CircRNA Information

General Information
circRNA Basic Information
CircID chr8:102206768|102206992
Strand +
CircType exon
Host Gene ENSG00000048392.10;
Algorism CIRI2;
Sequence ATGGTAGGGATTATTGAATCATTTCAAATTTATACCAGCCTGAATAGTGTACCAGCAATTGACTTAGGCTGTGTTTCTTTATGGTTTTAAAACTCTTGAGCTGTTATAAGAGATAGTTCTTTTAATGTGACTATGCAACATGATAGCCAATGGTGAGGGAAAAGGAGGTTTCTCTAGAAGAGTCTGATGAAAGGCCGGGAACCAAGGTTTTTGAGAAGTCTGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:102206768|102206992 hsa-miR-23a-5p 0 0 1
chr8:102206768|102206992 hsa-miR-23a-3p 0 0 1
chr8:102206768|102206992 hsa-miR-224-5p 0 0 1
chr8:102206768|102206992 hsa-miR-224-3p 0 0 1
chr8:102206768|102206992 hsa-miR-23b-5p 0 0 1
chr8:102206768|102206992 hsa-miR-23b-3p 0 0 1
chr8:102206768|102206992 hsa-miR-186-5p 0 0 1
chr8:102206768|102206992 hsa-miR-186-3p 0 0 1
chr8:102206768|102206992 hsa-miR-335-5p 0 0 1
chr8:102206768|102206992 hsa-miR-335-3p 0 0 1
chr8:102206768|102206992 hsa-miR-448 0 0 1
chr8:102206768|102206992 hsa-miR-484 0 0 1
chr8:102206768|102206992 hsa-miR-659-5p 0 0 1
chr8:102206768|102206992 hsa-miR-659-3p 0 0 1
chr8:102206768|102206992 hsa-miR-302f 0 0 1
chr8:102206768|102206992 hsa-miR-513c-5p 0 0 1
chr8:102206768|102206992 hsa-miR-513c-3p 0 0 1
chr8:102206768|102206992 hsa-miR-518d-5p 0 1 1
chr8:102206768|102206992 hsa-miR-519b-5p 0 1 1
chr8:102206768|102206992 hsa-miR-519c-5p 0 1 1
chr8:102206768|102206992 hsa-miR-520c-5p 0 1 1
chr8:102206768|102206992 hsa-miR-513a-3p 0 0 1
chr8:102206768|102206992 hsa-miR-548d-3p 0 0 1
chr8:102206768|102206992 hsa-miR-371-5p 0 0 1
chr8:102206768|102206992 hsa-miR-642 0 0 1
chr8:102206768|102206992 hsa-miR-153 0 0 1
chr8:102206768|102206992 hsa-miR-138 0 0 1
chr8:102206768|102206992 hsa-miR-526a 0 0 1
chr8:102206768|102206992 hsa-miR-203 0 0 1
chr8:102206768|102206992 hsa-miR-661 1 0 0
chr8:102206768|102206992 hsa-miR-153-3p 0 1 0
chr8:102206768|102206992 hsa-miR-10b-3p 0 1 0
chr8:102206768|102206992 hsa-miR-889-5p 1 0 0
chr8:102206768|102206992 hsa-miR-4446-5p 0 1 0
chr8:102206768|102206992 hsa-miR-520g-5p 0 1 0
chr8:102206768|102206992 hsa-miR-506-5p 0 1 0
chr8:102206768|102206992 hsa-miR-6735-5p 0 1 0
chr8:102206768|102206992 hsa-miR-518e-5p 0 1 0
chr8:102206768|102206992 hsa-miR-518f-5p 0 1 0
chr8:102206768|102206992 hsa-miR-519a-5p 0 1 0
chr8:102206768|102206992 hsa-miR-522-5p 0 1 0
chr8:102206768|102206992 hsa-miR-523-5p 0 1 0
chr8:102206768|102206992 hsa-miR-526a-5p 0 1 0
chr8:102206768|102206992 hsa-miR-3922-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:102206768|102206992
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MVGIIESFQIYTSLNSVPAIDLGCVSLWF
Nucleotide Sequence ATGGTAGGGATTATTGAATCATTTCAAATTTATACCAGCCTGAATAGTGTACCAGCAATTGACTTAGGCTGTGTTTCTTTATGGTTTTAA

CircID chr8:102206768|102206992
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MVREKEVSLEESDERPGTKVFEKSA
Nucleotide Sequence ATGGTGAGGGAAAAGGAGGTTTCTCTAGAAGAGTCTGATGAAAGGCCGGGAACCAAGGTTTTTGAGAAGTCTGCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites