CircNet

General Information

circRNA Basic Information

CircID	chr8:101543241\|101619697
Strand	+
CircType	exon
Host Gene	ENSG00000083307.10;
Algorism	find_circ;CIRI2;DCC;
Sequence	TAATAAAAGACTAGTGGCCTTAGTGCCCATGCCCAGTGACCCTCCATTCAATACCCGAAGAGCCTACACCAGTGAGGATGAAGCCTGGAAGTCATACTTGGAGAATCCCCTGACAGCAGCCACCAAGGCCATGATGAGCATTAATGGTGATGAGGACAGTGCTGCTGCCCTCGGCCTGCTCTATGACTACTACAAGGTTCCTCGAGACAAGAGGCTGCTGTCTGTAAGCAAAGCAAGTGACAGCCAAGAAGACCAGGAGAAAAGAGTGTGGTGATGGTGGTCTTCAGTGAAGACAAAAACAGAGATGAACAGCTCAAATACTGGAAATACTGGCACTCTCGGCAGCATACGGCGAAGCAGAGGGTCCTTGACATTGCCGATTACAAGGAGAGCTTTAATACGATTGGAAACATTGAAGAGATTGCATATAATGCTGTTTCCTTTACCTGGGACGTGAATGAAGAGGCGAAGATTTTCATCACCGTGAATTGCTTGAGCACAGATTTCTCCTCCCAAAAAGGGGTGAAAGGACTTCCTTTGATGATTCAGATTGACACATACAGTTATAACAATCGTAGCAATAAACCCATTCATAGAGCTTATTGCCAGATCAAGGTCTTCTGTGACAAA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr8:101543241\|101619697	hsa-miR-197-3p	1	1
chr8:101543241\|101619697	hsa-miR-16-1-3p	1	1
chr8:101543241\|101619697	hsa-miR-33a-3p	1	1

Target Genes

Note about Function Analysis:
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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr8:101543241\|101619697
ORF Type	ORF1
Protein Length	135
Nucleotide Length	405
Protein Sequence	MNGFIATIVITVCVNLNHQRKSFHPFLGGEICAQAIHGDENLRLFIHVPGKGNSIICNLFNVSNRIKALLVIGNVKDPLLRRMLPRVPVFPVFELFISVFVFTEDHHHHTLFSWSSWLSLALLTDSSLLSRGTL*
Nucleotide Sequence	ATGAATGGGTTTATTGCTACGATTGTTATAACTGTATGTGTCAATCTGAATCATCAAAGGAAGTCCTTTCACCCCTTTTTGGGAGGAGAAATCTGTGCTCAAGCAATTCACGGTGATGAAAATCTTCGCCTCTTCATTCACGTCCCAGGTAAAGGAAACAGCATTATATGCAATCTCTTCAATGTTTCCAATCGTATTAAAGCTCTCCTTGTAATCGGCAATGTCAAGGACCCTCTGCTTCGCCGTATGCTGCCGAGAGTGCCAGTATTTCCAGTATTTGAGCTGTTCATCTCTGTTTTTGTCTTCACTGAAGACCACCATCACCACACTCTTTTCTCCTGGTCTTCTTGGCTGTCACTTGCTTTGCTTACAGACAGCAGCCTCTTGTCTCGAGGAACCTTGTAG

CircID	chr8:101543241\|101619697
ORF Type	ORF2
Protein Length	119
Nucleotide Length	357
Protein Sequence	MVVFSEDKNRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGNIEEIAYNAVSFTWDVNEEAKIFITVNCLSTDFSSQKGVKGLPLMIQIDTYSYNNRSNKPIHRAYCQIKVFCDK
Nucleotide Sequence	ATGGTGGTCTTCAGTGAAGACAAAAACAGAGATGAACAGCTCAAATACTGGAAATACTGGCACTCTCGGCAGCATACGGCGAAGCAGAGGGTCCTTGACATTGCCGATTACAAGGAGAGCTTTAATACGATTGGAAACATTGAAGAGATTGCATATAATGCTGTTTCCTTTACCTGGGACGTGAATGAAGAGGCGAAGATTTTCATCACCGTGAATTGCTTGAGCACAGATTTCTCCTCCCAAAAAGGGGTGAAAGGACTTCCTTTGATGATTCAGATTGACACATACAGTTATAACAATCGTAGCAATAAACCCATTCATAGAGCTTATTGCCAGATCAAGGTCTTCTGTGACAAA

CircID	chr8:101543241\|101619697
ORF Type	ORF3
Protein Length	82
Nucleotide Length	246
Protein Sequence	MPSDPPFNTRRAYTSEDEAWKSYLENPLTAATKAMMSINGDEDSAAALGLLYDYYKVPRDKRLLSVSKASDSQEDQEKRVW*
Nucleotide Sequence	ATGCCCAGTGACCCTCCATTCAATACCCGAAGAGCCTACACCAGTGAGGATGAAGCCTGGAAGTCATACTTGGAGAATCCCCTGACAGCAGCCACCAAGGCCATGATGAGCATTAATGGTGATGAGGACAGTGCTGCTGCCCTCGGCCTGCTCTATGACTACTACAAGGTTCCTCGAGACAAGAGGCTGCTGTCTGTAAGCAAAGCAAGTGACAGCCAAGAAGACCAGGAGAAAAGAGTGTGGTGA

CircID	chr8:101543241\|101619697
ORF Type	ORF4
Protein Length	78
Nucleotide Length	234
Protein Sequence	MSRTLCFAVCCRECQYFQYLSCSSLFLSSLKTTITTLFSPGLLGCHLLCLQTAASCLEEPCSSHRAGRGQQHCPHHH*
Nucleotide Sequence	ATGTCAAGGACCCTCTGCTTCGCCGTATGCTGCCGAGAGTGCCAGTATTTCCAGTATTTGAGCTGTTCATCTCTGTTTTTGTCTTCACTGAAGACCACCATCACCACACTCTTTTCTCCTGGTCTTCTTGGCTGTCACTTGCTTTGCTTACAGACAGCAGCCTCTTGTCTCGAGGAACCTTGTAGTAGTCATAGAGCAGGCCGAGGGCAGCAGCACTGTCCTCATCACCATTAA

CircID	chr8:101543241\|101619697
ORF Type	ORF5
Protein Length	51
Nucleotide Length	153
Protein Sequence	MNSSNTGNTGTLGSIRRSRGSLTLPITRRALIRLETLKRLHIMLFPLPGT*
Nucleotide Sequence	ATGAACAGCTCAAATACTGGAAATACTGGCACTCTCGGCAGCATACGGCGAAGCAGAGGGTCCTTGACATTGCCGATTACAAGGAGAGCTTTAATACGATTGGAAACATTGAAGAGATTGCATATAATGCTGTTTCCTTTACCTGGGACGTGA

CircID	chr8:101543241\|101619697
ORF Type	ORF6
Protein Length	33
Nucleotide Length	99
Protein Sequence	MKIFASSFTSQVKETALYAISSMFPIVLKLSL*
Nucleotide Sequence	ATGAAAATCTTCGCCTCTTCATTCACGTCCCAGGTAAAGGAAACAGCATTATATGCAATCTCTTCAATGTTTCCAATCGTATTAAAGCTCTCCTTGTAA

CircID	chr8:101543241\|101619697
ORF Type	ORF7
Protein Length	52
Nucleotide Length	156
Protein Sequence	LAVTCFAYRQQPLVSRNLVVVIEQAEGSSTVLITINAHHGLGGCCQGILQV*
Nucleotide Sequence	TTGGCTGTCACTTGCTTTGCTTACAGACAGCAGCCTCTTGTCTCGAGGAACCTTGTAGTAGTCATAGAGCAGGCCGAGGGCAGCAGCACTGTCCTCATCACCATTAATGCTCATCATGGCCTTGGTGGCTGCTGTCAGGGGATTCTCCAAGTATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr8:101543241\|101619697	ELAVL1	0	1	0
chr8:101543241\|101619697	CSTF2T	0	0	3
chr8:101543241\|101619697	DDX54	0	2	17
chr8:101543241\|101619697	CNBP	2	0	0
chr8:101543241\|101619697	UPF1	0	1	0
chr8:101543241\|101619697	HNRNPD	0	1	0

CircRNA Information