CircRNA Information

General Information
circRNA Basic Information
CircID chr8:133228464|133228699
Strand +
CircType exon
Host Gene ENSG00000104415.12;
Algorism CIRI2;
Sequence CTGTCTTGGTCATTTCAGTGGGTCTGGCATGGTCTGCAGCTGGGTCTCTCAAGGCTCTGTAAGAGTAGAGGAGTGTTCCAGGGCACCACTCTCAGGGGCCAGACAGGCCAGTCCAGAGGCCTTACCAATTCCTATGAACCCCAAGCAGGACAAGGGAGAAGATTCAAGGAAGAGCCTGGCCAACTGCCCAAAGCCCTGCCAGTCAGCAGCTGATTCAGTGTGAGAGTCAATTGGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:133228464|133228699 hsa-miR-370-5p 0 0 1
chr8:133228464|133228699 hsa-miR-370-3p 0 0 1
chr8:133228464|133228699 hsa-miR-422a 0 0 1
chr8:133228464|133228699 hsa-miR-376b-5p 0 0 1
chr8:133228464|133228699 hsa-miR-376b-3p 0 0 1
chr8:133228464|133228699 hsa-miR-484 0 0 1
chr8:133228464|133228699 hsa-miR-193b-5p 0 0 1
chr8:133228464|133228699 hsa-miR-193b-3p 0 0 1
chr8:133228464|133228699 hsa-miR-588 0 0 1
chr8:133228464|133228699 hsa-miR-591 0 0 1
chr8:133228464|133228699 hsa-miR-600 0 1 1
chr8:133228464|133228699 hsa-miR-623 0 0 1
chr8:133228464|133228699 hsa-miR-874-5p 0 0 1
chr8:133228464|133228699 hsa-miR-874-3p 0 0 1
chr8:133228464|133228699 hsa-miR-942-5p 0 0 1
chr8:133228464|133228699 hsa-miR-942-3p 0 0 1
chr8:133228464|133228699 hsa-miR-1231 0 0 1
chr8:133228464|133228699 hsa-miR-1236-5p 0 0 1
chr8:133228464|133228699 hsa-miR-1236-3p 0 0 1
chr8:133228464|133228699 hsa-miR-1288-5p 0 0 1
chr8:133228464|133228699 hsa-miR-1288-3p 0 0 1
chr8:133228464|133228699 hsa-miR-146b-3p 0 0 1
chr8:133228464|133228699 hsa-miR-502-5p 0 0 1
chr8:133228464|133228699 hsa-miR-1207-3p 0 0 1
chr8:133228464|133228699 hsa-miR-628-5p 0 0 1
chr8:133228464|133228699 hsa-miR-1207-5p 1 0 1
chr8:133228464|133228699 hsa-miR-125a-5p 0 0 1
chr8:133228464|133228699 hsa-miR-483-3p 0 1 1
chr8:133228464|133228699 hsa-miR-342-3p 0 1 1
chr8:133228464|133228699 hsa-miR-193a-3p 0 1 1
chr8:133228464|133228699 hsa-miR-125b 0 0 1
chr8:133228464|133228699 hsa-miR-378 0 0 1
chr8:133228464|133228699 hsa-miR-1269 0 0 1
chr8:133228464|133228699 hsa-miR-376a 0 0 1
chr8:133228464|133228699 hsa-miR-203 0 0 1
chr8:133228464|133228699 hsa-miR-612 1 0 0
chr8:133228464|133228699 hsa-miR-663a 1 0 0
chr8:133228464|133228699 hsa-miR-940 1 0 0
chr8:133228464|133228699 hsa-miR-3147 1 0 0
chr8:133228464|133228699 hsa-miR-3155a 0 1 0
chr8:133228464|133228699 hsa-miR-3166 1 0 0
chr8:133228464|133228699 hsa-miR-4308 0 1 0
chr8:133228464|133228699 hsa-miR-4254 0 1 0
chr8:133228464|133228699 hsa-miR-378h 0 1 0
chr8:133228464|133228699 hsa-miR-3155b 0 1 0
chr8:133228464|133228699 hsa-miR-4498 1 0 0
chr8:133228464|133228699 hsa-miR-4505 1 0 0
chr8:133228464|133228699 hsa-miR-4515 0 1 0
chr8:133228464|133228699 hsa-miR-4734 1 0 0
chr8:133228464|133228699 hsa-miR-4780 0 1 0
chr8:133228464|133228699 hsa-miR-5572 0 1 0
chr8:133228464|133228699 hsa-miR-6132 0 1 0
chr8:133228464|133228699 hsa-miR-9718 0 1 0
chr8:133228464|133228699 hsa-miR-12125 0 1 0
chr8:133228464|133228699 hsa-miR-4435 0 1 0
chr8:133228464|133228699 hsa-miR-214-5p 0 1 0
chr8:133228464|133228699 hsa-miR-766-5p 1 0 0
chr8:133228464|133228699 hsa-miR-4755-3p 0 1 0
chr8:133228464|133228699 hsa-miR-6787-3p 0 1 0
chr8:133228464|133228699 hsa-miR-6829-5p 1 0 0
chr8:133228464|133228699 hsa-miR-2467-3p 1 0 0
chr8:133228464|133228699 hsa-miR-3667-5p 0 1 0
chr8:133228464|133228699 hsa-miR-6735-3p 0 1 0
chr8:133228464|133228699 hsa-miR-6784-5p 1 0 0
chr8:133228464|133228699 hsa-miR-1908-5p 1 0 0
chr8:133228464|133228699 hsa-miR-6830-3p 1 0 0
chr8:133228464|133228699 hsa-miR-4446-3p 1 0 0
chr8:133228464|133228699 hsa-miR-937-5p 1 0 0
chr8:133228464|133228699 hsa-miR-941 0 1 0
chr8:133228464|133228699 hsa-miR-3120-5p 0 1 0
chr8:133228464|133228699 hsa-miR-744-5p 1 0 0
chr8:133228464|133228699 hsa-miR-509-3p 0 1 0
chr8:133228464|133228699 hsa-miR-6780b-3p 0 1 0
chr8:133228464|133228699 hsa-miR-4763-3p 1 1 0
chr8:133228464|133228699 hsa-miR-6787-5p 1 0 0
chr8:133228464|133228699 hsa-miR-6775-5p 1 0 0
chr8:133228464|133228699 hsa-miR-6737-5p 1 0 0
chr8:133228464|133228699 hsa-miR-6722-3p 1 0 0
chr8:133228464|133228699 hsa-miR-6779-5p 1 0 0
chr8:133228464|133228699 hsa-miR-6808-5p 1 0 0
chr8:133228464|133228699 hsa-miR-4685-3p 1 1 0
chr8:133228464|133228699 hsa-miR-6836-5p 1 1 0
chr8:133228464|133228699 hsa-miR-10396a-5p 1 0 0
chr8:133228464|133228699 hsa-miR-10396b-5p 1 0 0
chr8:133228464|133228699 hsa-miR-1909-3p 1 0 0
chr8:133228464|133228699 hsa-miR-4685-5p 1 1 0
chr8:133228464|133228699 hsa-miR-6753-3p 0 1 0
chr8:133228464|133228699 hsa-miR-4757-5p 0 1 0
chr8:133228464|133228699 hsa-miR-5699-3p 0 1 0
chr8:133228464|133228699 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:133228464|133228699
ORF Type ORF1
Protein Length 70
Nucleotide Length 213
Protein Sequence LSWSFQWVWHGLQLGLSRLCKSRGVFQGTTLRGQTGQSRGLTNSYEPQAGQGRRFKEEPGQLPKALPVSS
Nucleotide Sequence CTGTCTTGGTCATTTCAGTGGGTCTGGCATGGTCTGCAGCTGGGTCTCTCAAGGCTCTGTAAGAGTAGAGGAGTGTTCCAGGGCACCACTCTCAGGGGCCAGACAGGCCAGTCCAGAGGCCTTACCAATTCCTATGAACCCCAAGCAGGACAAGGGAGAAGATTCAAGGAAGAGCCTGGCCAACTGCCCAAAGCCCTGCCAGTCAGCAGCTGA

CircID chr8:133228464|133228699
ORF Type ORF2
Protein Length 64
Nucleotide Length 195
Protein Sequence MVCSWVSQGSVRVEECSRAPLSGARQASPEALPIPMNPKQDKGEDSRKSLANCPKPCQSAADSV
Nucleotide Sequence ATGGTCTGCAGCTGGGTCTCTCAAGGCTCTGTAAGAGTAGAGGAGTGTTCCAGGGCACCACTCTCAGGGGCCAGACAGGCCAGTCCAGAGGCCTTACCAATTCCTATGAACCCCAAGCAGGACAAGGGAGAAGATTCAAGGAAGAGCCTGGCCAACTGCCCAAAGCCCTGCCAGTCAGCAGCTGATTCAGTGTGA

CircID chr8:133228464|133228699
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MTLTLNQLLTGRALGSWPGSSLNLLPCPAWGS
Nucleotide Sequence TTGACTCTCACACTGAATCAGCTGCTGACTGGCAGGGCTTTGGGCAGTTGGCCAGGCTCTTCCTTGAATCTTCTCCCTTGTCCTGCTTGGGGTTCATAG

CircID chr8:133228464|133228699
ORF Type ORF4
Protein Length 37
Nucleotide Length 114
Protein Sequence MVRPLDWPVWPLRVVPWNTPLLLQSLERPSCRPCQTH
Nucleotide Sequence TTGGTAAGGCCTCTGGACTGGCCTGTCTGGCCCCTGAGAGTGGTGCCCTGGAACACTCCTCTACTCTTACAGAGCCTTGAGAGACCCAGCTGCAGACCATGCCAGACCCACTGA

CircID chr8:133228464|133228699
ORF Type ORF5
Protein Length 44
Nucleotide Length 135
Protein Sequence MARLFLESSPLSCLGFIGIGKASGLACLAPESGALEHSSTLTEP
Nucleotide Sequence TTGGCCAGGCTCTTCCTTGAATCTTCTCCCTTGTCCTGCTTGGGGTTCATAGGAATTGGTAAGGCCTCTGGACTGGCCTGTCTGGCCCCTGAGAGTGGTGCCCTGGAACACTCCTCTACTCTTACAGAGCCTTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites