CircRNA Information

General Information
circRNA Basic Information
CircID chr8:11844906|11845056
Strand -
CircType exon
Host Gene ENSG00000164733.19;
Algorism CIRI2;
Sequence GCTCTGTGCTGGCAGCGGTGGCTCACATGGCCTGTCTGCACTGTAACCACAGGCTGGGATGTAGCCAGGACTTGGTCTCCTTGGAAGACAGGTCTGATGTTTGGCCAATCCAGTCCTTCAGACCCTGTCTGAAACTTGTATCTTACGTGAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:11844906|11845056 hsa-miR-148a-5p 0 0 1
chr8:11844906|11845056 hsa-miR-148a-3p 0 0 1
chr8:11844906|11845056 hsa-miR-221-5p 0 0 1
chr8:11844906|11845056 hsa-miR-221-3p 0 0 1
chr8:11844906|11845056 hsa-miR-222-5p 0 0 1
chr8:11844906|11845056 hsa-miR-222-3p 0 0 1
chr8:11844906|11845056 hsa-miR-152-5p 0 0 1
chr8:11844906|11845056 hsa-miR-152-3p 0 0 1
chr8:11844906|11845056 hsa-miR-381-5p 0 0 1
chr8:11844906|11845056 hsa-miR-381-3p 0 0 1
chr8:11844906|11845056 hsa-miR-148b-5p 0 0 1
chr8:11844906|11845056 hsa-miR-148b-3p 0 0 1
chr8:11844906|11845056 hsa-miR-588 0 0 1
chr8:11844906|11845056 hsa-miR-300 0 1 1
chr8:11844906|11845056 hsa-miR-1182 0 1 1
chr8:11844906|11845056 hsa-miR-1202 0 0 1
chr8:11844906|11845056 hsa-miR-1243 0 0 1
chr8:11844906|11845056 hsa-miR-1252-5p 0 0 1
chr8:11844906|11845056 hsa-miR-1252-3p 0 0 1
chr8:11844906|11845056 hsa-miR-1324 0 0 1
chr8:11844906|11845056 hsa-miR-409-5p 0 0 1
chr8:11844906|11845056 hsa-miR-582-5p 0 0 1
chr8:11844906|11845056 hsa-miR-762 1 0 0
chr8:11844906|11845056 hsa-miR-3166 0 1 0
chr8:11844906|11845056 hsa-miR-3169 0 1 0
chr8:11844906|11845056 hsa-miR-4252 1 0 0
chr8:11844906|11845056 hsa-miR-4421 0 1 0
chr8:11844906|11845056 hsa-miR-4428 0 1 0
chr8:11844906|11845056 hsa-miR-4515 0 1 0
chr8:11844906|11845056 hsa-miR-4683 0 1 0
chr8:11844906|11845056 hsa-miR-4794 0 1 0
chr8:11844906|11845056 hsa-miR-15a-3p 0 1 0
chr8:11844906|11845056 hsa-miR-6720-5p 1 0 0
chr8:11844906|11845056 hsa-miR-3926 0 1 0
chr8:11844906|11845056 hsa-miR-4786-5p 1 1 0
chr8:11844906|11845056 hsa-miR-6849-3p 1 1 0
chr8:11844906|11845056 hsa-miR-3691-3p 0 1 0
chr8:11844906|11845056 hsa-miR-6834-5p 0 1 0
chr8:11844906|11845056 hsa-miR-339-5p 0 1 0
chr8:11844906|11845056 hsa-miR-6811-3p 0 1 0
chr8:11844906|11845056 hsa-miR-6746-3p 1 1 0
chr8:11844906|11845056 hsa-miR-6838-3p 0 1 0
chr8:11844906|11845056 hsa-miR-4524b-3p 0 1 0
chr8:11844906|11845056 hsa-miR-5699-3p 0 1 0
chr8:11844906|11845056 hsa-miR-6839-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr8:11844906|11845056
ORF Type ORF1
Protein Length 42
Nucleotide Length 129
Protein Sequence MCWQRWLTWPVCTVTTGWDVARTWSPWKTGLMFGQSSPSDPV
Nucleotide Sequence CTGTGCTGGCAGCGGTGGCTCACATGGCCTGTCTGCACTGTAACCACAGGCTGGGATGTAGCCAGGACTTGGTCTCCTTGGAAGACAGGTCTGATGTTTGGCCAATCCAGTCCTTCAGACCCTGTCTGA

CircID chr8:11844906|11845056
ORF Type ORF2
Protein Length 47
Nucleotide Length 141
Protein Sequence MAAVAHMACLHCNHRLGCSQDLVSLEDRSDVWPIQSFRPCLKLVSYV
Nucleotide Sequence CTGGCAGCGGTGGCTCACATGGCCTGTCTGCACTGTAACCACAGGCTGGGATGTAGCCAGGACTTGGTCTCCTTGGAAGACAGGTCTGATGTTTGGCCAATCCAGTCCTTCAGACCCTGTCTGAAACTTGTATCTTACGTG

CircID chr8:11844906|11845056
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MKDWIGQTSDLSSKETKSWLHPSLWLQCRQAM
Nucleotide Sequence CTGAAGGACTGGATTGGCCAAACATCAGACCTGTCTTCCAAGGAGACCAAGTCCTGGCTACATCCCAGCCTGTGGTTACAGTGCAGACAGGCCATGTGA

CircID chr8:11844906|11845056
ORF Type ORF4
Protein Length 36
Nucleotide Length 108
Protein Sequence MAKHQTCLPRRPSPGYIPACGYSADRPCEPPLPAQS
Nucleotide Sequence TTGGCCAAACATCAGACCTGTCTTCCAAGGAGACCAAGTCCTGGCTACATCCCAGCCTGTGGTTACAGTGCAGACAGGCCATGTGAGCCACCGCTGCCAGCACAGAGC

CircID chr8:11844906|11845056
ORF Type ORF5
Protein Length 37
Nucleotide Length 111
Protein Sequence MDWPNIRPVFQGDQVLATSQPVVTVQTGHVSHRCQHR
Nucleotide Sequence CTGGATTGGCCAAACATCAGACCTGTCTTCCAAGGAGACCAAGTCCTGGCTACATCCCAGCCTGTGGTTACAGTGCAGACAGGCCATGTGAGCCACCGCTGCCAGCACAGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites