CircNet

General Information

circRNA Basic Information

CircID	chr8:123226500\|123231757
Strand	-
CircType	exon
Host Gene	ENSG00000189376.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAAAATAAAGCAACCAACACAGACCATTTAACCACGGTACTCTACCTCCAGCTTGCTATTTGTTCAAGTTTGCAGAACTTGGAGAAAACAATTTTCTGCCTGCAGAAACTGATTTCTTTGCATCCTTTTAATCCTTGGAACTGGGGCAAATTGGCAGAGGCTTACCTGAATCTGGGGCCAGCTCTTTCAGCAGCACTTGCGTCATCTCAGAAACAGCACAGTTTCACCTCAAGTGACAAAACTATCAAATCCTTCTTTCCACACTCAGGAAAAGACTGTCTTTTGTGTTTTCCTGAAACCTTGCCTGAGAGCTCTTTATTTTCTGTGGAAGCGAATAGCAGTAATAGCCAGAAAAATGAGAAAGCTCTGACAAATATCCAAAACTGTATGGCAGAAAAGAGAGAAACAGTGTTGATAGAGACTCAGCTGAAAGCATGTGCCTCTTTTATACGAACCAGGCTTCTGCTTCAGTTTACCCAACCTCAGCAAACATCGTTTGCTTTGGAGAGGAACTTAAGGACTCAGCAGGAAATTGAAGATAAAATGAAAGGGTTCAGCTTCAAAGAAGACACTTTGCTGTTGATAGCTGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr8:123226500\|123231757	hsa-miR-29a-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr8:123226500\|123231757
ORF Type	ORF1
Protein Length	174
Nucleotide Length	522
Protein Sequence	LQNLEKTIFCLQKLISLHPFNPWNWGKLAEAYLNLGPALSAALASSQKQHSFTSSDKTIKSFFPHSGKDCLLCFPETLPESSLFSVEANSSNSQKNEKALTNIQNCMAEKRETVLIETQLKACASFIRTRLLLQFTQPQQTSFALERNLRTQQEIEDKMKGFSFKEDTLLLIAE
Nucleotide Sequence	TTGCAGAACTTGGAGAAAACAATTTTCTGCCTGCAGAAACTGATTTCTTTGCATCCTTTTAATCCTTGGAACTGGGGCAAATTGGCAGAGGCTTACCTGAATCTGGGGCCAGCTCTTTCAGCAGCACTTGCGTCATCTCAGAAACAGCACAGTTTCACCTCAAGTGACAAAACTATCAAATCCTTCTTTCCACACTCAGGAAAAGACTGTCTTTTGTGTTTTCCTGAAACCTTGCCTGAGAGCTCTTTATTTTCTGTGGAAGCGAATAGCAGTAATAGCCAGAAAAATGAGAAAGCTCTGACAAATATCCAAAACTGTATGGCAGAAAAGAGAGAAACAGTGTTGATAGAGACTCAGCTGAAAGCATGTGCCTCTTTTATACGAACCAGGCTTCTGCTTCAGTTTACCCAACCTCAGCAAACATCGTTTGCTTTGGAGAGGAACTTAAGGACTCAGCAGGAAATTGAAGATAAAATGAAAGGGTTCAGCTTCAAAGAAGACACTTTGCTGTTGATAGCTGAG

CircID	chr8:123226500\|123231757
ORF Type	ORF2
Protein Length	64
Nucleotide Length	192
Protein Sequence	MLSAESLSTLFLSFLPYSFGYLSELSHFSGYYCYSLPQKIKSSQARFQENTKDSLFLSVERRI*
Nucleotide Sequence	ATGCTTTCAGCTGAGTCTCTATCAACACTGTTTCTCTCTTTTCTGCCATACAGTTTTGGATATTTGTCAGAGCTTTCTCATTTTTCTGGCTATTACTGCTATTCGCTTCCACAGAAAATAAAGAGCTCTCAGGCAAGGTTTCAGGAAAACACAAAAGACAGTCTTTTCCTGAGTGTGGAAAGAAGGATTTGA

CircID	chr8:123226500\|123231757
ORF Type	ORF3
Protein Length	34
Nucleotide Length	102
Protein Sequence	MCLFYTNQASASVYPTSANIVCFGEELKDSAGN*
Nucleotide Sequence	ATGTGCCTCTTTTATACGAACCAGGCTTCTGCTTCAGTTTACCCAACCTCAGCAAACATCGTTTGCTTTGGAGAGGAACTTAAGGACTCAGCAGGAAATTGA

CircID	chr8:123226500\|123231757
ORF Type	ORF4
Protein Length	58
Nucleotide Length	174
Protein Sequence	LLRLGKLKQKPGSYKRGTCFQLSLYQHCFSLFCHTVLDICQSFLIFLAITAIRFHRK*
Nucleotide Sequence	TTGCTGAGGTTGGGTAAACTGAAGCAGAAGCCTGGTTCGTATAAAAGAGGCACATGCTTTCAGCTGAGTCTCTATCAACACTGTTTCTCTCTTTTCTGCCATACAGTTTTGGATATTTGTCAGAGCTTTCTCATTTTTCTGGCTATTACTGCTATTCGCTTCCACAGAAAATAA

CircID	chr8:123226500\|123231757
ORF Type	ORF5
Protein Length	58
Nucleotide Length	174
Protein Sequence	LRHLRNSTVSPQVTKLSNPSFHTQEKTVFCVFLKPCLRALYFLWKRIAVIARKMRKL*
Nucleotide Sequence	TTGCGTCATCTCAGAAACAGCACAGTTTCACCTCAAGTGACAAAACTATCAAATCCTTCTTTCCACACTCAGGAAAAGACTGTCTTTTGTGTTTTCCTGAAACCTTGCCTGAGAGCTCTTTATTTTCTGTGGAAGCGAATAGCAGTAATAGCCAGAAAAATGAGAAAGCTCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr8:123226500\|123231757	NOP56	3	2	2
chr8:123226500\|123231757	MOV10	0	4	1
chr8:123226500\|123231757	ELAVL1	4	6	2
chr8:123226500\|123231757	CELF2	2	0	1
chr8:123226500\|123231757	PRPF8	0	2	0
chr8:123226500\|123231757	YTHDF1	0	1	1
chr8:123226500\|123231757	SRSF10	1	0	0
chr8:123226500\|123231757	TNRC6A	0	1	0
chr8:123226500\|123231757	FMR1	0	1	2
chr8:123226500\|123231757	FUS	1	1	0
chr8:123226500\|123231757	NOP58	2	2	3
chr8:123226500\|123231757	SRSF3	1	0	0
chr8:123226500\|123231757	U2AF1	1	1	0
chr8:123226500\|123231757	U2AF2	7	8	5
chr8:123226500\|123231757	SRSF9	0	1	0
chr8:123226500\|123231757	DDX54	5	2	12
chr8:123226500\|123231757	RBM10	1	1	0
chr8:123226500\|123231757	FIP1L1	0	1	0
chr8:123226500\|123231757	PTBP1	1	1	1
chr8:123226500\|123231757	HNRNPC	1	10	0
chr8:123226500\|123231757	DHX9	2	0	0
chr8:123226500\|123231757	LARP4B	0	1	1
chr8:123226500\|123231757	RANGAP1	0	0	1
chr8:123226500\|123231757	IGF2BP1	0	0	3
chr8:123226500\|123231757	IGF2BP3	0	1	2
chr8:123226500\|123231757	IGF2BP2	2	2	5
chr8:123226500\|123231757	NPM1	0	1	0
chr8:123226500\|123231757	TARDBP	0	3	0
chr8:123226500\|123231757	BUD13	0	0	2
chr8:123226500\|123231757	RTCB	0	0	1
chr8:123226500\|123231757	CSTF2T	1	0	3
chr8:123226500\|123231757	RBM27	0	1	0
chr8:123226500\|123231757	AGO2	0	2	9
chr8:123226500\|123231757	AGO1	0	0	1
chr8:123226500\|123231757	EIF4A3	5	3	7
chr8:123226500\|123231757	FBL	1	2	4

CircRNA Information