CircRNA Information

General Information
circRNA Basic Information
CircID chr8:123502434|123502761
Strand -
CircType exon
Host Gene ENSG00000156804.6;
Algorism CIRI2;
Sequence GGCTTTTGTTTTGTTTTGTTTTGTTTTGGAGACAGGCTGGAGTGCAGTGGCACAATCATAGCTCACTGCAAACCTCAGACTCCTGGGCTCAAGCAATCCTCCCCTGGGACTGTTTTAAGTTGGCCTTCTTTTCCCCCAAATGAGCTACAACATGACAGGAAAAAAGGAACATGTGCTTTTGGGTTGTTCTGGTGAACAGATAACTCTAAGGAGGGCCCTGTTTGCCTGAAAAGGAAGTGTGAAACCAGAGGATTGCCTCCAATATCCCTTTCCATTTTAAATCACTTTTTATAGTGATGAAAACACTTACGAGAAAAACAGACACTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:123502434|123502761 hsa-miR-197-5p 0 0 1
chr8:123502434|123502761 hsa-miR-197-3p 0 0 1
chr8:123502434|123502761 hsa-miR-212-5p 0 0 1
chr8:123502434|123502761 hsa-miR-212-3p 0 0 1
chr8:123502434|123502761 hsa-miR-132-5p 0 0 1
chr8:123502434|123502761 hsa-miR-132-3p 0 0 1
chr8:123502434|123502761 hsa-miR-377-5p 0 0 1
chr8:123502434|123502761 hsa-miR-377-3p 0 0 1
chr8:123502434|123502761 hsa-miR-579-5p 0 0 1
chr8:123502434|123502761 hsa-miR-579-3p 0 0 1
chr8:123502434|123502761 hsa-miR-595 0 0 1
chr8:123502434|123502761 hsa-miR-610 0 0 1
chr8:123502434|123502761 hsa-miR-625-5p 0 0 1
chr8:123502434|123502761 hsa-miR-625-3p 0 0 1
chr8:123502434|123502761 hsa-miR-650 0 1 1
chr8:123502434|123502761 hsa-miR-766-5p 0 0 1
chr8:123502434|123502761 hsa-miR-766-3p 0 0 1
chr8:123502434|123502761 hsa-miR-665 0 1 1
chr8:123502434|123502761 hsa-miR-1226-5p 0 0 1
chr8:123502434|123502761 hsa-miR-1226-3p 0 0 1
chr8:123502434|123502761 hsa-miR-1227-5p 0 0 1
chr8:123502434|123502761 hsa-miR-1227-3p 0 0 1
chr8:123502434|123502761 hsa-miR-1275 1 1 1
chr8:123502434|123502761 hsa-miR-1225-3p 0 0 1
chr8:123502434|123502761 hsa-miR-508-5p 0 0 1
chr8:123502434|123502761 hsa-miR-34c-3p 0 0 1
chr8:123502434|123502761 hsa-miR-508-3p 0 0 1
chr8:123502434|123502761 hsa-miR-515-5p 0 1 1
chr8:123502434|123502761 hsa-miR-1233 0 0 1
chr8:123502434|123502761 hsa-miR-768-5p 0 0 1
chr8:123502434|123502761 hsa-miR-219-5p 0 0 1
chr8:123502434|123502761 hsa-miR-1202 1 0 0
chr8:123502434|123502761 hsa-miR-1253 0 1 0
chr8:123502434|123502761 hsa-miR-3132 1 0 0
chr8:123502434|123502761 hsa-miR-3135a 1 0 0
chr8:123502434|123502761 hsa-miR-3154 1 0 0
chr8:123502434|123502761 hsa-miR-4271 1 0 0
chr8:123502434|123502761 hsa-miR-4421 1 1 0
chr8:123502434|123502761 hsa-miR-4449 1 0 0
chr8:123502434|123502761 hsa-miR-4739 1 0 0
chr8:123502434|123502761 hsa-miR-4748 0 1 0
chr8:123502434|123502761 hsa-miR-5572 1 0 0
chr8:123502434|123502761 hsa-miR-5681a 1 0 0
chr8:123502434|123502761 hsa-miR-5698 1 0 0
chr8:123502434|123502761 hsa-miR-6124 1 1 0
chr8:123502434|123502761 hsa-miR-7703 0 1 0
chr8:123502434|123502761 hsa-miR-29b-1-5p 0 1 0
chr8:123502434|123502761 hsa-miR-6840-3p 0 1 0
chr8:123502434|123502761 hsa-miR-6825-5p 0 1 0
chr8:123502434|123502761 hsa-miR-6894-5p 0 1 0
chr8:123502434|123502761 hsa-miR-4687-3p 1 0 0
chr8:123502434|123502761 hsa-miR-29b-2-5p 0 1 0
chr8:123502434|123502761 hsa-miR-4695-5p 1 0 0
chr8:123502434|123502761 hsa-miR-6746-5p 1 0 0
chr8:123502434|123502761 hsa-miR-4753-5p 0 1 0
chr8:123502434|123502761 hsa-miR-6849-3p 0 1 0
chr8:123502434|123502761 hsa-miR-6798-5p 1 0 0
chr8:123502434|123502761 hsa-miR-6782-5p 1 0 0
chr8:123502434|123502761 hsa-miR-4793-3p 0 1 0
chr8:123502434|123502761 hsa-miR-7109-5p 1 0 0
chr8:123502434|123502761 hsa-miR-1229-5p 1 0 0
chr8:123502434|123502761 hsa-miR-6516-5p 0 1 0
chr8:123502434|123502761 hsa-miR-6780a-3p 0 1 0
chr8:123502434|123502761 hsa-miR-6824-5p 1 0 0
chr8:123502434|123502761 hsa-miR-7160-3p 0 1 0
chr8:123502434|123502761 hsa-miR-6499-3p 0 1 0
chr8:123502434|123502761 hsa-miR-4742-5p 0 1 0
chr8:123502434|123502761 hsa-miR-519d-5p 0 1 0
chr8:123502434|123502761 hsa-miR-4746-5p 1 0 0
chr8:123502434|123502761 hsa-miR-6733-3p 0 1 0
chr8:123502434|123502761 hsa-miR-6812-5p 1 0 0
chr8:123502434|123502761 hsa-miR-6870-5p 1 0 0
chr8:123502434|123502761 hsa-miR-6803-5p 1 0 0
chr8:123502434|123502761 hsa-miR-6751-5p 1 0 0
chr8:123502434|123502761 hsa-miR-6797-5p 1 0 0
chr8:123502434|123502761 hsa-miR-7111-5p 1 0 0
chr8:123502434|123502761 hsa-miR-5196-5p 1 0 0
chr8:123502434|123502761 hsa-miR-328-5p 1 0 0
chr8:123502434|123502761 hsa-miR-6795-5p 1 0 0
chr8:123502434|123502761 hsa-miR-6887-5p 1 1 0
chr8:123502434|123502761 hsa-miR-939-5p 1 0 0
chr8:123502434|123502761 hsa-miR-6773-5p 1 1 0
chr8:123502434|123502761 hsa-miR-4665-5p 1 0 0
chr8:123502434|123502761 hsa-miR-6855-5p 0 1 0
chr8:123502434|123502761 hsa-miR-6824-3p 0 1 0
chr8:123502434|123502761 hsa-miR-6807-3p 0 1 0
chr8:123502434|123502761 hsa-miR-6764-3p 0 1 0
chr8:123502434|123502761 hsa-miR-519e-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr8:123502434|123502761
ORF Type ORF1
Protein Length 59
Nucleotide Length 180
Protein Sequence MFCFGDRLECSGTIIAHCKPQTPGLKQSSPGTVLSWPSFPPNELQHDRKKGTCAFGLFW
Nucleotide Sequence TTGTTTTGTTTTGGAGACAGGCTGGAGTGCAGTGGCACAATCATAGCTCACTGCAAACCTCAGACTCCTGGGCTCAAGCAATCCTCCCCTGGGACTGTTTTAAGTTGGCCTTCTTTTCCCCCAAATGAGCTACAACATGACAGGAAAAAAGGAACATGTGCTTTTGGGTTGTTCTGGTGA
CircID chr8:123502434|123502761
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MSYNMTGKKEHVLLGCSGEQITLRRALFA
Nucleotide Sequence ATGAGCTACAACATGACAGGAAAAAAGGAACATGTGCTTTTGGGTTGTTCTGGTGAACAGATAACTCTAAGGAGGGCCCTGTTTGCCTGA
CircID chr8:123502434|123502761
ORF Type ORF3
Protein Length 45
Nucleotide Length 138
Protein Sequence MFCFVLFWRQAGVQWHNHSSLQTSDSWAQAILPWDCFKLAFFSPK
Nucleotide Sequence TTGTTTTGTTTTGTTTTGTTTTGGAGACAGGCTGGAGTGCAGTGGCACAATCATAGCTCACTGCAAACCTCAGACTCCTGGGCTCAAGCAATCCTCCCCTGGGACTGTTTTAAGTTGGCCTTCTTTTCCCCCAAATGA
CircID chr8:123502434|123502761
ORF Type ORF4
Protein Length 36
Nucleotide Length 111
Protein Sequence MFTRTTQKHMFLFSCHVVAHLGEKKANLKQSQGRIA
Nucleotide Sequence CTGTTCACCAGAACAACCCAAAAGCACATGTTCCTTTTTTCCTGTCATGTTGTAGCTCATTTGGGGGAAAAGAAGGCCAACTTAAAACAGTCCCAGGGGAGGATTGCTTGA
CircID chr8:123502434|123502761
ORF Type ORF5
Protein Length 32
Nucleotide Length 96
Protein Sequence MLEPRSLRFAVSYDCATALQPVSKTKQNKTKA
Nucleotide Sequence TTGCTTGAGCCCAGGAGTCTGAGGTTTGCAGTGAGCTATGATTGTGCCACTGCACTCCAGCCTGTCTCCAAAACAAAACAAAACAAAACAAAAGCC
CircID chr8:123502434|123502761
ORF Type ORF6
Protein Length 66
Nucleotide Length 201
Protein Sequence MERDIGGNPLVSHFLFRQTGPSLELSVHQNNPKAHVPFFLSCCSSFGGKEGQLKTVPGEDCLSPGV
Nucleotide Sequence ATGGAAAGGGATATTGGAGGCAATCCTCTGGTTTCACACTTCCTTTTCAGGCAAACAGGGCCCTCCTTAGAGTTATCTGTTCACCAGAACAACCCAAAAGCACATGTTCCTTTTTTCCTGTCATGTTGTAGCTCATTTGGGGGAAAAGAAGGCCAACTTAAAACAGTCCCAGGGGAGGATTGCTTGAGCCCAGGAGTCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab