CircRNA Information

General Information
circRNA Basic Information
CircID chr7:99564185|99564395
Strand -
CircType exon
Host Gene ENSG00000197343.9;
Algorism CIRI2;
Sequence CAGATATGTTTTGAACCCAGTTCATTCAGAAACCATGGTTGGTGGTCATCATCTACTTGTATTGTGAAAAACCAGAAATTCCAAATTCAGCTCTTCAGTTATGGTCTTTTCATATTATTTTAGAATGTGAAACTTATGCTGTGTGCCCCTCCTTTTATGTGGCGAACACAACCTGCCCCGTATGGTGCCTAACTCTCCTGTGAACCCTGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:99564185|99564395 hsa-miR-23a-5p 0 0 1
chr7:99564185|99564395 hsa-miR-23a-3p 0 0 1
chr7:99564185|99564395 hsa-miR-27a-5p 0 0 1
chr7:99564185|99564395 hsa-miR-27a-3p 0 0 1
chr7:99564185|99564395 hsa-miR-23b-5p 0 0 1
chr7:99564185|99564395 hsa-miR-23b-3p 0 0 1
chr7:99564185|99564395 hsa-miR-27b-5p 0 0 1
chr7:99564185|99564395 hsa-miR-27b-3p 0 0 1
chr7:99564185|99564395 hsa-miR-381-5p 0 0 1
chr7:99564185|99564395 hsa-miR-381-3p 0 0 1
chr7:99564185|99564395 hsa-miR-657 0 0 1
chr7:99564185|99564395 hsa-miR-1323 0 0 1
chr7:99564185|99564395 hsa-miR-300 0 0 1
chr7:99564185|99564395 hsa-miR-548o-3p 0 0 1
chr7:99564185|99564395 hsa-miR-1272 0 1 1
chr7:99564185|99564395 hsa-miR-513b-5p 0 0 1
chr7:99564185|99564395 hsa-miR-513b-3p 0 0 1
chr7:99564185|99564395 hsa-miR-548o 0 0 1
chr7:99564185|99564395 hsa-miR-486-3p 1 0 1
chr7:99564185|99564395 hsa-miR-767-5p 0 0 1
chr7:99564185|99564395 hsa-miR-423-5p 1 1 1
chr7:99564185|99564395 hsa-miR-513a-5p 0 0 1
chr7:99564185|99564395 hsa-miR-220c 0 0 1
chr7:99564185|99564395 hsa-miR-768-3p 0 0 1
chr7:99564185|99564395 hsa-miR-638 1 0 0
chr7:99564185|99564395 hsa-miR-663a 1 0 0
chr7:99564185|99564395 hsa-miR-1257 0 1 0
chr7:99564185|99564395 hsa-miR-3141 1 0 0
chr7:99564185|99564395 hsa-miR-3147 1 0 0
chr7:99564185|99564395 hsa-miR-4298 1 0 0
chr7:99564185|99564395 hsa-miR-4259 1 0 0
chr7:99564185|99564395 hsa-miR-3935 1 0 0
chr7:99564185|99564395 hsa-miR-4688 1 1 0
chr7:99564185|99564395 hsa-miR-4779 0 1 0
chr7:99564185|99564395 hsa-miR-5090 1 1 0
chr7:99564185|99564395 hsa-miR-5192 0 1 0
chr7:99564185|99564395 hsa-miR-4433a-3p 1 0 0
chr7:99564185|99564395 hsa-miR-125b-1-3p 1 0 0
chr7:99564185|99564395 hsa-miR-6861-5p 1 0 0
chr7:99564185|99564395 hsa-miR-6799-5p 1 0 0
chr7:99564185|99564395 hsa-miR-4722-5p 1 0 0
chr7:99564185|99564395 hsa-miR-593-5p 1 1 0
chr7:99564185|99564395 hsa-miR-6727-5p 1 0 0
chr7:99564185|99564395 hsa-miR-6871-5p 1 0 0
chr7:99564185|99564395 hsa-miR-6768-5p 1 0 0
chr7:99564185|99564395 hsa-miR-6823-5p 1 1 0
chr7:99564185|99564395 hsa-miR-877-5p 1 0 0
chr7:99564185|99564395 hsa-miR-744-5p 1 0 0
chr7:99564185|99564395 hsa-miR-6502-3p 0 1 0
chr7:99564185|99564395 hsa-miR-1207-5p 1 0 0
chr7:99564185|99564395 hsa-miR-6775-5p 1 0 0
chr7:99564185|99564395 hsa-miR-6743-5p 1 0 0
chr7:99564185|99564395 hsa-miR-6813-5p 1 0 0
chr7:99564185|99564395 hsa-miR-6779-5p 1 0 0
chr7:99564185|99564395 hsa-miR-6780a-5p 1 0 0
chr7:99564185|99564395 hsa-miR-6879-5p 1 0 0
chr7:99564185|99564395 hsa-miR-7111-5p 1 0 0
chr7:99564185|99564395 hsa-miR-4728-5p 1 0 0
chr7:99564185|99564395 hsa-miR-5189-5p 1 0 0
chr7:99564185|99564395 hsa-miR-10396b-5p 1 0 0
chr7:99564185|99564395 hsa-miR-1237-5p 1 0 0
chr7:99564185|99564395 hsa-miR-328-5p 1 0 0
chr7:99564185|99564395 hsa-miR-4685-5p 1 0 0
chr7:99564185|99564395 hsa-miR-4745-5p 1 0 0
chr7:99564185|99564395 hsa-miR-6738-5p 1 0 0
chr7:99564185|99564395 hsa-miR-6777-5p 1 0 0
chr7:99564185|99564395 hsa-miR-6858-5p 1 0 0
chr7:99564185|99564395 hsa-miR-6887-5p 1 0 0
chr7:99564185|99564395 hsa-miR-6885-5p 1 0 0
chr7:99564185|99564395 hsa-miR-939-5p 1 0 0
chr7:99564185|99564395 hsa-miR-6731-5p 1 0 0
chr7:99564185|99564395 hsa-miR-6891-5p 0 1 0
chr7:99564185|99564395 hsa-miR-3184-5p 1 1 0
chr7:99564185|99564395 hsa-miR-6762-5p 1 0 0
chr7:99564185|99564395 hsa-miR-10400-3p 1 0 0
chr7:99564185|99564395 hsa-miR-6837-5p 1 0 0
chr7:99564185|99564395 hsa-miR-9851-3p 1 0 0
chr7:99564185|99564395 hsa-miR-6764-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr7:99564185|99564395
ORF Type ORF1
Protein Length 54
Nucleotide Length 165
Protein Sequence MVVIIYLYCEKPEIPNSALQLWSFHIILECETYAVCPSFYVANTTCPVWCLTLL
Nucleotide Sequence TTGGTGGTCATCATCTACTTGTATTGTGAAAAACCAGAAATTCCAAATTCAGCTCTTCAGTTATGGTCTTTTCATATTATTTTAGAATGTGAAACTTATGCTGTGTGCCCCTCCTTTTATGTGGCGAACACAACCTGCCCCGTATGGTGCCTAACTCTCCTGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab