CircRNA Information

General Information
circRNA Basic Information
CircID chr8:11843988|11844223
Strand +
CircType exon
Host Gene ENSG00000164733.19;
Algorism CIRI2;
Sequence TGCATGTTCTTGCGACTCTTGGGACTTCATCTTAACTTCTCGCTGCCCCAGCCATGTTTTCAACCATGGCATCCCTCCCCCAATTAGTTCCCTGTCATCCTCGTCAACCTTCTCTGTAAGTGCCTGGTAAGCTTGCCCTTGCTTAAGAACTCAAAACATAGCTGTGCTCTATTTTTTTGTTGTTGTTGTGACTGACAGAGTGAGATTCCGTCTCCCAGGCTGGAGTGCAGTGGCGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:11843988|11844223 hsa-miR-216a-5p 0 0 1
chr8:11843988|11844223 hsa-miR-216a-3p 0 0 1
chr8:11843988|11844223 hsa-miR-223-5p 0 0 1
chr8:11843988|11844223 hsa-miR-223-3p 0 0 1
chr8:11843988|11844223 hsa-miR-563 -10 0 1
chr8:11843988|11844223 hsa-miR-570-5p 0 0 1
chr8:11843988|11844223 hsa-miR-570-3p 0 0 1
chr8:11843988|11844223 hsa-miR-600 -8 0 1
chr8:11843988|11844223 hsa-miR-625-5p 0 0 1
chr8:11843988|11844223 hsa-miR-625-3p 0 0 1
chr8:11843988|11844223 hsa-miR-661 -13 0 1
chr8:11843988|11844223 hsa-miR-766-5p 0 0 1
chr8:11843988|11844223 hsa-miR-766-3p 0 0 1
chr8:11843988|11844223 hsa-miR-1275 -15 1 1
chr8:11843988|11844223 hsa-miR-486-3p -20 0 1
chr8:11843988|11844223 hsa-miR-885-3p -19 1 1
chr8:11843988|11844223 hsa-miR-508-5p -8 0 1
chr8:11843988|11844223 hsa-miR-4269 -14 1 0
chr8:11843988|11844223 hsa-miR-3689c -5 1 0
chr8:11843988|11844223 hsa-miR-5684 -8 1 0
chr8:11843988|11844223 hsa-miR-5698 -14 1 0
chr8:11843988|11844223 hsa-miR-5787 -28 1 0
chr8:11843988|11844223 hsa-miR-7703 -11 1 0
chr8:11843988|11844223 hsa-miR-6720-5p -13 1 0
chr8:11843988|11844223 hsa-miR-7851-3p -13 1 0
chr8:11843988|11844223 hsa-miR-6744-5p -20 1 0
chr8:11843988|11844223 hsa-miR-4755-3p -15 1 0
chr8:11843988|11844223 hsa-miR-3605-5p -17 1 0
chr8:11843988|11844223 hsa-miR-30b-3p -12 1 0
chr8:11843988|11844223 hsa-miR-30c-2-3p -12 1 0
chr8:11843988|11844223 hsa-miR-1911-3p -9 1 0
chr8:11843988|11844223 hsa-miR-6794-3p -5 1 0
chr8:11843988|11844223 hsa-miR-1285-5p -9 1 0
chr8:11843988|11844223 hsa-miR-2116-5p -7 1 0
chr8:11843988|11844223 hsa-miR-550b-3p -7 1 0
chr8:11843988|11844223 hsa-miR-5003-5p -9 1 0
chr8:11843988|11844223 hsa-miR-3689b-3p -5 1 0
chr8:11843988|11844223 hsa-miR-7107-5p -15 1 0
chr8:11843988|11844223 hsa-miR-1249-5p -12 1 0
chr8:11843988|11844223 hsa-miR-6797-5p -20 1 0
chr8:11843988|11844223 hsa-miR-7111-5p -17 1 0
chr8:11843988|11844223 hsa-miR-5196-5p -26 1 0
chr8:11843988|11844223 hsa-miR-3689a-3p -5 1 0
chr8:11843988|11844223 hsa-miR-6883-5p -17 1 0
chr8:11843988|11844223 hsa-miR-4723-5p -20 1 0
chr8:11843988|11844223 hsa-miR-30c-1-3p -14 1 0
chr8:11843988|11844223 hsa-miR-4665-5p -14 1 0
chr8:11843988|11844223 hsa-miR-6750-5p -21 1 0
chr8:11843988|11844223 hsa-miR-6785-5p -17 1 0
chr8:11843988|11844223 hsa-miR-6822-5p -19 1 0
chr8:11843988|11844223 hsa-miR-6807-3p -13 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr8:11843988|11844223
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MFLRLLGLHLNFSLPQPCFQPWHPSPN
Nucleotide Sequence ATGTTCTTGCGACTCTTGGGACTTCATCTTAACTTCTCGCTGCCCCAGCCATGTTTTCAACCATGGCATCCCTCCCCCAATTAG

CircID chr8:11843988|11844223
ORF Type ORF2
Protein Length 48
Nucleotide Length 147
Protein Sequence MHSSLGDGISLCQSQQQQKNRAQLCFEFLSKGKLTRHLQRRLTRMTGN
Nucleotide Sequence CTGCACTCCAGCCTGGGAGACGGAATCTCACTCTGTCAGTCACAACAACAACAAAAAAATAGAGCACAGCTATGTTTTGAGTTCTTAAGCAAGGGCAAGCTTACCAGGCACTTACAGAGAAGGTTGACGAGGATGACAGGGAACTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites