CircRNA Information

General Information
circRNA Basic Information
CircID chr8:101204764|101204953
Strand +
CircType exon
Host Gene ENSG00000120963.10;
Algorism CIRI2;
Sequence CTCACTGTGGGTGCGTTCCTCCTCTCCTCTCCCCAAAACGATGGTGTTAAAAGCTAGGGTCAGGATGTGGAGCGCTGCCTGGGCCTCTTCCTTTCCGATGGTTATGGAGAATGAGCCTACTTCCTGGACCCAAAATCCTTTTCTTCTGTTACTCATTTATGTTGGTTTTAAAAGGAGCTTTGGGGCAGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:101204764|101204953 hsa-miR-136-5p 0 0 1
chr8:101204764|101204953 hsa-miR-136-3p 0 0 1
chr8:101204764|101204953 hsa-miR-504-5p 0 0 1
chr8:101204764|101204953 hsa-miR-504-3p 0 0 1
chr8:101204764|101204953 hsa-miR-802 0 0 1
chr8:101204764|101204953 hsa-miR-665 0 0 1
chr8:101204764|101204953 hsa-miR-939-5p 0 0 1
chr8:101204764|101204953 hsa-miR-939-3p 0 0 1
chr8:101204764|101204953 hsa-miR-1290 0 1 1
chr8:101204764|101204953 hsa-miR-885-3p 0 0 1
chr8:101204764|101204953 hsa-miR-324-3p 0 0 1
chr8:101204764|101204953 hsa-miR-515-5p 0 0 1
chr8:101204764|101204953 hsa-miR-128 0 0 1
chr8:101204764|101204953 hsa-miR-194 0 0 1
chr8:101204764|101204953 hsa-miR-1538 1 0 0
chr8:101204764|101204953 hsa-miR-3175 1 1 0
chr8:101204764|101204953 hsa-miR-3610 1 1 0
chr8:101204764|101204953 hsa-miR-4673 0 1 0
chr8:101204764|101204953 hsa-miR-4692 0 1 0
chr8:101204764|101204953 hsa-miR-4739 1 0 0
chr8:101204764|101204953 hsa-miR-4784 0 1 0
chr8:101204764|101204953 hsa-miR-8085 0 1 0
chr8:101204764|101204953 hsa-miR-4747-3p 0 1 0
chr8:101204764|101204953 hsa-miR-18a-3p 0 1 0
chr8:101204764|101204953 hsa-miR-181c-3p 0 1 0
chr8:101204764|101204953 hsa-miR-1236-5p 1 1 0
chr8:101204764|101204953 hsa-miR-6089 1 0 0
chr8:101204764|101204953 hsa-miR-7847-3p 1 0 0
chr8:101204764|101204953 hsa-miR-6806-5p 1 0 0
chr8:101204764|101204953 hsa-miR-7109-5p 1 1 0
chr8:101204764|101204953 hsa-miR-6740-5p 0 1 0
chr8:101204764|101204953 hsa-miR-208a-5p 0 1 0
chr8:101204764|101204953 hsa-miR-6758-3p 0 1 0
chr8:101204764|101204953 hsa-miR-7158-5p 1 0 0
chr8:101204764|101204953 hsa-miR-18b-3p 0 1 0
chr8:101204764|101204953 hsa-miR-6812-5p 1 1 0
chr8:101204764|101204953 hsa-miR-1343-5p 1 0 0
chr8:101204764|101204953 hsa-miR-6756-5p 1 0 0
chr8:101204764|101204953 hsa-miR-1249-5p 1 0 0
chr8:101204764|101204953 hsa-miR-6763-5p 1 1 0
chr8:101204764|101204953 hsa-miR-4728-5p 1 1 0
chr8:101204764|101204953 hsa-miR-5196-5p 1 0 0
chr8:101204764|101204953 hsa-miR-6887-5p 1 0 0
chr8:101204764|101204953 hsa-miR-6731-5p 0 1 0
chr8:101204764|101204953 hsa-miR-6876-5p 0 1 0
chr8:101204764|101204953 hsa-miR-6859-5p 0 1 0
chr8:101204764|101204953 hsa-miR-21-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr8:101204764|101204953
ORF Type ORF1
Protein Length 62
Nucleotide Length 186
Protein Sequence MWVRSSSPLPKTMVLKARVRMWSAAWASSFPMVMENEPTSWTQNPFLLLLIYVGFKRSFGAE
Nucleotide Sequence CTGTGGGTGCGTTCCTCCTCTCCTCTCCCCAAAACGATGGTGTTAAAAGCTAGGGTCAGGATGTGGAGCGCTGCCTGGGCCTCTTCCTTTCCGATGGTTATGGAGAATGAGCCTACTTCCTGGACCCAAAATCCTTTTCTTCTGTTACTCATTTATGTTGGTTTTAAAAGGAGCTTTGGGGCAGAG

CircID chr8:101204764|101204953
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MPGPLPFRWLWRMSLLPGPKILFFCYSFMLVLKGALGQ
Nucleotide Sequence CTGCCTGGGCCTCTTCCTTTCCGATGGTTATGGAGAATGAGCCTACTTCCTGGACCCAAAATCCTTTTCTTCTGTTACTCATTTATGTTGGTTTTAAAAGGAGCTTTGGGGCAG

CircID chr8:101204764|101204953
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MGPGSRLILHNHRKGRGPGSAPHPDPSF
Nucleotide Sequence TTGGGTCCAGGAAGTAGGCTCATTCTCCATAACCATCGGAAAGGAAGAGGCCCAGGCAGCGCTCCACATCCTGACCCTAGCTTTTAA

CircID chr8:101204764|101204953
ORF Type ORF4
Protein Length 52
Nucleotide Length 156
Protein Sequence MSNRRKGFWVQEVGSFSITIGKEEAQAALHILTLAFNTIVLGRGEEERTHSE
Nucleotide Sequence ATGAGTAACAGAAGAAAAGGATTTTGGGTCCAGGAAGTAGGCTCATTCTCCATAACCATCGGAAAGGAAGAGGCCCAGGCAGCGCTCCACATCCTGACCCTAGCTTTTAACACCATCGTTTTGGGGAGAGGAGAGGAGGAACGCACCCACAGTGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites