CircRNA Information

General Information
circRNA Basic Information
CircID chr8:133456387|133456526
Strand -
CircType exon
Host Gene ENSG00000008513.13;
Algorism CIRI2;
Sequence CCCTCTGCTCCCTGCCTGAATGCAGGGCCAGTCTCCAAGGAACTCTGTCTGCAGAGTAGAAAGAGCTGTGGGCTGGGAATCAGGGGCCTGAGGGAGCCCCTGCCACTGCCTGCCCAGAACCAGTGCTCCTCATTCTCCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:133456387|133456526 hsa-miR-34a-5p 0 0 1
chr8:133456387|133456526 hsa-miR-34a-3p 0 0 1
chr8:133456387|133456526 hsa-miR-328-5p 0 0 1
chr8:133456387|133456526 hsa-miR-328-3p 0 0 1
chr8:133456387|133456526 hsa-miR-449a 0 0 1
chr8:133456387|133456526 hsa-miR-432-5p 0 0 1
chr8:133456387|133456526 hsa-miR-432-3p 0 0 1
chr8:133456387|133456526 hsa-miR-193b-5p 0 0 1
chr8:133456387|133456526 hsa-miR-193b-3p 0 0 1
chr8:133456387|133456526 hsa-miR-612 1 1 1
chr8:133456387|133456526 hsa-miR-620 0 0 1
chr8:133456387|133456526 hsa-miR-449b-5p 0 0 1
chr8:133456387|133456526 hsa-miR-449b-3p 0 0 1
chr8:133456387|133456526 hsa-miR-940 0 0 1
chr8:133456387|133456526 hsa-miR-1205 0 0 1
chr8:133456387|133456526 hsa-miR-1291 0 0 1
chr8:133456387|133456526 hsa-miR-1270 0 0 1
chr8:133456387|133456526 hsa-miR-1324 0 1 1
chr8:133456387|133456526 hsa-miR-1184 0 0 1
chr8:133456387|133456526 hsa-miR-502-5p 0 0 1
chr8:133456387|133456526 hsa-miR-1207-5p 1 1 1
chr8:133456387|133456526 hsa-miR-34c-5p 0 0 1
chr8:133456387|133456526 hsa-miR-193a-3p 0 0 1
chr8:133456387|133456526 hsa-miR-1285 0 0 1
chr8:133456387|133456526 hsa-miR-760 1 0 0
chr8:133456387|133456526 hsa-miR-3141 1 0 0
chr8:133456387|133456526 hsa-miR-3166 1 1 0
chr8:133456387|133456526 hsa-miR-4270 0 1 0
chr8:133456387|133456526 hsa-miR-4441 0 1 0
chr8:133456387|133456526 hsa-miR-4469 0 1 0
chr8:133456387|133456526 hsa-miR-4486 1 0 0
chr8:133456387|133456526 hsa-miR-4498 1 0 0
chr8:133456387|133456526 hsa-miR-4514 0 1 0
chr8:133456387|133456526 hsa-miR-4682 1 1 0
chr8:133456387|133456526 hsa-miR-4689 1 1 0
chr8:133456387|133456526 hsa-miR-4692 0 1 0
chr8:133456387|133456526 hsa-miR-4739 1 0 0
chr8:133456387|133456526 hsa-miR-5090 1 0 0
chr8:133456387|133456526 hsa-miR-5685 0 1 0
chr8:133456387|133456526 hsa-miR-6860 1 1 0
chr8:133456387|133456526 hsa-miR-7150 0 1 0
chr8:133456387|133456526 hsa-miR-7977 0 1 0
chr8:133456387|133456526 hsa-miR-8089 1 0 0
chr8:133456387|133456526 hsa-miR-6861-5p 1 0 0
chr8:133456387|133456526 hsa-miR-6894-5p 1 0 0
chr8:133456387|133456526 hsa-miR-210-5p 0 1 0
chr8:133456387|133456526 hsa-miR-139-3p 1 0 0
chr8:133456387|133456526 hsa-miR-6746-5p 0 1 0
chr8:133456387|133456526 hsa-miR-6727-5p 1 0 0
chr8:133456387|133456526 hsa-miR-6806-5p 1 1 0
chr8:133456387|133456526 hsa-miR-6721-5p 1 1 0
chr8:133456387|133456526 hsa-miR-6716-5p 1 0 0
chr8:133456387|133456526 hsa-miR-659-3p 1 0 0
chr8:133456387|133456526 hsa-miR-1229-5p 1 0 0
chr8:133456387|133456526 hsa-miR-1228-5p 1 0 0
chr8:133456387|133456526 hsa-miR-7156-3p 1 0 0
chr8:133456387|133456526 hsa-miR-3158-5p 0 1 0
chr8:133456387|133456526 hsa-miR-450a-2-3p 0 1 0
chr8:133456387|133456526 hsa-miR-7112-5p 1 1 0
chr8:133456387|133456526 hsa-miR-7152-3p 0 1 0
chr8:133456387|133456526 hsa-miR-1225-5p 1 0 0
chr8:133456387|133456526 hsa-miR-7106-3p 0 1 0
chr8:133456387|133456526 hsa-miR-6767-5p 1 0 0
chr8:133456387|133456526 hsa-miR-10400-5p 1 0 0
chr8:133456387|133456526 hsa-miR-4763-3p 1 1 0
chr8:133456387|133456526 hsa-miR-6816-5p 1 0 0
chr8:133456387|133456526 hsa-miR-6893-5p 0 1 0
chr8:133456387|133456526 hsa-miR-1343-5p 1 0 0
chr8:133456387|133456526 hsa-miR-6722-3p 0 1 0
chr8:133456387|133456526 hsa-miR-6774-5p 1 0 0
chr8:133456387|133456526 hsa-miR-6808-5p 0 1 0
chr8:133456387|133456526 hsa-miR-6879-5p 1 0 0
chr8:133456387|133456526 hsa-miR-3620-5p 1 0 0
chr8:133456387|133456526 hsa-miR-5189-5p 1 1 0
chr8:133456387|133456526 hsa-miR-449c-5p 0 1 0
chr8:133456387|133456526 hsa-miR-6858-5p 1 1 0
chr8:133456387|133456526 hsa-miR-3187-5p 1 1 0
chr8:133456387|133456526 hsa-miR-4436b-3p 1 0 0
chr8:133456387|133456526 hsa-miR-939-5p 1 1 0
chr8:133456387|133456526 hsa-miR-34b-5p 0 1 0
chr8:133456387|133456526 hsa-miR-6511b-5p 1 1 0
chr8:133456387|133456526 hsa-miR-3940-5p 1 0 0
chr8:133456387|133456526 hsa-miR-6856-5p 1 0 0
chr8:133456387|133456526 hsa-miR-6799-3p 0 1 0
chr8:133456387|133456526 hsa-miR-10398-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:133456387|133456526
ORF Type ORF1
Protein Length 41
Nucleotide Length 123
Protein Sequence MNAGPVSKELCLQSRKSCGLGIRGLREPLPLPAQNQCSSFS
Nucleotide Sequence CTGAATGCAGGGCCAGTCTCCAAGGAACTCTGTCTGCAGAGTAGAAAGAGCTGTGGGCTGGGAATCAGGGGCCTGAGGGAGCCCCTGCCACTGCCTGCCCAGAACCAGTGCTCCTCATTCTCC

CircID chr8:133456387|133456526
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MWAGNQGPEGAPATACPEPVLLILL
Nucleotide Sequence CTGTGGGCTGGGAATCAGGGGCCTGAGGGAGCCCCTGCCACTGCCTGCCCAGAACCAGTGCTCCTCATTCTCCTG

CircID chr8:133456387|133456526
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MIPSPQLFLLCRQSSLETGPAFRQGAE
Nucleotide Sequence CTGATTCCCAGCCCACAGCTCTTTCTACTCTGCAGACAGAGTTCCTTGGAGACTGGCCCTGCATTCAGGCAGGGAGCAGAG

CircID chr8:133456387|133456526
ORF Type ORF4
Protein Length 41
Nucleotide Length 123
Protein Sequence MVLGRQWQGLPQAPDSQPTALSTLQTEFLGDWPCIQAGSRG
Nucleotide Sequence CTGGTTCTGGGCAGGCAGTGGCAGGGGCTCCCTCAGGCCCCTGATTCCCAGCCCACAGCTCTTTCTACTCTGCAGACAGAGTTCCTTGGAGACTGGCCCTGCATTCAGGCAGGGAGCAGAGGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites