CircNet

General Information

circRNA Basic Information

CircID	chr7:98240851\|98243592
Strand	-
CircType	exon
Host Gene	ENSG00000205356.9;
Algorism	find_circ;CIRI2;DCC;
Sequence	ATCCCCTCGAAGGATGACCCCAAGGAGCTGCCCGACCCCTTCAACGACCTCTCTGTAGGGGGCTGGGAGATCACGGAGGAGCCTGTGGGCCGCCTGTCAGTGTGGGCTGTGTCTCTGCAGGGCAAGGTGTGGTACAGAGAGGACGTCAGCCACTCCAACCCCGAAGGGTCCTCCTGGTCCCTGCTGGACACCCCCGGGGAGGTGGTTCAGATCAGCTGTGGGCCCCACGACCTCCTGTGGGCCACACTCTGGGAGGGACAGGCCCTGGTCCGGGAAGGAATCAACAGGAGCAATCCCAAAGGAAGTTCCTGGTCCATCGTGGAGCCTCCTGGATCTGAAAACGGGGTCATGCACATCTCGGTGGGAGTCAGCGTGGTCTGGGCTGTCACCAAGGACTGGAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr7:98240851\|98243592	hsa-miR-134-3p	0	1	1
chr7:98240851\|98243592	hsa-miR-150-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr7:98240851\|98243592
ORF Type	ORF1
Protein Length	106
Nucleotide Length	318
Protein Sequence	VGRLSVWAVSLQGKVWYREDVSHSNPEGSSWSLLDTPGEVVQISCGPHDLLWATLWEGQALVREGINRSNPKGSSWSIVEPPGSENGVMHISVGVSVVWAVTKDWK
Nucleotide Sequence	GTGGGCCGCCTGTCAGTGTGGGCTGTGTCTCTGCAGGGCAAGGTGTGGTACAGAGAGGACGTCAGCCACTCCAACCCCGAAGGGTCCTCCTGGTCCCTGCTGGACACCCCCGGGGAGGTGGTTCAGATCAGCTGTGGGCCCCACGACCTCCTGTGGGCCACACTCTGGGAGGGACAGGCCCTGGTCCGGGAAGGAATCAACAGGAGCAATCCCAAAGGAAGTTCCTGGTCCATCGTGGAGCCTCCTGGATCTGAAAACGGGGTCATGCACATCTCGGTGGGAGTCAGCGTGGTCTGGGCTGTCACCAAGGACTGGAAG

CircID	chr7:98240851\|98243592
ORF Type	ORF2
Protein Length	50
Nucleotide Length	150
Protein Sequence	MCMTPFSDPGGSTMDQELPLGLLLLIPSRTRACPSQSVAHRRSWGPQLI*
Nucleotide Sequence	ATGTGCATGACCCCGTTTTCAGATCCAGGAGGCTCCACGATGGACCAGGAACTTCCTTTGGGATTGCTCCTGTTGATTCCTTCCCGGACCAGGGCCTGTCCCTCCCAGAGTGTGGCCCACAGGAGGTCGTGGGGCCCACAGCTGATCTGA

CircID	chr7:98240851\|98243592
ORF Type	ORF3
Protein Length	86
Nucleotide Length	258
Protein Sequence	VHDPVFRSRRLHDGPGTSFGIAPVDSFPDQGLSLPECGPQEVVGPTADLNHLPGGVQQGPGGPFGVGVADVLSVPHLALQRHSPH*
Nucleotide Sequence	GTGCATGACCCCGTTTTCAGATCCAGGAGGCTCCACGATGGACCAGGAACTTCCTTTGGGATTGCTCCTGTTGATTCCTTCCCGGACCAGGGCCTGTCCCTCCCAGAGTGTGGCCCACAGGAGGTCGTGGGGCCCACAGCTGATCTGAACCACCTCCCCGGGGGTGTCCAGCAGGGACCAGGAGGACCCTTCGGGGTTGGAGTGGCTGACGTCCTCTCTGTACCACACCTTGCCCTGCAGAGACACAGCCCACACTGA

CircID	chr7:98240851\|98243592
ORF Type	ORF4
Protein Length	79
Nucleotide Length	237
Protein Sequence	VGCVSAGQGVVQRGRQPLQPRRVLLVPAGHPRGGGSDQLWAPRPPVGHTLGGTGPGPGRNQQEQSQRKFLVHRGASWI*
Nucleotide Sequence	GTGGGCTGTGTCTCTGCAGGGCAAGGTGTGGTACAGAGAGGACGTCAGCCACTCCAACCCCGAAGGGTCCTCCTGGTCCCTGCTGGACACCCCCGGGGAGGTGGTTCAGATCAGCTGTGGGCCCCACGACCTCCTGTGGGCCACACTCTGGGAGGGACAGGCCCTGGTCCGGGAAGGAATCAACAGGAGCAATCCCAAAGGAAGTTCCTGGTCCATCGTGGAGCCTCCTGGATCTGA

CircID	chr7:98240851\|98243592
ORF Type	ORF5
Protein Length	63
Nucleotide Length	189
Protein Sequence	VSSRDQEDPSGLEWLTSSLYHTLPCRDTAHTDRRPTGSSVISQPPTERSLKGSGSSLGSSFEG
Nucleotide Sequence	GTGTCCAGCAGGGACCAGGAGGACCCTTCGGGGTTGGAGTGGCTGACGTCCTCTCTGTACCACACCTTGCCCTGCAGAGACACAGCCCACACTGACAGGCGGCCCACAGGCTCCTCCGTGATCTCCCAGCCCCCTACAGAGAGGTCGTTGAAGGGGTCGGGCAGCTCCTTGGGGTCATCCTTCGAGGGG

CircID	chr7:98240851\|98243592
ORF Type	ORF6
Protein Length	61
Nucleotide Length	183
Protein Sequence	VGPTTSCGPHSGRDRPWSGKESTGAIPKEVPGPSWSLLDLKTGSCTSRWESAWSGLSPRTG
Nucleotide Sequence	GTGGGCCCCACGACCTCCTGTGGGCCACACTCTGGGAGGGACAGGCCCTGGTCCGGGAAGGAATCAACAGGAGCAATCCCAAAGGAAGTTCCTGGTCCATCGTGGAGCCTCCTGGATCTGAAAACGGGGTCATGCACATCTCGGTGGGAGTCAGCGTGGTCTGGGCTGTCACCAAGGACTGGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr7:98240851\|98243592	U2AF2	0	29	0
chr7:98240851\|98243592	MOV10	0	2	0
chr7:98240851\|98243592	ELAVL1	2	28	1
chr7:98240851\|98243592	NCBP2	0	2	0
chr7:98240851\|98243592	SF3B4	1	9	0
chr7:98240851\|98243592	SF3B1	0	3	0
chr7:98240851\|98243592	PRPF8	2	1	0
chr7:98240851\|98243592	YTHDF1	0	1	0
chr7:98240851\|98243592	UPF1	1	2	0
chr7:98240851\|98243592	TAF15	0	5	0
chr7:98240851\|98243592	FMR1	0	1	2
chr7:98240851\|98243592	CPSF6	0	7	2
chr7:98240851\|98243592	NUDT21	0	4	1
chr7:98240851\|98243592	GPKOW	0	2	0
chr7:98240851\|98243592	CPSF3	0	0	1
chr7:98240851\|98243592	FUS	1	4	0
chr7:98240851\|98243592	DGCR8	1	0	0
chr7:98240851\|98243592	CPSF7	0	2	0
chr7:98240851\|98243592	SRSF1	2	7	6
chr7:98240851\|98243592	NOP58	0	2	1
chr7:98240851\|98243592	U2AF1	0	5	0
chr7:98240851\|98243592	EIF3A	0	1	0
chr7:98240851\|98243592	EIF3B	0	1	0
chr7:98240851\|98243592	KHSRP	0	1	0
chr7:98240851\|98243592	SRSF9	0	1	3
chr7:98240851\|98243592	DDX54	0	0	2
chr7:98240851\|98243592	EIF3G	0	1	0
chr7:98240851\|98243592	EFTUD2	0	1	0
chr7:98240851\|98243592	RBM15	0	2	0
chr7:98240851\|98243592	FIP1L1	0	2	0
chr7:98240851\|98243592	PTBP1	6	7	0
chr7:98240851\|98243592	HNRNPC	1	48	13
chr7:98240851\|98243592	DDX3X	0	3	0
chr7:98240851\|98243592	XRN2	0	1	0
chr7:98240851\|98243592	EIF3D	0	1	0
chr7:98240851\|98243592	LARP7	0	1	0
chr7:98240851\|98243592	SMNDC1	1	0	1
chr7:98240851\|98243592	HNRNPA1	6	10	0
chr7:98240851\|98243592	LIN28B	0	3	0
chr7:98240851\|98243592	FXR1	0	0	1
chr7:98240851\|98243592	FXR2	0	1	1
chr7:98240851\|98243592	RBM22	0	1	0
chr7:98240851\|98243592	SND1	0	0	1
chr7:98240851\|98243592	IGF2BP1	0	8	1
chr7:98240851\|98243592	IGF2BP3	1	1	0
chr7:98240851\|98243592	IGF2BP2	1	5	1
chr7:98240851\|98243592	TARDBP	0	13	0
chr7:98240851\|98243592	YTHDC1	0	6	0
chr7:98240851\|98243592	BUD13	2	2	3
chr7:98240851\|98243592	DDX42	0	3	0
chr7:98240851\|98243592	CSTF2T	1	8	0
chr7:98240851\|98243592	CSTF2	0	0	1
chr7:98240851\|98243592	RNF219	0	1	0
chr7:98240851\|98243592	YBX3	0	4	0
chr7:98240851\|98243592	WDR33	1	0	0
chr7:98240851\|98243592	AGO2	2	1	1
chr7:98240851\|98243592	ATXN2	0	2	0
chr7:98240851\|98243592	EWSR1	0	2	0
chr7:98240851\|98243592	EIF4A3	1	3	5
chr7:98240851\|98243592	FBL	0	0	1

CircRNA Information