CircRNA Information

General Information
circRNA Basic Information
CircID chr8:124999360|124999557
Strand +
CircType exon
Host Gene ENSG00000104549.10;
Algorism CIRI2;
Sequence CCCCGTTTCGGTGGCGACAGCGGTAGGAGAGCACCAGGCCCAGCGAGAGGAACACCAGCACGCACAACAGGACCTCCCTGTTGGCCAAAGTGATGAAGTCCCCGAACTTCTTATAAAAATAGGTGAAAGTGGCAATGCCCAGAAAAGTCCACATGGTTCCAAGGCTTCTTTGGTGGCACCGGTCAAGGCGGAGATTAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:124999360|124999557 hsa-miR-210-5p 0 0 1
chr8:124999360|124999557 hsa-miR-210-3p 0 0 1
chr8:124999360|124999557 hsa-miR-216a-5p 0 0 1
chr8:124999360|124999557 hsa-miR-216a-3p 0 0 1
chr8:124999360|124999557 hsa-miR-588 0 0 1
chr8:124999360|124999557 hsa-miR-612 1 1 1
chr8:124999360|124999557 hsa-miR-147b-5p 0 0 1
chr8:124999360|124999557 hsa-miR-147b-3p 0 0 1
chr8:124999360|124999557 hsa-miR-216b-5p 0 0 1
chr8:124999360|124999557 hsa-miR-216b-3p 0 0 1
chr8:124999360|124999557 hsa-miR-1227-5p 0 0 1
chr8:124999360|124999557 hsa-miR-1227-3p 0 0 1
chr8:124999360|124999557 hsa-miR-1256 0 1 1
chr8:124999360|124999557 hsa-miR-1321 0 0 1
chr8:124999360|124999557 hsa-miR-542-5p 0 0 1
chr8:124999360|124999557 hsa-miR-138 0 0 1
chr8:124999360|124999557 hsa-miR-1285 0 0 1
chr8:124999360|124999557 hsa-miR-720 0 0 1
chr8:124999360|124999557 hsa-miR-661 1 0 0
chr8:124999360|124999557 hsa-miR-762 1 0 0
chr8:124999360|124999557 hsa-miR-1268a 1 0 0
chr8:124999360|124999557 hsa-miR-2861 1 0 0
chr8:124999360|124999557 hsa-miR-4254 1 0 0
chr8:124999360|124999557 hsa-miR-1268b 1 0 0
chr8:124999360|124999557 hsa-miR-4491 0 1 0
chr8:124999360|124999557 hsa-miR-4657 0 1 0
chr8:124999360|124999557 hsa-miR-5681b 0 1 0
chr8:124999360|124999557 hsa-miR-8089 1 0 0
chr8:124999360|124999557 hsa-miR-138-5p 1 1 0
chr8:124999360|124999557 hsa-miR-6741-5p 1 0 0
chr8:124999360|124999557 hsa-miR-5589-5p 1 0 0
chr8:124999360|124999557 hsa-miR-6845-3p 1 1 0
chr8:124999360|124999557 hsa-miR-185-3p 1 0 0
chr8:124999360|124999557 hsa-miR-6827-5p 1 0 0
chr8:124999360|124999557 hsa-miR-6821-5p 1 0 0
chr8:124999360|124999557 hsa-miR-6735-3p 1 0 0
chr8:124999360|124999557 hsa-miR-939-3p 1 1 0
chr8:124999360|124999557 hsa-miR-4640-5p 1 0 0
chr8:124999360|124999557 hsa-miR-6749-5p 1 0 0
chr8:124999360|124999557 hsa-miR-146b-3p 1 0 0
chr8:124999360|124999557 hsa-miR-6895-3p 1 0 0
chr8:124999360|124999557 hsa-miR-6754-5p 0 1 0
chr8:124999360|124999557 hsa-miR-3620-5p 1 0 0
chr8:124999360|124999557 hsa-miR-3187-5p 1 0 0
chr8:124999360|124999557 hsa-miR-365a-5p 1 1 0
chr8:124999360|124999557 hsa-miR-365b-5p 0 1 0
chr8:124999360|124999557 hsa-miR-3085-5p 1 1 0
chr8:124999360|124999557 hsa-miR-5009-5p 0 1 0
chr8:124999360|124999557 hsa-miR-3059-5p 1 0 0
chr8:124999360|124999557 hsa-miR-330-5p 1 0 0
chr8:124999360|124999557 hsa-miR-6783-3p 1 0 0
chr8:124999360|124999557 hsa-miR-10397-5p 0 1 0
chr8:124999360|124999557 hsa-miR-7156-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr8:124999360|124999557
ORF Type ORF1
Protein Length 62
Nucleotide Length 186
Protein Sequence MTGATKEALEPCGLFWALPLSPIFIRSSGTSSLWPTGRSCCACWCSSRWAWCSPTAVATETG
Nucleotide Sequence TTGACCGGTGCCACCAAAGAAGCCTTGGAACCATGTGGACTTTTCTGGGCATTGCCACTTTCACCTATTTTTATAAGAAGTTCGGGGACTTCATCACTTTGGCCAACAGGGAGGTCCTGTTGTGCGTGCTGGTGTTCCTCTCGCTGGGCCTGGTGCTCTCCTACCGCTGTCGCCACCGAAACGGGG

CircID chr8:124999360|124999557
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MWTFLGIATFTYFYKKFGDFITLANREVLLCVLVFLSLGLVLSYRCRHRNG
Nucleotide Sequence ATGTGGACTTTTCTGGGCATTGCCACTTTCACCTATTTTTATAAGAAGTTCGGGGACTTCATCACTTTGGCCAACAGGGAGGTCCTGTTGTGCGTGCTGGTGTTCCTCTCGCTGGGCCTGGTGCTCTCCTACCGCTGTCGCCACCGAAACGGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites