CircRNA Information

General Information
circRNA Basic Information
CircID chr8:124454252|124454401
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence AGAGGAAGCAGTGAGAGATGTGTTGAAGATGGGGGTTGTTGTAAGGATTAAAAAAGCACTGTGTCTTGTACACAGTAATCCCCTAGGGAGATGTTAGCCAGCATGTGATCCCACCACAAAAACAAACAGCCTGCTTATTTCCATTCCCAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:124454252|124454401 hsa-miR-520f-5p 0 0 1
chr8:124454252|124454401 hsa-miR-520f-3p 0 0 1
chr8:124454252|124454401 hsa-miR-638 1 1 1
chr8:124454252|124454401 hsa-miR-421 0 0 1
chr8:124454252|124454401 hsa-miR-892a 0 0 1
chr8:124454252|124454401 hsa-miR-541-5p 0 0 1
chr8:124454252|124454401 hsa-miR-541-3p 0 0 1
chr8:124454252|124454401 hsa-miR-654-5p 0 0 1
chr8:124454252|124454401 hsa-miR-769-3p 0 0 1
chr8:124454252|124454401 hsa-miR-450b-3p 0 0 1
chr8:124454252|124454401 hsa-miR-516a-3p 0 0 1
chr8:124454252|124454401 hsa-miR-128 0 0 1
chr8:124454252|124454401 hsa-miR-500 0 0 1
chr8:124454252|124454401 hsa-miR-1268a 1 0 0
chr8:124454252|124454401 hsa-miR-1913 1 0 0
chr8:124454252|124454401 hsa-miR-3943 1 0 0
chr8:124454252|124454401 hsa-miR-1268b 1 0 0
chr8:124454252|124454401 hsa-miR-4440 1 0 0
chr8:124454252|124454401 hsa-miR-4525 1 0 0
chr8:124454252|124454401 hsa-miR-4654 1 0 0
chr8:124454252|124454401 hsa-miR-4681 1 0 0
chr8:124454252|124454401 hsa-miR-4741 1 0 0
chr8:124454252|124454401 hsa-miR-5093 1 0 0
chr8:124454252|124454401 hsa-miR-6165 1 0 0
chr8:124454252|124454401 hsa-miR-4433b-3p 1 0 0
chr8:124454252|124454401 hsa-miR-6857-5p 1 0 0
chr8:124454252|124454401 hsa-miR-4687-3p 1 0 0
chr8:124454252|124454401 hsa-miR-6757-5p 1 0 0
chr8:124454252|124454401 hsa-miR-6716-5p 1 1 0
chr8:124454252|124454401 hsa-miR-1292-5p 1 0 0
chr8:124454252|124454401 hsa-miR-6796-5p 1 0 0
chr8:124454252|124454401 hsa-miR-5580-5p 0 1 0
chr8:124454252|124454401 hsa-miR-4690-5p 1 0 0
chr8:124454252|124454401 hsa-miR-149-3p 1 0 0
chr8:124454252|124454401 hsa-miR-1304-3p 0 1 0
chr8:124454252|124454401 hsa-miR-5010-5p 1 0 0
chr8:124454252|124454401 hsa-miR-500a-5p 0 1 0
chr8:124454252|124454401 hsa-miR-6859-3p 1 0 0
chr8:124454252|124454401 hsa-miR-6893-5p 1 0 0
chr8:124454252|124454401 hsa-miR-6808-5p 1 0 0
chr8:124454252|124454401 hsa-miR-4728-5p 1 0 0
chr8:124454252|124454401 hsa-miR-5196-5p 1 0 0
chr8:124454252|124454401 hsa-miR-6780b-5p 1 0 0
chr8:124454252|124454401 hsa-miR-3619-5p 1 0 0
chr8:124454252|124454401 hsa-miR-505-3p 1 0 0
chr8:124454252|124454401 hsa-miR-6833-3p 0 1 0
chr8:124454252|124454401 hsa-miR-3681-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:124454252|124454401
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MCTRHSAFLILTTTPIFNTSLTASS
Nucleotide Sequence CTGTGTACAAGACACAGTGCTTTTTTAATCCTTACAACAACCCCCATCTTCAACACATCTCTCACTGCTTCCTCT

CircID chr8:124454252|124454401
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MFLWWDHMLANISLGDYCVQDTVLF
Nucleotide Sequence TTGTTTTTGTGGTGGGATCACATGCTGGCTAACATCTCCCTAGGGGATTACTGTGTACAAGACACAGTGCTTTTTTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites