CircNet

General Information

circRNA Basic Information

CircID	chr8:131978847\|132003285
Strand	+
CircType	exon
Host Gene	ENSG00000132294.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTGACCTCTGGATATAAAGCGAAGACGATTGTTACTGCACTGCCAGGGTCTTTCCTGGATCCTTTGTTATCACCATCTCTCATGGAGGACTACGAACTGAGACAGTTGGTCTTGGAAGTAATGCATAATCTCATGGATCGTCATGACAATAGGGCAAAGCTTCGAGGGATCAGGTTAGTAACACTGAAGAAATCACTTTTGAAGCATTGAAGAAAGCAATTGATACCAGTGGAATGGAAGAACAGGAAAAGGAAAAGAGGCGTCTTGTGATAGAGAAATTTCAGAAAGCACCTTTTGAAGAAATAGCAGCACAGTGTGAATCCAAAGCAAATTTGCTTCATGATAGACTTGCCCAAATATTGGAACTCACCATACG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr8:131978847\|132003285	hsa-miR-143-5p	0	1	1
chr8:131978847\|132003285	hsa-miR-26b-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr8:131978847\|132003285
ORF Type	ORF1
Protein Length	67
Nucleotide Length	201
Protein Sequence	MKQICFGFTLCCYFFKRCFLKFLYHKTPLFLFLFFHSTGINCFLQCFKSDFFSVTNLIPRSFALLS*
Nucleotide Sequence	ATGAAGCAAATTTGCTTTGGATTCACACTGTGCTGCTATTTCTTCAAAAGGTGCTTTCTGAAATTTCTCTATCACAAGACGCCTCTTTTCCTTTTCCTGTTCTTCCATTCCACTGGTATCAATTGCTTTCTTCAATGCTTCAAAAGTGATTTCTTCAGTGTTACTAACCTGATCCCTCGAAGCTTTGCCCTATTGTCATGA

CircID	chr8:131978847\|132003285
ORF Type	ORF2
Protein Length	47
Nucleotide Length	141
Protein Sequence	MEEQEKEKRRLVIEKFQKAPFEEIAAQCESKANLLHDRLAQILELTI
Nucleotide Sequence	ATGGAAGAACAGGAAAAGGAAAAGAGGCGTCTTGTGATAGAGAAATTTCAGAAAGCACCTTTTGAAGAAATAGCAGCACAGTGTGAATCCAAAGCAAATTTGCTTCATGATAGACTTGCCCAAATATTGGAACTCACCATA

CircID	chr8:131978847\|132003285
ORF Type	ORF3
Protein Length	43
Nucleotide Length	129
Protein Sequence	MEDYELRQLVLEVMHNLMDRHDNRAKLRGIRLVTLKKSLLKH*
Nucleotide Sequence	ATGGAGGACTACGAACTGAGACAGTTGGTCTTGGAAGTAATGCATAATCTCATGGATCGTCATGACAATAGGGCAAAGCTTCGAGGGATCAGGTTAGTAACACTGAAGAAATCACTTTTGAAGCATTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr8:131978847\|132003285	FUS	1	1	0
chr8:131978847\|132003285	CELF2	1	0	0
chr8:131978847\|132003285	SRSF1	0	1	2
chr8:131978847\|132003285	NOP58	1	0	5
chr8:131978847\|132003285	U2AF1	0	0	1
chr8:131978847\|132003285	U2AF2	10	0	2
chr8:131978847\|132003285	DDX54	1	1	10
chr8:131978847\|132003285	SF3A3	0	0	1
chr8:131978847\|132003285	PTBP1	0	0	1
chr8:131978847\|132003285	TRA2A	0	0	5
chr8:131978847\|132003285	LIN28B	2	0	0
chr8:131978847\|132003285	FXR2	0	0	1
chr8:131978847\|132003285	IGF2BP1	0	1	1
chr8:131978847\|132003285	IGF2BP3	0	0	1
chr8:131978847\|132003285	IGF2BP2	0	1	7
chr8:131978847\|132003285	TARDBP	1	0	0
chr8:131978847\|132003285	BUD13	0	0	2
chr8:131978847\|132003285	RBM47	2	0	3
chr8:131978847\|132003285	CSTF2T	1	0	2
chr8:131978847\|132003285	FBL	0	0	2
chr8:131978847\|132003285	EWSR1	0	1	0
chr8:131978847\|132003285	EIF4A3	3	1	9
chr8:131978847\|132003285	AGO2	0	0	1

CircRNA Information