CircRNA Information

General Information
circRNA Basic Information
CircID chr8:127323015|127323154
Strand -
CircType exon
Host Gene ENSG00000246228.5;
Algorism CIRI2;
Sequence CTGCACAGCCTTAGGACACTGCTCTCTGCATCCAGGCCACTCCAGTTCCAGCCTCACTCAAAAGGCCCCAGGTACAGTTCAGGTCACAGCTCTGGAAAGCACATTCTGTAAGCCTTGGTGGCTTCCATGTTGTATTAAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:127323015|127323154 hsa-miR-122-5p 0 0 1
chr8:127323015|127323154 hsa-miR-122-3p 0 0 1
chr8:127323015|127323154 hsa-miR-600 0 0 1
chr8:127323015|127323154 hsa-miR-619-5p 0 0 1
chr8:127323015|127323154 hsa-miR-619-3p 0 0 1
chr8:127323015|127323154 hsa-miR-631 0 0 1
chr8:127323015|127323154 hsa-miR-636 0 0 1
chr8:127323015|127323154 hsa-miR-655-5p 0 0 1
chr8:127323015|127323154 hsa-miR-655-3p 0 0 1
chr8:127323015|127323154 hsa-miR-671-5p 0 1 1
chr8:127323015|127323154 hsa-miR-485-5p 0 0 1
chr8:127323015|127323154 hsa-miR-525-5p 0 0 1
chr8:127323015|127323154 hsa-miR-520a-5p 0 0 1
chr8:127323015|127323154 hsa-miR-218 0 0 1
chr8:127323015|127323154 hsa-miR-1254 0 0 1
chr8:127323015|127323154 hsa-miR-608 1 0 0
chr8:127323015|127323154 hsa-miR-637 1 0 0
chr8:127323015|127323154 hsa-miR-661 1 0 0
chr8:127323015|127323154 hsa-miR-762 1 0 0
chr8:127323015|127323154 hsa-miR-1183 1 0 0
chr8:127323015|127323154 hsa-miR-663b 1 0 0
chr8:127323015|127323154 hsa-miR-1294 1 1 0
chr8:127323015|127323154 hsa-miR-2278 0 1 0
chr8:127323015|127323154 hsa-miR-2861 1 0 0
chr8:127323015|127323154 hsa-miR-544b 0 1 0
chr8:127323015|127323154 hsa-miR-3137 1 0 0
chr8:127323015|127323154 hsa-miR-378c 1 0 0
chr8:127323015|127323154 hsa-miR-4316 0 1 0
chr8:127323015|127323154 hsa-miR-3652 0 1 0
chr8:127323015|127323154 hsa-miR-4430 0 1 0
chr8:127323015|127323154 hsa-miR-3135b 1 0 0
chr8:127323015|127323154 hsa-miR-4519 0 1 0
chr8:127323015|127323154 hsa-miR-1587 1 0 0
chr8:127323015|127323154 hsa-miR-4539 1 1 0
chr8:127323015|127323154 hsa-miR-4658 1 0 0
chr8:127323015|127323154 hsa-miR-4741 1 0 0
chr8:127323015|127323154 hsa-miR-5787 1 0 0
chr8:127323015|127323154 hsa-miR-6081 1 1 0
chr8:127323015|127323154 hsa-miR-6085 1 0 0
chr8:127323015|127323154 hsa-miR-6086 1 0 0
chr8:127323015|127323154 hsa-miR-6128 0 1 0
chr8:127323015|127323154 hsa-miR-7974 1 1 0
chr8:127323015|127323154 hsa-miR-8089 1 0 0
chr8:127323015|127323154 hsa-miR-12113 0 1 0
chr8:127323015|127323154 hsa-miR-7155-5p 1 0 0
chr8:127323015|127323154 hsa-miR-6765-5p 1 0 0
chr8:127323015|127323154 hsa-miR-6728-5p 1 0 0
chr8:127323015|127323154 hsa-miR-7851-3p 1 1 0
chr8:127323015|127323154 hsa-miR-1227-5p 1 0 0
chr8:127323015|127323154 hsa-miR-6089 1 0 0
chr8:127323015|127323154 hsa-miR-6827-5p 1 0 0
chr8:127323015|127323154 hsa-miR-2467-3p 1 0 0
chr8:127323015|127323154 hsa-miR-345-3p 1 0 0
chr8:127323015|127323154 hsa-miR-6852-5p 0 1 0
chr8:127323015|127323154 hsa-miR-4738-3p 1 0 0
chr8:127323015|127323154 hsa-miR-937-5p 1 0 0
chr8:127323015|127323154 hsa-miR-34a-5p 1 1 0
chr8:127323015|127323154 hsa-miR-676-3p 0 1 0
chr8:127323015|127323154 hsa-miR-6808-3p 0 1 0
chr8:127323015|127323154 hsa-miR-6812-5p 1 0 0
chr8:127323015|127323154 hsa-miR-5001-5p 1 0 0
chr8:127323015|127323154 hsa-miR-6756-5p 0 1 0
chr8:127323015|127323154 hsa-miR-6803-5p 1 0 0
chr8:127323015|127323154 hsa-miR-7107-5p 1 0 0
chr8:127323015|127323154 hsa-miR-3620-5p 1 0 0
chr8:127323015|127323154 hsa-miR-4685-5p 1 1 0
chr8:127323015|127323154 hsa-miR-4745-5p 1 0 0
chr8:127323015|127323154 hsa-miR-6846-5p 1 0 0
chr8:127323015|127323154 hsa-miR-6848-5p 1 0 0
chr8:127323015|127323154 hsa-miR-6845-5p 1 0 0
chr8:127323015|127323154 hsa-miR-4758-5p 1 0 0
chr8:127323015|127323154 hsa-miR-3116 0 1 0
chr8:127323015|127323154 hsa-miR-6791-5p 1 0 0
chr8:127323015|127323154 hsa-miR-6762-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr8:127323015|127323154
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence LHSLRTLLSASRPLQFQPHSKGPRYSSGHSSGKHIL
Nucleotide Sequence CTGCACAGCCTTAGGACACTGCTCTCTGCATCCAGGCCACTCCAGTTCCAGCCTCACTCAAAAGGCCCCAGGTACAGTTCAGGTCACAGCTCTGGAAAGCACATTCTGTAA
CircID chr8:127323015|127323154
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MHPGHSSSSLTQKAPGTVQVTALESTFCKPWWLPCCIK
Nucleotide Sequence CTGCATCCAGGCCACTCCAGTTCCAGCCTCACTCAAAAGGCCCCAGGTACAGTTCAGGTCACAGCTCTGGAAAGCACATTCTGTAAGCCTTGGTGGCTTCCATGTTGTATTAAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab