CircRNA Information

General Information
circRNA Basic Information
CircID chr8:123208720|123209021
Strand +
CircType exon
Host Gene ENSG00000147689.15;
Algorism CIRI2;
Sequence CCACCACAGGGCTGGCCAACCCTCCTCTATGCTCTCTCTCTTTTTTTTTTTTTTTTCTGTGACGGAGTCTTGCTTTGTTGCCCATGCTGGAGTGCAGTGATGCAATCTCAGCTCATTGCAACCTCTGCTTCCTGGGTTCAAGCAATTCTCCTGTCTCAGCCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATATTGGTCAGGCTGGTCTCGAGACCAGGTAATCCACCTGATCTCAGGTAATCCAACCACCTTGGCATCCCAAAGTTCTGGGATTACAGGCATGAGCCACCACGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:123208720|123209021 hsa-miR-558 0 0 1
chr8:123208720|123209021 hsa-miR-588 0 0 1
chr8:123208720|123209021 hsa-miR-619-5p 0 0 1
chr8:123208720|123209021 hsa-miR-619-3p 0 0 1
chr8:123208720|123209021 hsa-miR-766-5p 0 0 1
chr8:123208720|123209021 hsa-miR-766-3p 0 0 1
chr8:123208720|123209021 hsa-miR-877-5p 0 0 1
chr8:123208720|123209021 hsa-miR-877-3p 0 0 1
chr8:123208720|123209021 hsa-miR-302f 0 0 1
chr8:123208720|123209021 hsa-miR-125a-3p 0 0 1
chr8:123208720|123209021 hsa-miR-296-3p 0 0 1
chr8:123208720|123209021 hsa-miR-146b-3p 0 0 1
chr8:123208720|123209021 hsa-miR-330-3p 0 1 1
chr8:123208720|123209021 hsa-miR-508-5p 0 1 1
chr8:123208720|123209021 hsa-miR-876-3p 0 0 1
chr8:123208720|123209021 hsa-miR-516a-5p 0 0 1
chr8:123208720|123209021 hsa-miR-556-5p 0 0 1
chr8:123208720|123209021 hsa-miR-338-3p 0 0 1
chr8:123208720|123209021 hsa-miR-769-3p 0 0 1
chr8:123208720|123209021 hsa-miR-450b-3p 0 0 1
chr8:123208720|123209021 hsa-miR-548c-3p 0 0 1
chr8:123208720|123209021 hsa-miR-24 0 0 1
chr8:123208720|123209021 hsa-miR-658 1 0 0
chr8:123208720|123209021 hsa-miR-665 0 1 0
chr8:123208720|123209021 hsa-miR-711 0 1 0
chr8:123208720|123209021 hsa-miR-1273c 0 1 0
chr8:123208720|123209021 hsa-miR-4298 1 1 0
chr8:123208720|123209021 hsa-miR-3916 1 0 0
chr8:123208720|123209021 hsa-miR-3945 1 1 0
chr8:123208720|123209021 hsa-miR-4428 0 1 0
chr8:123208720|123209021 hsa-miR-4507 1 0 0
chr8:123208720|123209021 hsa-miR-4651 1 0 0
chr8:123208720|123209021 hsa-miR-4656 1 1 0
chr8:123208720|123209021 hsa-miR-4739 1 0 0
chr8:123208720|123209021 hsa-miR-5684 0 1 0
chr8:123208720|123209021 hsa-miR-5739 1 0 0
chr8:123208720|123209021 hsa-miR-6086 0 1 0
chr8:123208720|123209021 hsa-miR-6127 1 0 0
chr8:123208720|123209021 hsa-miR-6133 1 0 0
chr8:123208720|123209021 hsa-miR-7703 0 1 0
chr8:123208720|123209021 hsa-miR-8056 0 1 0
chr8:123208720|123209021 hsa-miR-8085 1 0 0
chr8:123208720|123209021 hsa-miR-12122 0 1 0
chr8:123208720|123209021 hsa-miR-12127 0 1 0
chr8:123208720|123209021 hsa-miR-31-5p 0 1 0
chr8:123208720|123209021 hsa-miR-6840-3p 1 1 0
chr8:123208720|123209021 hsa-miR-6825-5p 1 0 0
chr8:123208720|123209021 hsa-miR-6894-5p 1 0 0
chr8:123208720|123209021 hsa-miR-6804-5p 1 0 0
chr8:123208720|123209021 hsa-miR-4786-5p 0 1 0
chr8:123208720|123209021 hsa-miR-6873-5p 0 1 0
chr8:123208720|123209021 hsa-miR-6880-5p 1 0 0
chr8:123208720|123209021 hsa-miR-4722-5p 1 0 0
chr8:123208720|123209021 hsa-miR-185-3p 1 0 0
chr8:123208720|123209021 hsa-miR-3194-5p 0 1 0
chr8:123208720|123209021 hsa-miR-6821-5p 0 1 0
chr8:123208720|123209021 hsa-miR-1226-5p 1 0 0
chr8:123208720|123209021 hsa-miR-5004-3p 0 1 0
chr8:123208720|123209021 hsa-miR-6514-3p 0 1 0
chr8:123208720|123209021 hsa-miR-149-3p 1 0 0
chr8:123208720|123209021 hsa-miR-6824-5p 1 1 0
chr8:123208720|123209021 hsa-miR-7112-3p 0 1 0
chr8:123208720|123209021 hsa-miR-4761-5p 0 1 0
chr8:123208720|123209021 hsa-miR-4524a-3p 0 1 0
chr8:123208720|123209021 hsa-miR-6847-3p 0 1 0
chr8:123208720|123209021 hsa-miR-219b-3p 0 1 0
chr8:123208720|123209021 hsa-miR-6812-5p 1 0 0
chr8:123208720|123209021 hsa-miR-6816-5p 1 0 0
chr8:123208720|123209021 hsa-miR-1343-5p 1 0 0
chr8:123208720|123209021 hsa-miR-6851-5p 1 0 0
chr8:123208720|123209021 hsa-miR-11181-3p 1 0 0
chr8:123208720|123209021 hsa-miR-6779-5p 1 0 0
chr8:123208720|123209021 hsa-miR-4728-5p 1 0 0
chr8:123208720|123209021 hsa-miR-6858-5p 1 0 0
chr8:123208720|123209021 hsa-miR-6831-5p 1 0 0
chr8:123208720|123209021 hsa-miR-3940-5p 1 0 0
chr8:123208720|123209021 hsa-miR-6731-5p 1 0 0
chr8:123208720|123209021 hsa-miR-6856-5p 1 0 0
chr8:123208720|123209021 hsa-miR-1285-3p 0 1 0
chr8:123208720|123209021 hsa-miR-7843-5p 1 0 0
chr8:123208720|123209021 hsa-miR-377-5p 0 1 0
chr8:123208720|123209021 hsa-miR-6848-3p 0 1 0
chr8:123208720|123209021 hsa-miR-1234-3p 1 0 0
chr8:123208720|123209021 hsa-miR-6827-3p 0 1 0
chr8:123208720|123209021 hsa-miR-6807-3p 0 1 0
chr8:123208720|123209021 hsa-miR-6771-3p 0 1 0
chr8:123208720|123209021 hsa-miR-9902 0 1 0
chr8:123208720|123209021 hsa-miR-367-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr8:123208720|123209021
ORF Type ORF1
Protein Length 77
Nucleotide Length 231
Protein Sequence MLCCPCWSAVMQSQLIATSASWVQAILLSQPNFCIFSRDGVSPYWSGWSRDQVIHLISGNPTTLASQSSGITGMSHH
Nucleotide Sequence TTGCTTTGTTGCCCATGCTGGAGTGCAGTGATGCAATCTCAGCTCATTGCAACCTCTGCTTCCTGGGTTCAAGCAATTCTCCTGTCTCAGCCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATATTGGTCAGGCTGGTCTCGAGACCAGGTAATCCACCTGATCTCAGGTAATCCAACCACCTTGGCATCCCAAAGTTCTGGGATTACAGGCATGAGCCACCAC
CircID chr8:123208720|123209021
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MQPLLPGFKQFSCLSLIFVFLVETGFHHIGQAGLETR
Nucleotide Sequence TTGCAACCTCTGCTTCCTGGGTTCAAGCAATTCTCCTGTCTCAGCCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATATTGGTCAGGCTGGTCTCGAGACCAGGTAA
CircID chr8:123208720|123209021
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MLPMLECSDAISAHCNLCFLGSSNSPVSA
Nucleotide Sequence TTGTTGCCCATGCTGGAGTGCAGTGATGCAATCTCAGCTCATTGCAACCTCTGCTTCCTGGGTTCAAGCAATTCTCCTGTCTCAGCCTAA
CircID chr8:123208720|123209021
ORF Type ORF4
Protein Length 44
Nucleotide Length 135
Protein Sequence MPVIPELWDAKVVGLPEIRWITWSRDQPDQYGETPSLLKIQKLG
Nucleotide Sequence ATGCCTGTAATCCCAGAACTTTGGGATGCCAAGGTGGTTGGATTACCTGAGATCAGGTGGATTACCTGGTCTCGAGACCAGCCTGACCAATATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGGCTGA
CircID chr8:123208720|123209021
ORF Type ORF5
Protein Length 29
Nucleotide Length 90
Protein Sequence MPRWLDYLRSGGLPGLETSLTNMVKPRLY
Nucleotide Sequence ATGCCAAGGTGGTTGGATTACCTGAGATCAGGTGGATTACCTGGTCTCGAGACCAGCCTGACCAATATGGTGAAACCCCGTCTCTACTAA
CircID chr8:123208720|123209021
ORF Type ORF6
Protein Length 32
Nucleotide Length 96
Protein Sequence MHSSMGNKARLRHRKKKKKEREHRGGLASPVV
Nucleotide Sequence CTGCACTCCAGCATGGGCAACAAAGCAAGACTCCGTCACAGAAAAAAAAAAAAAAAAGAGAGAGAGCATAGAGGAGGGTTGGCCAGCCCTGTGGTG
CircID chr8:123208720|123209021
ORF Type ORF7
Protein Length 53
Nucleotide Length 159
Protein Sequence MRQENCLNPGSRGCNELRLHHCTPAWATKQDSVTEKKKKKRESIEEGWPALWW
Nucleotide Sequence CTGAGACAGGAGAATTGCTTGAACCCAGGAAGCAGAGGTTGCAATGAGCTGAGATTGCATCACTGCACTCCAGCATGGGCAACAAAGCAAGACTCCGTCACAGAAAAAAAAAAAAAAAAGAGAGAGAGCATAGAGGAGGGTTGGCCAGCCCTGTGGTGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab