CircRNA Information

General Information
circRNA Basic Information
CircID chr7:98207232|98207380
Strand -
CircType exon
Host Gene ENSG00000164715.5;
Algorism CIRI2;
Sequence CTGGGGTGCTCTCCAGACCCGTGCAGGGGCCGCCTGGGGTACACGGAAGGAAGTTGAGTCCTAGTGCAAAATGCAGGCGGACGTTGCCAGAGAGTGCGCAGCAAATGACCTTCATTGCCAGTTCCACCCTACTCCTCTCATTTTTTATA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:98207232|98207380 hsa-miR-185-5p 0 0 1
chr7:98207232|98207380 hsa-miR-185-3p 0 0 1
chr7:98207232|98207380 hsa-miR-326 0 0 1
chr7:98207232|98207380 hsa-miR-493-5p 0 0 1
chr7:98207232|98207380 hsa-miR-493-3p 0 0 1
chr7:98207232|98207380 hsa-miR-507 0 0 1
chr7:98207232|98207380 hsa-miR-557 1 0 1
chr7:98207232|98207380 hsa-miR-579-5p 0 0 1
chr7:98207232|98207380 hsa-miR-579-3p 0 0 1
chr7:98207232|98207380 hsa-miR-330-5p 0 0 1
chr7:98207232|98207380 hsa-miR-450b-5p 0 0 1
chr7:98207232|98207380 hsa-miR-516b 0 0 1
chr7:98207232|98207380 hsa-miR-608 1 0 0
chr7:98207232|98207380 hsa-miR-765 1 0 0
chr7:98207232|98207380 hsa-miR-1293 1 0 0
chr7:98207232|98207380 hsa-miR-3916 1 0 0
chr7:98207232|98207380 hsa-miR-3937 0 1 0
chr7:98207232|98207380 hsa-miR-4487 1 0 0
chr7:98207232|98207380 hsa-miR-4515 1 0 0
chr7:98207232|98207380 hsa-miR-4648 0 1 0
chr7:98207232|98207380 hsa-miR-4651 1 0 0
chr7:98207232|98207380 hsa-miR-4706 1 0 0
chr7:98207232|98207380 hsa-miR-4739 1 0 0
chr7:98207232|98207380 hsa-miR-4784 1 0 0
chr7:98207232|98207380 hsa-miR-5194 1 0 0
chr7:98207232|98207380 hsa-miR-6745 1 0 0
chr7:98207232|98207380 hsa-miR-7703 1 0 0
chr7:98207232|98207380 hsa-miR-12115 1 0 0
chr7:98207232|98207380 hsa-miR-4433b-3p 1 1 0
chr7:98207232|98207380 hsa-miR-6734-5p 1 1 0
chr7:98207232|98207380 hsa-miR-6840-3p 1 0 0
chr7:98207232|98207380 hsa-miR-4433a-3p 0 1 0
chr7:98207232|98207380 hsa-miR-7106-5p 1 0 0
chr7:98207232|98207380 hsa-miR-6799-5p 1 0 0
chr7:98207232|98207380 hsa-miR-8071 1 0 0
chr7:98207232|98207380 hsa-miR-766-5p 1 0 0
chr7:98207232|98207380 hsa-miR-3192-5p 1 0 0
chr7:98207232|98207380 hsa-miR-6742-5p 1 0 0
chr7:98207232|98207380 hsa-miR-6871-5p 1 0 0
chr7:98207232|98207380 hsa-miR-6772-5p 1 0 0
chr7:98207232|98207380 hsa-miR-6796-5p 1 0 0
chr7:98207232|98207380 hsa-miR-6782-5p 1 0 0
chr7:98207232|98207380 hsa-miR-3191-5p 1 1 0
chr7:98207232|98207380 hsa-miR-877-5p 1 0 0
chr7:98207232|98207380 hsa-miR-149-3p 1 0 0
chr7:98207232|98207380 hsa-miR-6824-5p 1 0 0
chr7:98207232|98207380 hsa-miR-2277-5p 1 0 0
chr7:98207232|98207380 hsa-miR-541-5p 1 0 0
chr7:98207232|98207380 hsa-miR-6812-5p 1 0 0
chr7:98207232|98207380 hsa-miR-6737-5p 1 0 0
chr7:98207232|98207380 hsa-miR-6756-5p 1 1 0
chr7:98207232|98207380 hsa-miR-6819-5p 1 0 0
chr7:98207232|98207380 hsa-miR-11181-3p 1 0 0
chr7:98207232|98207380 hsa-miR-6763-5p 1 0 0
chr7:98207232|98207380 hsa-miR-6779-5p 1 0 0
chr7:98207232|98207380 hsa-miR-3620-5p 1 0 0
chr7:98207232|98207380 hsa-miR-4745-5p 1 0 0
chr7:98207232|98207380 hsa-miR-6738-5p 1 0 0
chr7:98207232|98207380 hsa-miR-6777-5p 1 0 0
chr7:98207232|98207380 hsa-miR-6889-5p 1 0 0
chr7:98207232|98207380 hsa-miR-939-5p 1 0 0
chr7:98207232|98207380 hsa-miR-4758-5p 1 0 0
chr7:98207232|98207380 hsa-miR-6856-5p 1 1 0
chr7:98207232|98207380 hsa-miR-9851-5p 1 0 0
chr7:98207232|98207380 hsa-miR-10392-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr7:98207232|98207380
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MQADVARECAANDLHCQFHPTPLIFY
Nucleotide Sequence ATGCAGGCGGACGTTGCCAGAGAGTGCGCAGCAAATGACCTTCATTGCCAGTTCCACCCTACTCCTCTCATTTTTTAT

CircID chr7:98207232|98207380
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MSPSAKCRRTLPESAQQMTFIASSTLLLSFFI
Nucleotide Sequence TTGAGTCCTAGTGCAAAATGCAGGCGGACGTTGCCAGAGAGTGCGCAGCAAATGACCTTCATTGCCAGTTCCACCCTACTCCTCTCATTTTTTATA

CircID chr7:98207232|98207380
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MLRTLWQRPPAFCTRTQLPSVYPRRPLHGSGEHP
Nucleotide Sequence TTGCTGCGCACTCTCTGGCAACGTCCGCCTGCATTTTGCACTAGGACTCAACTTCCTTCCGTGTACCCCAGGCGGCCCCTGCACGGGTCTGGAGAGCACCCC

CircID chr7:98207232|98207380
ORF Type ORF4
Protein Length 40
Nucleotide Length 120
Protein Sequence MAMKVICCALSGNVRLHFALGLNFLPCTPGGPCTGLESTP
Nucleotide Sequence CTGGCAATGAAGGTCATTTGCTGCGCACTCTCTGGCAACGTCCGCCTGCATTTTGCACTAGGACTCAACTTCCTTCCGTGTACCCCAGGCGGCCCCTGCACGGGTCTGGAGAGCACCCCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites