CircRNA Information

General Information
circRNA Basic Information
CircID chr8:127919331|127919604
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CACCCTATGCCACAGTCGCCAATAGAGCCGGAGTGGGTAGCAGGATGGTGACTGCTCAGGGGAGGGGGCAGACCCCACTCAGACTGGATGAAGAGTGAGAAAAAATATATAACATTGCACAAAAGTGGGGAGAAGCCTTCAGTCTCCAAAGCCCTGCTCCTGAAGCCCAGATAAACAGACTGTGTCGCTAAGTCAATAACTTTCCACAGTAGAGGGTTAAGAAGAGGAAATGGCTTTGTTACCTGAATCCTTTCCACTTGTTAAAAGAAGTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:127919331|127919604 hsa-miR-19a-5p 0 0 1
chr8:127919331|127919604 hsa-miR-19a-3p 0 0 1
chr8:127919331|127919604 hsa-miR-370-5p 0 0 1
chr8:127919331|127919604 hsa-miR-370-3p 0 0 1
chr8:127919331|127919604 hsa-miR-346 0 1 1
chr8:127919331|127919604 hsa-miR-495-5p 0 0 1
chr8:127919331|127919604 hsa-miR-495-3p 0 0 1
chr8:127919331|127919604 hsa-miR-612 1 0 1
chr8:127919331|127919604 hsa-miR-617 0 0 1
chr8:127919331|127919604 hsa-miR-620 0 0 1
chr8:127919331|127919604 hsa-miR-622 0 1 1
chr8:127919331|127919604 hsa-miR-892a 0 0 1
chr8:127919331|127919604 hsa-miR-1229-5p 0 0 1
chr8:127919331|127919604 hsa-miR-1229-3p 0 0 1
chr8:127919331|127919604 hsa-miR-1238-5p 0 0 1
chr8:127919331|127919604 hsa-miR-1238-3p 0 0 1
chr8:127919331|127919604 hsa-miR-1270 0 0 1
chr8:127919331|127919604 hsa-miR-615-5p 0 0 1
chr8:127919331|127919604 hsa-miR-331-3p 0 0 1
chr8:127919331|127919604 hsa-miR-324-3p 0 0 1
chr8:127919331|127919604 hsa-miR-125a-5p 0 1 1
chr8:127919331|127919604 hsa-miR-125b 0 0 1
chr8:127919331|127919604 hsa-miR-1285 0 0 1
chr8:127919331|127919604 hsa-miR-19b 0 0 1
chr8:127919331|127919604 hsa-miR-1273 0 0 1
chr8:127919331|127919604 hsa-miR-768-5p 0 0 1
chr8:127919331|127919604 hsa-miR-935 0 1 0
chr8:127919331|127919604 hsa-miR-1913 1 1 0
chr8:127919331|127919604 hsa-miR-4319 0 1 0
chr8:127919331|127919604 hsa-miR-4322 1 0 0
chr8:127919331|127919604 hsa-miR-378g 1 1 0
chr8:127919331|127919604 hsa-miR-1587 1 0 0
chr8:127919331|127919604 hsa-miR-3978 0 1 0
chr8:127919331|127919604 hsa-miR-4674 1 0 0
chr8:127919331|127919604 hsa-miR-6132 1 1 0
chr8:127919331|127919604 hsa-miR-6860 1 0 0
chr8:127919331|127919604 hsa-miR-7703 1 0 0
chr8:127919331|127919604 hsa-miR-8077 0 1 0
chr8:127919331|127919604 hsa-miR-153-5p 0 1 0
chr8:127919331|127919604 hsa-miR-6749-3p 1 0 0
chr8:127919331|127919604 hsa-miR-4433a-3p 1 0 0
chr8:127919331|127919604 hsa-miR-6881-3p 0 1 0
chr8:127919331|127919604 hsa-miR-6742-5p 0 1 0
chr8:127919331|127919604 hsa-miR-877-3p 0 1 0
chr8:127919331|127919604 hsa-miR-6815-3p 0 1 0
chr8:127919331|127919604 hsa-miR-4793-5p 1 1 0
chr8:127919331|127919604 hsa-miR-6784-5p 1 0 0
chr8:127919331|127919604 hsa-miR-1180-3p 1 0 0
chr8:127919331|127919604 hsa-miR-3158-3p 0 1 0
chr8:127919331|127919604 hsa-miR-873-3p 0 1 0
chr8:127919331|127919604 hsa-miR-6794-3p 1 1 0
chr8:127919331|127919604 hsa-miR-1296-3p 0 1 0
chr8:127919331|127919604 hsa-miR-541-5p 0 1 0
chr8:127919331|127919604 hsa-miR-6857-3p 1 1 0
chr8:127919331|127919604 hsa-miR-6515-3p 1 0 0
chr8:127919331|127919604 hsa-miR-6812-3p 1 0 0
chr8:127919331|127919604 hsa-miR-6800-3p 1 0 0
chr8:127919331|127919604 hsa-miR-6775-5p 1 0 0
chr8:127919331|127919604 hsa-miR-6743-5p 1 0 0
chr8:127919331|127919604 hsa-miR-3620-5p 1 0 0
chr8:127919331|127919604 hsa-miR-6836-5p 0 1 0
chr8:127919331|127919604 hsa-miR-4685-5p 1 0 0
chr8:127919331|127919604 hsa-miR-4745-5p 0 1 0
chr8:127919331|127919604 hsa-miR-3187-5p 1 0 0
chr8:127919331|127919604 hsa-miR-6753-3p 0 1 0
chr8:127919331|127919604 hsa-miR-6727-3p 1 0 0
chr8:127919331|127919604 hsa-miR-6893-3p 1 1 0
chr8:127919331|127919604 hsa-miR-6511a-3p 1 1 0
chr8:127919331|127919604 hsa-miR-3059-5p 0 1 0
chr8:127919331|127919604 hsa-miR-6503-5p 0 1 0
chr8:127919331|127919604 hsa-miR-125b-5p 0 1 0
chr8:127919331|127919604 hsa-miR-4704-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr8:127919331|127919604
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MLRGGGRPHSDWMKSEKKYITLHKSGEKPSVSKALLLKPR
Nucleotide Sequence CTGCTCAGGGGAGGGGGCAGACCCCACTCAGACTGGATGAAGAGTGAGAAAAAATATATAACATTGCACAAAAGTGGGGAGAAGCCTTCAGTCTCCAAAGCCCTGCTCCTGAAGCCCAGATAA

CircID chr8:127919331|127919604
ORF Type ORF2
Protein Length 40
Nucleotide Length 123
Protein Sequence MFIWASGAGLWRLKASPHFCAMLYIFSHSSSSLSGVCPLP
Nucleotide Sequence CTGTTTATCTGGGCTTCAGGAGCAGGGCTTTGGAGACTGAAGGCTTCTCCCCACTTTTGTGCAATGTTATATATTTTTTCTCACTCTTCATCCAGTCTGAGTGGGGTCTGCCCCCTCCCCTGA

CircID chr8:127919331|127919604
ORF Type ORF3
Protein Length 69
Nucleotide Length 207
Protein Sequence MWKVIDLATQSVYLGFRSRALETEGFSPLLCNVIYFFSLFIQSEWGLPPPLSSHHPATHSGSIGDCGIG
Nucleotide Sequence CTGTGGAAAGTTATTGACTTAGCGACACAGTCTGTTTATCTGGGCTTCAGGAGCAGGGCTTTGGAGACTGAAGGCTTCTCCCCACTTTTGTGCAATGTTATATATTTTTTCTCACTCTTCATCCAGTCTGAGTGGGGTCTGCCCCCTCCCCTGAGCAGTCACCATCCTGCTACCCACTCCGGCTCTATTGGCGACTGTGGCATAGGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites