CircRNA Information

General Information
circRNA Basic Information
CircID chr8:11786781|11786946
Strand +
CircType exon
Host Gene ENSG00000154328.14;
Algorism CIRI2;
Sequence AGGAGCTAGCTGGGCGCGGTGGCTCACACCCGTGGTCCCAACATTTTGGGAGACCAAGGTGGGAGGAATGCTTGAGTTGTAGGAGTTCAAACCAGCCTGGCAAATATGGCAAGACCCCATCTCTCTAAAAAGTAAACAAAAATCAGCCGAGCATCATATCACATGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:11786781|11786946 hsa-miR-150-5p 0 0 1
chr8:11786781|11786946 hsa-miR-150-3p 0 0 1
chr8:11786781|11786946 hsa-miR-431-5p 0 0 1
chr8:11786781|11786946 hsa-miR-431-3p 0 0 1
chr8:11786781|11786946 hsa-miR-190b-5p 0 0 1
chr8:11786781|11786946 hsa-miR-190b-3p 0 0 1
chr8:11786781|11786946 hsa-miR-1179 0 1 1
chr8:11786781|11786946 hsa-miR-1202 0 0 1
chr8:11786781|11786946 hsa-miR-1303 1 1 1
chr8:11786781|11786946 hsa-miR-1272 0 0 1
chr8:11786781|11786946 hsa-miR-1322 0 1 1
chr8:11786781|11786946 hsa-miR-423-3p 0 0 1
chr8:11786781|11786946 hsa-miR-532-3p 0 0 1
chr8:11786781|11786946 hsa-miR-615-5p 1 0 1
chr8:11786781|11786946 hsa-miR-193a-5p 0 0 1
chr8:11786781|11786946 hsa-miR-1224-3p 0 1 1
chr8:11786781|11786946 hsa-miR-409-3p 0 0 1
chr8:11786781|11786946 hsa-miR-1302 0 0 1
chr8:11786781|11786946 hsa-miR-1260 0 0 1
chr8:11786781|11786946 hsa-miR-1280 0 0 1
chr8:11786781|11786946 hsa-miR-190 0 0 1
chr8:11786781|11786946 hsa-miR-762 1 0 0
chr8:11786781|11786946 hsa-miR-3689e 0 1 0
chr8:11786781|11786946 hsa-miR-3689f 0 1 0
chr8:11786781|11786946 hsa-miR-8075 1 0 0
chr8:11786781|11786946 hsa-miR-92a-2-5p 0 1 0
chr8:11786781|11786946 hsa-miR-7155-5p 1 0 0
chr8:11786781|11786946 hsa-miR-6857-5p 1 0 0
chr8:11786781|11786946 hsa-miR-6757-5p 1 0 0
chr8:11786781|11786946 hsa-miR-6730-5p 1 0 0
chr8:11786781|11786946 hsa-miR-6875-3p 0 1 0
chr8:11786781|11786946 hsa-miR-6762-3p 1 0 0
chr8:11786781|11786946 hsa-miR-6793-5p 1 0 0
chr8:11786781|11786946 hsa-miR-193b-5p 1 0 0
chr8:11786781|11786946 hsa-miR-4756-3p 1 0 0
chr8:11786781|11786946 hsa-miR-1307-3p 1 0 0
chr8:11786781|11786946 hsa-miR-6813-3p 0 1 0
chr8:11786781|11786946 hsa-miR-503-3p 1 0 0
chr8:11786781|11786946 hsa-miR-1292-3p 0 1 0
chr8:11786781|11786946 hsa-miR-5001-5p 1 0 0
chr8:11786781|11786946 hsa-miR-6726-5p 1 0 0
chr8:11786781|11786946 hsa-miR-6737-5p 1 0 0
chr8:11786781|11786946 hsa-miR-5196-5p 1 0 0
chr8:11786781|11786946 hsa-miR-324-3p 1 1 0
chr8:11786781|11786946 hsa-miR-6762-5p 1 0 0
chr8:11786781|11786946 hsa-miR-3689a-5p 0 1 0
chr8:11786781|11786946 hsa-miR-3689b-5p 0 1 0
chr8:11786781|11786946 hsa-miR-155-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:11786781|11786946
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MPYLPGWFELLQLKHSSHLGLPKCWDHGCEPPRPASS
Nucleotide Sequence TTGCCATATTTGCCAGGCTGGTTTGAACTCCTACAACTCAAGCATTCCTCCCACCTTGGTCTCCCAAAATGTTGGGACCACGGGTGTGAGCCACCGCGCCCAGCTAGCTCC

CircID chr8:11786781|11786946
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MGSCHICQAGLNSYNSSIPPTLVSQNVGTTGVSHRAQLAP
Nucleotide Sequence ATGGGGTCTTGCCATATTTGCCAGGCTGGTTTGAACTCCTACAACTCAAGCATTCCTCCCACCTTGGTCTCCCAAAATGTTGGGACCACGGGTGTGAGCCACCGCGCCCAGCTAGCTCCT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites