CircRNA Information

General Information
circRNA Basic Information
CircID chr8:140516429|140516642
Strand +
CircType exon
Host Gene ENSG00000104472.8;
Algorism CIRI2;
Sequence ACCAGTGGTTGCTAGGGGGCAGGAGAAGAGAGGAACAGAGGAACAGAGGGGAATGTCCTGGGTGGCAGAACTGTCCTATCGATTGGTTACAAAACCATGCATTTGTCAAAATTCACAGACTAGACACTAAAAAGGGTGATTTTACTGAATGTAAATTATAAACTTTTTCATTTTTAAAAAAGAGATAATGAAGGCCAGGCATGGTGGCTCACGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:140516429|140516642 hsa-miR-181c-5p 0 0 1
chr8:140516429|140516642 hsa-miR-181c-3p 0 0 1
chr8:140516429|140516642 hsa-miR-205-5p 0 0 1
chr8:140516429|140516642 hsa-miR-205-3p 0 0 1
chr8:140516429|140516642 hsa-miR-374a-5p 0 0 1
chr8:140516429|140516642 hsa-miR-374a-3p 0 0 1
chr8:140516429|140516642 hsa-miR-181d-5p 0 0 1
chr8:140516429|140516642 hsa-miR-181d-3p 0 0 1
chr8:140516429|140516642 hsa-miR-554 0 0 1
chr8:140516429|140516642 hsa-miR-561-5p 0 0 1
chr8:140516429|140516642 hsa-miR-561-3p 0 0 1
chr8:140516429|140516642 hsa-miR-661 0 0 1
chr8:140516429|140516642 hsa-miR-374b-5p 0 0 1
chr8:140516429|140516642 hsa-miR-374b-3p 0 0 1
chr8:140516429|140516642 hsa-miR-942-5p 0 0 1
chr8:140516429|140516642 hsa-miR-942-3p 0 0 1
chr8:140516429|140516642 hsa-miR-1236-5p 0 0 1
chr8:140516429|140516642 hsa-miR-1236-3p 0 0 1
chr8:140516429|140516642 hsa-miR-1257 0 0 1
chr8:140516429|140516642 hsa-miR-1197 0 0 1
chr8:140516429|140516642 hsa-miR-324-3p 0 0 1
chr8:140516429|140516642 hsa-miR-548c-3p 0 0 1
chr8:140516429|140516642 hsa-miR-105 0 0 1
chr8:140516429|140516642 hsa-miR-181a 0 0 1
chr8:140516429|140516642 hsa-miR-181b 0 0 1
chr8:140516429|140516642 hsa-miR-514 0 0 1
chr8:140516429|140516642 hsa-miR-1254 0 0 1
chr8:140516429|140516642 hsa-miR-1913 1 1 0
chr8:140516429|140516642 hsa-miR-1976 1 1 0
chr8:140516429|140516642 hsa-miR-4313 0 1 0
chr8:140516429|140516642 hsa-miR-4326 1 1 0
chr8:140516429|140516642 hsa-miR-4277 0 1 0
chr8:140516429|140516642 hsa-miR-5708 1 0 0
chr8:140516429|140516642 hsa-miR-6840-3p 0 1 0
chr8:140516429|140516642 hsa-miR-4726-3p 1 0 0
chr8:140516429|140516642 hsa-miR-766-3p 1 0 0
chr8:140516429|140516642 hsa-miR-6892-3p 1 0 0
chr8:140516429|140516642 hsa-miR-6881-3p 1 1 0
chr8:140516429|140516642 hsa-miR-6845-3p 1 0 0
chr8:140516429|140516642 hsa-miR-877-3p 1 1 0
chr8:140516429|140516642 hsa-miR-6772-3p 1 0 0
chr8:140516429|140516642 hsa-miR-1908-3p 1 0 0
chr8:140516429|140516642 hsa-miR-6809-3p 1 1 0
chr8:140516429|140516642 hsa-miR-7111-3p 1 1 0
chr8:140516429|140516642 hsa-miR-6780a-3p 1 1 0
chr8:140516429|140516642 hsa-miR-339-5p 1 0 0
chr8:140516429|140516642 hsa-miR-1237-3p 1 0 0
chr8:140516429|140516642 hsa-miR-5571-3p 1 0 0
chr8:140516429|140516642 hsa-miR-6828-3p 1 0 0
chr8:140516429|140516642 hsa-miR-1238-3p 1 0 0
chr8:140516429|140516642 hsa-miR-6887-3p 1 0 0
chr8:140516429|140516642 hsa-miR-5000-3p 0 1 0
chr8:140516429|140516642 hsa-miR-2276-5p 1 1 0
chr8:140516429|140516642 hsa-miR-6782-3p 1 0 0
chr8:140516429|140516642 hsa-miR-6826-3p 1 1 0
chr8:140516429|140516642 hsa-miR-6886-3p 1 0 0
chr8:140516429|140516642 hsa-miR-5088-3p 1 0 0
chr8:140516429|140516642 hsa-miR-6738-3p 0 1 0
chr8:140516429|140516642 hsa-miR-6795-3p 1 0 0
chr8:140516429|140516642 hsa-miR-1227-3p 1 0 0
chr8:140516429|140516642 hsa-miR-6812-3p 1 0 0
chr8:140516429|140516642 hsa-miR-3127-3p 1 0 0
chr8:140516429|140516642 hsa-miR-320a-5p 1 0 0
chr8:140516429|140516642 hsa-miR-4685-3p 1 0 0
chr8:140516429|140516642 hsa-miR-6754-3p 1 0 0
chr8:140516429|140516642 hsa-miR-6852-3p 1 1 0
chr8:140516429|140516642 hsa-miR-6862-3p 1 0 0
chr8:140516429|140516642 hsa-miR-3059-5p 1 1 0
chr8:140516429|140516642 hsa-miR-4723-3p 1 1 0
chr8:140516429|140516642 hsa-miR-6769b-3p 1 1 0
chr8:140516429|140516642 hsa-miR-6781-3p 1 0 0
chr8:140516429|140516642 hsa-miR-4769-3p 1 0 0
chr8:140516429|140516642 hsa-miR-412-3p 1 0 0
chr8:140516429|140516642 hsa-miR-6874-3p 0 1 0
chr8:140516429|140516642 hsa-miR-3922-3p 0 1 0
chr8:140516429|140516642 hsa-miR-148b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr8:140516429|140516642
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MSWVAELSYRLVTKPCICQNSQTRH
Nucleotide Sequence ATGTCCTGGGTGGCAGAACTGTCCTATCGATTGGTTACAAAACCATGCATTTGTCAAAATTCACAGACTAGACACTAA

CircID chr8:140516429|140516642
ORF Type ORF2
Protein Length 50
Nucleotide Length 153
Protein Sequence MLGGRRREEQRNRGECPGWQNCPIDWLQNHAFVKIHRLDTKKGDFTECKL
Nucleotide Sequence TTGCTAGGGGGCAGGAGAAGAGAGGAACAGAGGAACAGAGGGGAATGTCCTGGGTGGCAGAACTGTCCTATCGATTGGTTACAAAACCATGCATTTGTCAAAATTCACAGACTAGACACTAAAAAGGGTGATTTTACTGAATGTAAATTATAA

CircID chr8:140516429|140516642
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MPGLHYLFFKNEKVYNLHSVKSPFLVSSL
Nucleotide Sequence ATGCCTGGCCTTCATTATCTCTTTTTTAAAAATGAAAAAGTTTATAATTTACATTCAGTAAAATCACCCTTTTTAGTGTCTAGTCTGTGA

CircID chr8:140516429|140516642
ORF Type ORF4
Protein Length 36
Nucleotide Length 108
Protein Sequence MTNAWFCNQSIGQFCHPGHSPLFLCSSLLLPPSNHW
Nucleotide Sequence TTGACAAATGCATGGTTTTGTAACCAATCGATAGGACAGTTCTGCCACCCAGGACATTCCCCTCTGTTCCTCTGTTCCTCTCTTCTCCTGCCCCCTAGCAACCACTGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites