CircRNA Information

General Information
circRNA Basic Information
CircID chr8:133474601|133474824
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCCCCTGATTTACAGCCCCCCAGCCATGCAGAGCTCCTCTACTCCCCATTACATCCAGCAGAGGCCACCCTCGGGCTCTTGCACCCGCTGTCCCAGACACCTGCAGTGCATGGTCCTGCTCTTCTCATGGCTGCTGCCTTCTCTGCCTGTGGGTCTCAACTTGAGTCCTGCTGTCTCAGAGACCTCCCTGGTGACCCCATTTACAGAAGCCCCCTCTAAGTTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:133474601|133474824 hsa-miR-214-5p 0 0 1
chr8:133474601|133474824 hsa-miR-214-3p 0 0 1
chr8:133474601|133474824 hsa-miR-380-5p 0 0 1
chr8:133474601|133474824 hsa-miR-380-3p 0 0 1
chr8:133474601|133474824 hsa-miR-335-5p 0 0 1
chr8:133474601|133474824 hsa-miR-335-3p 0 0 1
chr8:133474601|133474824 hsa-miR-522-5p 0 0 1
chr8:133474601|133474824 hsa-miR-522-3p 0 0 1
chr8:133474601|133474824 hsa-miR-591 0 0 1
chr8:133474601|133474824 hsa-miR-593-5p 0 0 1
chr8:133474601|133474824 hsa-miR-593-3p 0 0 1
chr8:133474601|133474824 hsa-miR-637 1 0 1
chr8:133474601|133474824 hsa-miR-657 0 0 1
chr8:133474601|133474824 hsa-miR-708-5p 0 0 1
chr8:133474601|133474824 hsa-miR-708-3p 0 0 1
chr8:133474601|133474824 hsa-miR-877-5p 0 0 1
chr8:133474601|133474824 hsa-miR-877-3p 0 0 1
chr8:133474601|133474824 hsa-miR-939-5p 0 0 1
chr8:133474601|133474824 hsa-miR-939-3p 0 0 1
chr8:133474601|133474824 hsa-miR-1226-5p 0 0 1
chr8:133474601|133474824 hsa-miR-1226-3p 0 0 1
chr8:133474601|133474824 hsa-miR-1231 0 0 1
chr8:133474601|133474824 hsa-miR-1205 0 0 1
chr8:133474601|133474824 hsa-miR-1286 1 0 1
chr8:133474601|133474824 hsa-miR-1287-5p 0 0 1
chr8:133474601|133474824 hsa-miR-1287-3p 0 0 1
chr8:133474601|133474824 hsa-miR-1253 1 0 1
chr8:133474601|133474824 hsa-miR-1321 0 0 1
chr8:133474601|133474824 hsa-miR-769-5p 0 0 1
chr8:133474601|133474824 hsa-miR-615-5p 0 0 1
chr8:133474601|133474824 hsa-miR-28-5p 0 0 1
chr8:133474601|133474824 hsa-miR-1302 0 0 1
chr8:133474601|133474824 hsa-miR-509-3-5p 0 0 1
chr8:133474601|133474824 hsa-miR-509-5p 0 0 1
chr8:133474601|133474824 hsa-miR-1300 0 0 1
chr8:133474601|133474824 hsa-miR-886-3p 0 0 1
chr8:133474601|133474824 hsa-miR-608 1 0 0
chr8:133474601|133474824 hsa-miR-638 1 0 0
chr8:133474601|133474824 hsa-miR-650 1 0 0
chr8:133474601|133474824 hsa-miR-762 1 0 0
chr8:133474601|133474824 hsa-miR-760 1 0 0
chr8:133474601|133474824 hsa-miR-1183 1 0 0
chr8:133474601|133474824 hsa-miR-1293 1 0 0
chr8:133474601|133474824 hsa-miR-3170 1 0 0
chr8:133474601|133474824 hsa-miR-4298 1 0 0
chr8:133474601|133474824 hsa-miR-3665 1 0 0
chr8:133474601|133474824 hsa-miR-3916 1 0 0
chr8:133474601|133474824 hsa-miR-1268b 1 0 0
chr8:133474601|133474824 hsa-miR-4440 1 0 0
chr8:133474601|133474824 hsa-miR-3135b 1 0 0
chr8:133474601|133474824 hsa-miR-4488 1 0 0
chr8:133474601|133474824 hsa-miR-4489 1 0 0
chr8:133474601|133474824 hsa-miR-4706 1 0 0
chr8:133474601|133474824 hsa-miR-4739 1 0 0
chr8:133474601|133474824 hsa-miR-5090 1 0 0
chr8:133474601|133474824 hsa-miR-5194 1 0 0
chr8:133474601|133474824 hsa-miR-5787 1 0 0
chr8:133474601|133474824 hsa-miR-6085 1 0 0
chr8:133474601|133474824 hsa-miR-6132 1 0 0
chr8:133474601|133474824 hsa-miR-8077 1 0 0
chr8:133474601|133474824 hsa-miR-8089 1 0 0
chr8:133474601|133474824 hsa-miR-6825-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6799-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6728-5p 1 0 0
chr8:133474601|133474824 hsa-miR-3692-5p 1 0 0
chr8:133474601|133474824 hsa-miR-3192-5p 1 0 0
chr8:133474601|133474824 hsa-miR-4695-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6806-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6721-5p 1 0 0
chr8:133474601|133474824 hsa-miR-197-5p 1 0 0
chr8:133474601|133474824 hsa-miR-8069 1 0 0
chr8:133474601|133474824 hsa-miR-5589-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6776-5p 1 0 0
chr8:133474601|133474824 hsa-miR-432-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6772-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6796-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6829-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6732-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6805-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6827-5p 1 0 0
chr8:133474601|133474824 hsa-miR-23a-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6770-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6782-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6821-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6810-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6835-5p 1 0 0
chr8:133474601|133474824 hsa-miR-7109-5p 1 0 0
chr8:133474601|133474824 hsa-miR-885-3p 1 0 0
chr8:133474601|133474824 hsa-miR-4764-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6823-5p 1 0 0
chr8:133474601|133474824 hsa-miR-4732-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6824-5p 1 0 0
chr8:133474601|133474824 hsa-miR-3162-5p 1 0 0
chr8:133474601|133474824 hsa-miR-7112-5p 1 0 0
chr8:133474601|133474824 hsa-miR-3158-3p 1 0 0
chr8:133474601|133474824 hsa-miR-3675-5p 1 0 0
chr8:133474601|133474824 hsa-miR-1207-5p 1 0 0
chr8:133474601|133474824 hsa-miR-1273h-5p 1 0 0
chr8:133474601|133474824 hsa-miR-4763-3p 1 0 0
chr8:133474601|133474824 hsa-miR-6769b-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6787-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6812-5p 1 0 0
chr8:133474601|133474824 hsa-miR-1343-5p 1 0 0
chr8:133474601|133474824 hsa-miR-5001-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6726-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6743-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6752-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6756-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6803-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6813-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6842-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6851-5p 1 0 0
chr8:133474601|133474824 hsa-miR-7110-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6763-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6779-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6797-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6808-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6879-5p 1 0 0
chr8:133474601|133474824 hsa-miR-4728-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6836-5p 1 0 0
chr8:133474601|133474824 hsa-miR-10396a-5p 1 0 0
chr8:133474601|133474824 hsa-miR-10396b-5p 1 0 0
chr8:133474601|133474824 hsa-miR-10526-3p 1 0 0
chr8:133474601|133474824 hsa-miR-1237-5p 1 0 0
chr8:133474601|133474824 hsa-miR-328-5p 1 0 0
chr8:133474601|133474824 hsa-miR-4632-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6738-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6777-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6794-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6795-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6846-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6848-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6887-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6889-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6885-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6856-5p 1 0 0
chr8:133474601|133474824 hsa-miR-1914-3p 1 0 0
chr8:133474601|133474824 hsa-miR-4667-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6724-5p 1 0 0
chr8:133474601|133474824 hsa-miR-6762-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr8:133474601|133474824
ORF Type ORF1
Protein Length 46
Nucleotide Length 141
Protein Sequence MHPLSQTPAVHGPALLMAAAFSACGSQLESCCLRDLPGDPIYRSPL
Nucleotide Sequence TTGCACCCGCTGTCCCAGACACCTGCAGTGCATGGTCCTGCTCTTCTCATGGCTGCTGCCTTCTCTGCCTGTGGGTCTCAACTTGAGTCCTGCTGTCTCAGAGACCTCCCTGGTGACCCCATTTACAGAAGCCCCCTCTAA
CircID chr8:133474601|133474824
ORF Type ORF2
Protein Length 73
Nucleotide Length 219
Protein Sequence MIYSPPAMQSSSTPHYIQQRPPSGSCTRCPRHLQCMVLLFSWLLPSLPVGLNLSPAVSETSLVTPFTEAPSKF
Nucleotide Sequence CTGATTTACAGCCCCCCAGCCATGCAGAGCTCCTCTACTCCCCATTACATCCAGCAGAGGCCACCCTCGGGCTCTTGCACCCGCTGTCCCAGACACCTGCAGTGCATGGTCCTGCTCTTCTCATGGCTGCTGCCTTCTCTGCCTGTGGGTCTCAACTTGAGTCCTGCTGTCTCAGAGACCTCCCTGGTGACCCCATTTACAGAAGCCCCCTCTAAGTTT
CircID chr8:133474601|133474824
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MQVSGTAGARARGWPLLDVMGSRGALHGWGAVNQG
Nucleotide Sequence CTGCAGGTGTCTGGGACAGCGGGTGCAAGAGCCCGAGGGTGGCCTCTGCTGGATGTAATGGGGAGTAGAGGAGCTCTGCATGGCTGGGGGGCTGTAAATCAGGGG
CircID chr8:133474601|133474824
ORF Type ORF4
Protein Length 36
Nucleotide Length 111
Protein Sequence MRPTGREGSSHEKSRTMHCRCLGQRVQEPEGGLCWM
Nucleotide Sequence TTGAGACCCACAGGCAGAGAAGGCAGCAGCCATGAGAAGAGCAGGACCATGCACTGCAGGTGTCTGGGACAGCGGGTGCAAGAGCCCGAGGGTGGCCTCTGCTGGATGTAA
CircID chr8:133474601|133474824
ORF Type ORF5
Protein Length 29
Nucleotide Length 90
Protein Sequence MRRAGPCTAGVWDSGCKSPRVASAGCNGE
Nucleotide Sequence ATGAGAAGAGCAGGACCATGCACTGCAGGTGTCTGGGACAGCGGGTGCAAGAGCCCGAGGGTGGCCTCTGCTGGATGTAATGGGGAGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab