence LPFQVRTVNTHVHWEYCVLQVSFLCEGQPGGDLGRRAHLLECTHSGHSNTSL
Nucleotide Sequence CTGCCATTTCAGGTTCGGACAGTGAATACACATGTCCACTGGGAATACTGTGTGCTCCAGGTATCATTTCTATGTGAGGGTCAACCAGGCGGTGATCTGGGTAGACGTGCTCATCTACTGGAGTGTACACATTCTGGACATAGTAATACCTCACTG

CircID chr7:94665069|94665224
ORF Type ORF3
Protein Length 41
Nucleotide Length 123
Protein Sequence MSTGNTVCSRYHFYVRVNQAVIWVDVLIYWSVHILDIVIPH
Nucleotide Sequence ATGTCCACTGGGAATACTGTGTGCTCCAGGTATCATTTCTATGTGAGGGTCAACCAGGCGGTGATCTGGGTAGACGTGCTCATCTACTGGAGTGTACACATTCTGGACATAGTAATACCTCAC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites